RNA–Protein interactions for RNA: ENST00000548126.1

CCDC59-203, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 984 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-203ENST00000548126 CHRNA4P43681 627 aa9.87□□□□□ -0.83
CCDC59-203ENST00000548126 FCHSD1Q86WN1 690 aa9.87□□□□□ -0.83
CCDC59-203ENST00000548126 FSTL1Q12841 308 aa9.86□□□□□ -0.83
CCDC59-203ENST00000548126 ZIC5Q96T25 663 aa9.86□□□□□ -0.83
CCDC59-203ENST00000548126 NEUROD4Q9HD90 331 aa9.86□□□□□ -0.83
CCDC59-203ENST00000548126 TUBGCP6Q96RT7 1819 aa9.86□□□□□ -0.83
CCDC59-203ENST00000548126 LZTS3O60299 673 aaPredicted RBP9.85□□□□□ -0.83
CCDC59-203ENST00000548126 HSPA1AP0DMV8 641 aaKnown RBP9.85□□□□□ -0.83
CCDC59-203ENST00000548126 HSPA1BP0DMV9 641 aaKnown RBP9.85□□□□□ -0.83
CCDC59-203ENST00000548126 GATA4P43694 442 aa9.85□□□□□ -0.83
CCDC59-203ENST00000548126 PCBP4P57723 403 aaKnown RBP9.85□□□□□ -0.83
CCDC59-203ENST00000548126 EML3Q32P44 896 aa9.85□□□□□ -0.83
CCDC59-203ENST00000548126 PRRT3Q5FWE3 981 aa9.85□□□□□ -0.83
CCDC59-203ENST00000548126 PLVAPQ9BX97 442 aa9.85□□□□□ -0.83
CCDC59-203ENST00000548126 GDPD2Q9HCC8 539 aa9.85□□□□□ -0.83
CCDC59-203ENST00000548126 IQSEC3Q9UPP2 1182 aaPredicted RBP9.85□□□□□ -0.83
CCDC59-203ENST00000548126 COL18A1P39060 1754 aa9.85□□□□□ -0.83
CCDC59-203ENST00000548126 COL23A1Q86Y22 540 aaPredicted RBP9.84□□□□□ -0.83
CCDC59-203ENST00000548126 CDK19Q9BWU1 502 aa9.84□□□□□ -0.83
CCDC59-203ENST00000548126 SEMA6BQ9H3T3 888 aa9.84□□□□□ -0.83
CCDC59-203ENST00000548126 NMRK2Q9NPI5 230 aa9.84□□□□□ -0.83
CCDC59-203ENST00000548126 KLF15Q9UIH9 416 aa9.84□□□□□ -0.83
CCDC59-203ENST00000548126 ELOA3CA0A087WX78 387 aaPredicted RBP9.83□□□□□ -0.84
CCDC59-203ENST00000548126 ELOA3DA6NLF2 546 aaPredicted RBP9.83□□□□□ -0.84
CCDC59-203ENST00000548126 TMEM229AB2RXF0 380 aa9.83□□□□□ -0.84
CCDC59-203ENST00000548126 KCNQ4P56696 695 aa9.83□□□□□ -0.84
CCDC59-203ENST00000548126 ELOA3BQ3SY89 546 aa9.83□□□□□ -0.84
CCDC59-203ENST00000548126 MSL1Q68DK7 614 aa9.83□□□□□ -0.84
CCDC59-203ENST00000548126 C16orf71Q8IYS4 520 aaPredicted RBP9.83□□□□□ -0.84
CCDC59-203ENST00000548126 ELOA3Q8NG57 546 aa9.83□□□□□ -0.84
CCDC59-203ENST00000548126 NOD1Q9Y239 953 aa9.83□□□□□ -0.84
CCDC59-203ENST00000548126 GPC6Q9Y625 555 aaPredicted RBP9.83□□□□□ -0.84
CCDC59-203ENST00000548126 IGSF1Q8N6C5 1336 aa9.82□□□□□ -0.84
CCDC59-203ENST00000548126 TNS2Q63HR2 1409 aa9.82□□□□□ -0.84
CCDC59-203ENST00000548126 NEUROD1Q13562 356 aa9.82□□□□□ -0.84
CCDC59-203ENST00000548126 CCDC7Q96M83 1385 aa9.82□□□□□ -0.84
CCDC59-203ENST00000548126 RGPD5Q99666 1765 aa9.81□□□□□ -0.84
CCDC59-203ENST00000548126 ADGRB1O14514 1584 aa9.81□□□□□ -0.84
CCDC59-203ENST00000548126 EFSO43281 561 aa9.81□□□□□ -0.84
CCDC59-203ENST00000548126 DOC2BQ14184 412 aa9.81□□□□□ -0.84
CCDC59-203ENST00000548126 WWC1Q8IX03 1113 aa9.81□□□□□ -0.84
CCDC59-203ENST00000548126 ZNF295-AS1Q8N0V1 137 aa9.81□□□□□ -0.84
CCDC59-203ENST00000548126 TRIM11Q96F44 468 aa9.81□□□□□ -0.84
CCDC59-203ENST00000548126 ARHGEF25Q86VW2 580 aa9.8□□□□□ -0.84
CCDC59-203ENST00000548126 TRPM1Q7Z4N2 1603 aa9.79□□□□□ -0.84
CCDC59-203ENST00000548126 SLIT3O75094 1523 aa9.79□□□□□ -0.84
CCDC59-203ENST00000548126 ABCC6O95255 1503 aa9.79□□□□□ -0.84
CCDC59-203ENST00000548126 SIN3BO75182 1162 aa9.79□□□□□ -0.84
CCDC59-203ENST00000548126 SYT9Q86SS6 491 aa9.79□□□□□ -0.84
CCDC59-203ENST00000548126 NACC1Q96RE7 527 aa9.79□□□□□ -0.84
CCDC59-203ENST00000548126 SCHIP1Q9P0W5 487 aaPredicted RBP9.79□□□□□ -0.84
CCDC59-203ENST00000548126 PCDHGA11Q9Y5H2 935 aa9.79□□□□□ -0.84
CCDC59-203ENST00000548126 PPIP5K1Q6PFW1 1433 aa9.79□□□□□ -0.84
CCDC59-203ENST00000548126 TEAD4Q15561 434 aa9.78□□□□□ -0.84
CCDC59-203ENST00000548126 ZMYM1Q5SVZ6 1142 aa9.78□□□□□ -0.84
CCDC59-203ENST00000548126 NFATC2IPQ8NCF5 419 aa9.78□□□□□ -0.84
CCDC59-203ENST00000548126 ZNF232Q9UNY5 417 aa9.78□□□□□ -0.84
CCDC59-203ENST00000548126 PARP3Q9Y6F1 533 aa9.78□□□□□ -0.84
CCDC59-203ENST00000548126 CPSF1Q10570 1443 aaKnown RBP9.77□□□□□ -0.85
CCDC59-203ENST00000548126 SKIP12755 728 aa9.77□□□□□ -0.85
CCDC59-203ENST00000548126 IL2RBP14784 551 aa9.77□□□□□ -0.85
CCDC59-203ENST00000548126 GTF2IP78347 998 aa9.77□□□□□ -0.85
CCDC59-203ENST00000548126 L3MBTL2Q969R5 705 aa9.77□□□□□ -0.85
CCDC59-203ENST00000548126 CHMP3Q9Y3E7 222 aa9.77□□□□□ -0.85
CCDC59-203ENST00000548126 CICQ96RK0 1608 aaPredicted RBP9.77□□□□□ -0.85
CCDC59-203ENST00000548126 ADARB2-AS1A8MUL3 147 aa9.76□□□□□ -0.85
CCDC59-203ENST00000548126 NOS2P35228 1153 aa9.76□□□□□ -0.85
CCDC59-203ENST00000548126 LRRC69Q6ZNQ3 347 aa9.76□□□□□ -0.85
CCDC59-203ENST00000548126 KCNH5Q8NCM2 988 aa9.76□□□□□ -0.85
CCDC59-203ENST00000548126 SMC1BQ8NDV3 1235 aa9.76□□□□□ -0.85
CCDC59-203ENST00000548126 FLAD1Q8NFF5 587 aa9.76□□□□□ -0.85
CCDC59-203ENST00000548126 MPHOSPH9Q99550 1183 aa9.76□□□□□ -0.85
CCDC59-203ENST00000548126 CCNL1Q9UK58 526 aaPredicted RBP9.76□□□□□ -0.85
CCDC59-203ENST00000548126 HCN2Q9UL51 889 aa9.76□□□□□ -0.85
CCDC59-203ENST00000548126 USP3Q9Y6I4 520 aa9.76□□□□□ -0.85
CCDC59-203ENST00000548126 LY75O60449 1722 aa9.76□□□□□ -0.85
CCDC59-203ENST00000548126 TXLNAP40222 546 aa9.75□□□□□ -0.85
CCDC59-203ENST00000548126 TRIM28Q13263 835 aaKnown RBP9.75□□□□□ -0.85
CCDC59-203ENST00000548126 ARHGAP27Q6ZUM4 889 aa9.75□□□□□ -0.85
CCDC59-203ENST00000548126 PRDM6Q9NQX0 595 aa9.75□□□□□ -0.85
CCDC59-203ENST00000548126 ZNF358Q9NW07 568 aa9.75□□□□□ -0.85
CCDC59-203ENST00000548126 SERTM1A2A2V5 107 aa9.74□□□□□ -0.85
CCDC59-203ENST00000548126 HMGB2P26583 209 aaKnown RBP9.74□□□□□ -0.85
CCDC59-203ENST00000548126 TRIM50Q86XT4 487 aa9.74□□□□□ -0.85
CCDC59-203ENST00000548126 SYTL4Q96C24 671 aaPredicted RBP9.74□□□□□ -0.85
CCDC59-203ENST00000548126 PRDM10Q9NQV6 1147 aa9.74□□□□□ -0.85
CCDC59-203ENST00000548126 NLRP2Q9NX02 1062 aa9.74□□□□□ -0.85
CCDC59-203ENST00000548126 ANKIB1Q9P2G1 1089 aa9.74□□□□□ -0.85
CCDC59-203ENST00000548126 KDM2BQ8NHM5 1336 aa9.74□□□□□ -0.85
CCDC59-203ENST00000548126 PIK3C2AO00443 1686 aa9.74□□□□□ -0.85
CCDC59-203ENST00000548126 M0R082 166 aa9.73□□□□□ -0.85
CCDC59-203ENST00000548126 EML1O00423 815 aa9.73□□□□□ -0.85
CCDC59-203ENST00000548126 MLLT1Q03111 559 aaPredicted RBP9.73□□□□□ -0.85
CCDC59-203ENST00000548126 SLC9A9Q8IVB4 645 aa9.73□□□□□ -0.85
CCDC59-203ENST00000548126 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.73□□□□□ -0.85
CCDC59-203ENST00000548126 ZNF417Q8TAU3 575 aa9.73□□□□□ -0.85
CCDC59-203ENST00000548126 RHPN1Q8TCX5 695 aa9.73□□□□□ -0.85
CCDC59-203ENST00000548126 DDX54Q8TDD1 881 aaKnown RBP9.73□□□□□ -0.85
CCDC59-203ENST00000548126 TNFRSF25Q93038 417 aa9.73□□□□□ -0.85
CCDC59-203ENST00000548126 ZNF587Q96SQ5 575 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms