RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 TTBK2Q6IQ55 1244 aa6.55□□□□□ -1.36
PTCH1-216ENST00000548379 PDZD3Q86UT5 571 aa6.55□□□□□ -1.36
PTCH1-216ENST00000548379 RASGRP4Q8TDF6 673 aa6.55□□□□□ -1.36
PTCH1-216ENST00000548379 STK35Q8TDR2 534 aa6.55□□□□□ -1.36
PTCH1-216ENST00000548379 SREK1Q8WXA9 508 aaKnown RBP6.55□□□□□ -1.36
PTCH1-216ENST00000548379 OSGEPQ9NPF4 335 aa6.55□□□□□ -1.36
PTCH1-216ENST00000548379 CACNA2D2Q9NY47 1150 aa6.55□□□□□ -1.36
PTCH1-216ENST00000548379 ZNF157P51786 506 aaPredicted RBP6.54□□□□□ -1.36
PTCH1-216ENST00000548379 PAK2Q13177 524 aa6.54□□□□□ -1.36
PTCH1-216ENST00000548379 MAP3K11Q16584 847 aa6.54□□□□□ -1.36
PTCH1-216ENST00000548379 ZNF385CQ66K41 422 aaPredicted RBP6.54□□□□□ -1.36
PTCH1-216ENST00000548379 SCARA3Q6AZY7 606 aa6.54□□□□□ -1.36
PTCH1-216ENST00000548379 CCDC84Q86UT8 332 aaPredicted RBP6.54□□□□□ -1.36
PTCH1-216ENST00000548379 CAPN10Q9HC96 672 aa6.54□□□□□ -1.36
PTCH1-216ENST00000548379 TLR6Q9Y2C9 796 aa6.54□□□□□ -1.36
PTCH1-216ENST00000548379 F6X3S4 739 aa6.53□□□□□ -1.36
PTCH1-216ENST00000548379 LINC01387J3KSC0 135 aa6.53□□□□□ -1.36
PTCH1-216ENST00000548379 EIF4EBP3O60516 100 aaPredicted RBP6.53□□□□□ -1.36
PTCH1-216ENST00000548379 PF4P02776 101 aa6.53□□□□□ -1.36
PTCH1-216ENST00000548379 ARNTP27540 789 aa6.53□□□□□ -1.36
PTCH1-216ENST00000548379 AP3B2Q13367 1082 aa6.53□□□□□ -1.36
PTCH1-216ENST00000548379 CAMK2GQ13555 558 aaPredicted RBP6.53□□□□□ -1.36
PTCH1-216ENST00000548379 SETDB1Q15047 1291 aa6.53□□□□□ -1.36
PTCH1-216ENST00000548379 FBXL19Q6PCT2 694 aa6.53□□□□□ -1.36
PTCH1-216ENST00000548379 WFDC8Q8IUA0 241 aa6.53□□□□□ -1.36
PTCH1-216ENST00000548379 KIAA0825Q8IV33 1275 aa6.53□□□□□ -1.36
PTCH1-216ENST00000548379 SULF2Q8IWU5 870 aa6.53□□□□□ -1.36
PTCH1-216ENST00000548379 TRIM42Q8IWZ5 723 aa6.53□□□□□ -1.36
PTCH1-216ENST00000548379 ZNF296Q8WUU4 475 aaPredicted RBP6.53□□□□□ -1.36
PTCH1-216ENST00000548379 SPON2Q9BUD6 331 aa6.53□□□□□ -1.36
PTCH1-216ENST00000548379 NT5C1AQ9BXI3 368 aa6.53□□□□□ -1.36
PTCH1-216ENST00000548379 CYP8B1Q9UNU6 501 aa6.53□□□□□ -1.36
PTCH1-216ENST00000548379 INPP5FQ9Y2H2 1132 aa6.53□□□□□ -1.36
PTCH1-216ENST00000548379 SAMM50Q9Y512 469 aa6.53□□□□□ -1.36
PTCH1-216ENST00000548379 FAM177BA6PVY3 158 aa6.52□□□□□ -1.37
PTCH1-216ENST00000548379 MINDY4BA8MYZ0 360 aa6.52□□□□□ -1.37
PTCH1-216ENST00000548379 FSCN2O14926 492 aa6.52□□□□□ -1.37
PTCH1-216ENST00000548379 ARHGEF15O94989 841 aa6.52□□□□□ -1.37
PTCH1-216ENST00000548379 C19orf57Q0VDD7 668 aa6.52□□□□□ -1.37
PTCH1-216ENST00000548379 MAP4K3Q8IVH8 894 aa6.52□□□□□ -1.37
PTCH1-216ENST00000548379 GAL3ST3Q96A11 431 aa6.52□□□□□ -1.37
PTCH1-216ENST00000548379 GPRASP2Q96D09 838 aa6.52□□□□□ -1.37
PTCH1-216ENST00000548379 EAF1Q96JC9 268 aaPredicted RBP6.52□□□□□ -1.37
PTCH1-216ENST00000548379 EMILIN2Q9BXX0 1053 aa6.52□□□□□ -1.37
PTCH1-216ENST00000548379 LRRC3Q9BY71 257 aa6.52□□□□□ -1.37
PTCH1-216ENST00000548379 WIPF1O43516 503 aa6.51□□□□□ -1.37
PTCH1-216ENST00000548379 LORP23490 312 aaPredicted RBP6.51□□□□□ -1.37
PTCH1-216ENST00000548379 GNL2Q13823 731 aaKnown RBP6.51□□□□□ -1.37
PTCH1-216ENST00000548379 LRRC14Q15048 493 aa6.51□□□□□ -1.37
PTCH1-216ENST00000548379 SF3A1Q15459 793 aaKnown RBP6.51□□□□□ -1.37
PTCH1-216ENST00000548379 TXNDC11Q6PKC3 985 aa6.51□□□□□ -1.37
PTCH1-216ENST00000548379 DTWD1Q8N5C7 304 aa6.51□□□□□ -1.37
PTCH1-216ENST00000548379 KLHL23Q8NBE8 558 aa6.51□□□□□ -1.37
PTCH1-216ENST00000548379 GALNT11Q8NCW6 608 aa6.51□□□□□ -1.37
PTCH1-216ENST00000548379 DDX54Q8TDD1 881 aaKnown RBP6.51□□□□□ -1.37
PTCH1-216ENST00000548379 DRC1Q96MC2 740 aa6.51□□□□□ -1.37
PTCH1-216ENST00000548379 SUPT16HQ9Y5B9 1047 aaKnown RBP6.51□□□□□ -1.37
PTCH1-216ENST00000548379 PCDHB5Q9Y5E4 795 aa6.51□□□□□ -1.37
PTCH1-216ENST00000548379 ROBO2Q9HCK4 1378 aa6.51□□□□□ -1.37
PTCH1-216ENST00000548379 FAM221AA4D161 298 aa6.5□□□□□ -1.37
PTCH1-216ENST00000548379 DEAF1O75398 565 aaPredicted RBP6.5□□□□□ -1.37
PTCH1-216ENST00000548379 GSTP1P09211 210 aaKnown RBP6.5□□□□□ -1.37
PTCH1-216ENST00000548379 ATF4P18848 351 aaPredicted RBP6.5□□□□□ -1.37
PTCH1-216ENST00000548379 GSTM4Q03013 218 aa6.5□□□□□ -1.37
PTCH1-216ENST00000548379 FAM117BQ6P1L5 589 aa6.5□□□□□ -1.37
PTCH1-216ENST00000548379 LLGL2Q6P1M3 1020 aa6.5□□□□□ -1.37
PTCH1-216ENST00000548379 LINC00114Q6XXX2 140 aa6.5□□□□□ -1.37
PTCH1-216ENST00000548379 FAM196AQ6ZSG2 479 aa6.5□□□□□ -1.37
PTCH1-216ENST00000548379 GRIN3AQ8TCU5 1115 aa6.5□□□□□ -1.37
PTCH1-216ENST00000548379 KLHDC7BQ96G42 594 aa6.5□□□□□ -1.37
PTCH1-216ENST00000548379 SPATA32Q96LK8 384 aa6.5□□□□□ -1.37
PTCH1-216ENST00000548379 TRIM37O94972 964 aa6.49□□□□□ -1.37
PTCH1-216ENST00000548379 F13A1P00488 732 aa6.49□□□□□ -1.37
PTCH1-216ENST00000548379 FGRP09769 529 aa6.49□□□□□ -1.37
PTCH1-216ENST00000548379 SELPP16109 830 aa6.49□□□□□ -1.37
PTCH1-216ENST00000548379 AMPD1P23109 780 aa6.49□□□□□ -1.37
PTCH1-216ENST00000548379 CDC25BP30305 580 aa6.49□□□□□ -1.37
PTCH1-216ENST00000548379 CRKP46108 304 aa6.49□□□□□ -1.37
PTCH1-216ENST00000548379 ARL4DP49703 201 aa6.49□□□□□ -1.37
PTCH1-216ENST00000548379 FAM160A1Q05DH4 1040 aa6.49□□□□□ -1.37
PTCH1-216ENST00000548379 SLITRK4Q8IW52 837 aa6.49□□□□□ -1.37
PTCH1-216ENST00000548379 DMRTC2Q8IXT2 367 aaPredicted RBP6.49□□□□□ -1.37
PTCH1-216ENST00000548379 GOLM1Q8NBJ4 401 aa6.49□□□□□ -1.37
PTCH1-216ENST00000548379 GATAD2BQ8WXI9 593 aa6.49□□□□□ -1.37
PTCH1-216ENST00000548379 TRIM11Q96F44 468 aa6.49□□□□□ -1.37
PTCH1-216ENST00000548379 SEC16BQ96JE7 1060 aa6.49□□□□□ -1.37
PTCH1-216ENST00000548379 KRT82Q9NSB4 513 aa6.49□□□□□ -1.37
PTCH1-216ENST00000548379 PRKAG2Q9UGJ0 569 aa6.49□□□□□ -1.37
PTCH1-216ENST00000548379 ADAM11O75078 769 aa6.48□□□□□ -1.37
PTCH1-216ENST00000548379 CILPO75339 1184 aa6.48□□□□□ -1.37
PTCH1-216ENST00000548379 CYP11A1P05108 521 aa6.48□□□□□ -1.37
PTCH1-216ENST00000548379 CTSBP07858 339 aa6.48□□□□□ -1.37
PTCH1-216ENST00000548379 SOX9P48436 509 aa6.48□□□□□ -1.37
PTCH1-216ENST00000548379 ARID5AQ03989 594 aa6.48□□□□□ -1.37
PTCH1-216ENST00000548379 PTPN11Q06124 597 aaPredicted RBP6.48□□□□□ -1.37
PTCH1-216ENST00000548379 SUZ12Q15022 739 aaKnown RBP6.48□□□□□ -1.37
PTCH1-216ENST00000548379 SNAP47Q5SQN1 464 aa6.48□□□□□ -1.37
PTCH1-216ENST00000548379 MPRIPQ6WCQ1 1025 aa6.48□□□□□ -1.37
PTCH1-216ENST00000548379 BNC2Q6ZN30 1099 aaPredicted RBP6.48□□□□□ -1.37
PTCH1-216ENST00000548379 MCF2L2Q86YR7 1114 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms