RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 SOX4Q06945 474 aaPredicted RBP8.23□□□□□ -1.09
CNOT2-216ENST00000548939 ZNF423Q2M1K9 1284 aa8.23□□□□□ -1.09
CNOT2-216ENST00000548939 SPRED3Q2MJR0 410 aa8.23□□□□□ -1.09
CNOT2-216ENST00000548939 LCE3BQ5TA77 95 aa8.23□□□□□ -1.09
CNOT2-216ENST00000548939 TCF12Q99081 682 aa8.23□□□□□ -1.09
CNOT2-216ENST00000548939 YIPF2Q9BWQ6 316 aa8.23□□□□□ -1.09
CNOT2-216ENST00000548939 NRSN2Q9GZP1 204 aa8.23□□□□□ -1.09
CNOT2-216ENST00000548939 USTQ9Y2C2 406 aa8.23□□□□□ -1.09
CNOT2-216ENST00000548939 H3BRB1 525 aa8.22□□□□□ -1.09
CNOT2-216ENST00000548939 NEFLP07196 543 aa8.22□□□□□ -1.09
CNOT2-216ENST00000548939 MAOBP27338 520 aa8.22□□□□□ -1.09
CNOT2-216ENST00000548939 GRIA4P48058 902 aa8.22□□□□□ -1.09
CNOT2-216ENST00000548939 CPSF6Q16630 551 aaKnown RBP eCLIP8.22□□□□□ -1.09
CNOT2-216ENST00000548939 GLYCTKQ8IVS8 523 aa8.22□□□□□ -1.09
CNOT2-216ENST00000548939 TUT1Q9H6E5 874 aaKnown RBP8.22□□□□□ -1.09
CNOT2-216ENST00000548939 GOLGA2P5Q9HBQ8 144 aa8.22□□□□□ -1.09
CNOT2-216ENST00000548939 CYP11A1P05108 521 aa8.21□□□□□ -1.1
CNOT2-216ENST00000548939 ADH5P11766 374 aa8.21□□□□□ -1.1
CNOT2-216ENST00000548939 POU4F3Q15319 338 aa8.21□□□□□ -1.1
CNOT2-216ENST00000548939 HP1BP3Q5SSJ5 553 aaPredicted RBP8.21□□□□□ -1.1
CNOT2-216ENST00000548939 FOSL1P15407 271 aa8.2□□□□□ -1.1
CNOT2-216ENST00000548939 SERPINB4P48594 390 aa8.2□□□□□ -1.1
CNOT2-216ENST00000548939 USPL1Q5W0Q7 1092 aa8.2□□□□□ -1.1
CNOT2-216ENST00000548939 SHISA5Q8N114 240 aa8.2□□□□□ -1.1
CNOT2-216ENST00000548939 EZH1Q92800 747 aaPredicted RBP8.2□□□□□ -1.1
CNOT2-216ENST00000548939 METTL22Q9BUU2 404 aaPredicted RBP8.2□□□□□ -1.1
CNOT2-216ENST00000548939 ZFYVE1Q9HBF4 777 aa8.2□□□□□ -1.1
CNOT2-216ENST00000548939 NDUFB5O43674 189 aa8.19□□□□□ -1.1
CNOT2-216ENST00000548939 TXKP42681 527 aa8.19□□□□□ -1.1
CNOT2-216ENST00000548939 KIAA0319Q5VV43 1072 aa8.19□□□□□ -1.1
CNOT2-216ENST00000548939 DDX54Q8TDD1 881 aaKnown RBP8.19□□□□□ -1.1
CNOT2-216ENST00000548939 TBC1D32Q96NH3 1257 aa8.19□□□□□ -1.1
CNOT2-216ENST00000548939 PRKAG2Q9UGJ0 569 aa8.19□□□□□ -1.1
CNOT2-216ENST00000548939 ANGEL1Q9UNK9 670 aaKnown RBP8.19□□□□□ -1.1
CNOT2-216ENST00000548939 CTSBP07858 339 aa8.18□□□□□ -1.1
CNOT2-216ENST00000548939 ADMP35318 185 aa8.18□□□□□ -1.1
CNOT2-216ENST00000548939 PDE3BQ13370 1112 aa8.18□□□□□ -1.1
CNOT2-216ENST00000548939 ECM1Q16610 540 aa8.18□□□□□ -1.1
CNOT2-216ENST00000548939 MSMPQ1L6U9 139 aa8.18□□□□□ -1.1
CNOT2-216ENST00000548939 ZAR1Q86SH2 424 aa8.18□□□□□ -1.1
CNOT2-216ENST00000548939 C14orf37Q86TY3 774 aa8.18□□□□□ -1.1
CNOT2-216ENST00000548939 KRTAP19-1Q8IUB9 90 aa8.18□□□□□ -1.1
CNOT2-216ENST00000548939 FMNL2Q96PY5 1086 aa8.18□□□□□ -1.1
CNOT2-216ENST00000548939 CORO1BQ9BR76 489 aa8.18□□□□□ -1.1
CNOT2-216ENST00000548939 EHD4Q9H223 541 aa8.18□□□□□ -1.1
CNOT2-216ENST00000548939 RAD18Q9NS91 495 aa8.18□□□□□ -1.1
CNOT2-216ENST00000548939 ACTL7BQ9Y614 415 aa8.18□□□□□ -1.1
CNOT2-216ENST00000548939 CPNE3O75131 537 aaKnown RBP8.17□□□□□ -1.1
CNOT2-216ENST00000548939 B3GALT4O96024 378 aa8.17□□□□□ -1.1
CNOT2-216ENST00000548939 RAB6AP20340 208 aa8.17□□□□□ -1.1
CNOT2-216ENST00000548939 ARHGAP4P98171 946 aa8.17□□□□□ -1.1
CNOT2-216ENST00000548939 ORC1Q13415 861 aa8.17□□□□□ -1.1
CNOT2-216ENST00000548939 MAP7Q14244 749 aa8.17□□□□□ -1.1
CNOT2-216ENST00000548939 AKAP4Q5JQC9 854 aa8.17□□□□□ -1.1
CNOT2-216ENST00000548939 DYMQ7RTS9 669 aa8.17□□□□□ -1.1
CNOT2-216ENST00000548939 CYP26A1O43174 497 aa8.16□□□□□ -1.1
CNOT2-216ENST00000548939 NFICP08651 508 aa8.16□□□□□ -1.1
CNOT2-216ENST00000548939 TRIM56Q9BRZ2 755 aaKnown RBP8.16□□□□□ -1.1
CNOT2-216ENST00000548939 ZNF576Q9H609 170 aa8.16□□□□□ -1.1
CNOT2-216ENST00000548939 NPHS2Q9NP85 383 aa8.16□□□□□ -1.1
CNOT2-216ENST00000548939 ADGRE2Q9UHX3 823 aa8.16□□□□□ -1.1
CNOT2-216ENST00000548939 RNF114Q9Y508 228 aa8.16□□□□□ -1.1
CNOT2-216ENST00000548939 FAM170BA6NMN3 283 aa8.15□□□□□ -1.1
CNOT2-216ENST00000548939 ECEL1O95672 775 aa8.15□□□□□ -1.1
CNOT2-216ENST00000548939 ITPKAP23677 461 aa8.15□□□□□ -1.1
CNOT2-216ENST00000548939 ABI1Q8IZP0 508 aa8.15□□□□□ -1.1
CNOT2-216ENST00000548939 FAM129BQ96TA1 746 aa8.15□□□□□ -1.1
CNOT2-216ENST00000548939 CCDC39Q9UFE4 941 aa8.15□□□□□ -1.1
CNOT2-216ENST00000548939 AP4E1Q9UPM8 1137 aa8.15□□□□□ -1.1
CNOT2-216ENST00000548939 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.14□□□□□ -1.11
CNOT2-216ENST00000548939 DUSP27Q5VZP5 1158 aa8.14□□□□□ -1.11
CNOT2-216ENST00000548939 VSIG10LQ86VR7 867 aa8.14□□□□□ -1.11
CNOT2-216ENST00000548939 GATA6Q92908 595 aa8.14□□□□□ -1.11
CNOT2-216ENST00000548939 CITED4Q96RK1 184 aa8.14□□□□□ -1.11
CNOT2-216ENST00000548939 SEMA6CQ9H3T2 930 aa8.14□□□□□ -1.11
CNOT2-216ENST00000548939 FAM105AQ9NUU6 356 aa8.14□□□□□ -1.11
CNOT2-216ENST00000548939 PRNPP04156 253 aa8.13□□□□□ -1.11
CNOT2-216ENST00000548939 ASPAP45381 313 aa8.13□□□□□ -1.11
CNOT2-216ENST00000548939 PDE3AQ14432 1141 aa8.13□□□□□ -1.11
CNOT2-216ENST00000548939 TMC1Q8TDI8 760 aa8.13□□□□□ -1.11
CNOT2-216ENST00000548939 FBXL18Q96ME1 805 aa8.13□□□□□ -1.11
CNOT2-216ENST00000548939 ACSS3Q9H6R3 686 aa8.13□□□□□ -1.11
CNOT2-216ENST00000548939 BSDC1Q9NW68 430 aaPredicted RBP8.13□□□□□ -1.11
CNOT2-216ENST00000548939 GADD45BO75293 160 aaPredicted RBP8.12□□□□□ -1.11
CNOT2-216ENST00000548939 CYP27A1Q02318 531 aa8.12□□□□□ -1.11
CNOT2-216ENST00000548939 PTPN12Q05209 780 aaKnown RBP8.12□□□□□ -1.11
CNOT2-216ENST00000548939 AP3B2Q13367 1082 aa8.12□□□□□ -1.11
CNOT2-216ENST00000548939 CCDC74AQ96AQ1 378 aa8.12□□□□□ -1.11
CNOT2-216ENST00000548939 DNAJC25Q9H1X3 360 aa8.12□□□□□ -1.11
CNOT2-216ENST00000548939 EIF1AYO14602 144 aaKnown RBP8.11□□□□□ -1.11
CNOT2-216ENST00000548939 AOC2O75106 756 aa8.11□□□□□ -1.11
CNOT2-216ENST00000548939 TP53INP2Q8IXH6 220 aa8.11□□□□□ -1.11
CNOT2-216ENST00000548939 NIF3L1Q9GZT8 377 aa8.11□□□□□ -1.11
CNOT2-216ENST00000548939 GSX1Q9H4S2 264 aaPredicted RBP8.11□□□□□ -1.11
CNOT2-216ENST00000548939 LRRC4CQ9HCJ2 640 aa8.11□□□□□ -1.11
CNOT2-216ENST00000548939 ABCB6Q9NP58 842 aa8.11□□□□□ -1.11
CNOT2-216ENST00000548939 GPR182O15218 404 aa8.1□□□□□ -1.11
CNOT2-216ENST00000548939 PRPF40BQ6NWY9 871 aaKnown RBP8.1□□□□□ -1.11
CNOT2-216ENST00000548939 ZNF765Q7L2R6 523 aa8.1□□□□□ -1.11
CNOT2-216ENST00000548939 TXNDC2Q86VQ3 553 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms