RNA–Protein interactions for RNA: ENST00000548116.5

SMPDL3B-205, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

TSL 2

Gene SMPDL3B, Length 1,913 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-205ENST00000548116 IL1R1P14778 569 aa16.21■□□□□ 0.19
SMPDL3B-205ENST00000548116 ALX1Q15699 326 aa16.21■□□□□ 0.19
SMPDL3B-205ENST00000548116 ILDR1Q86SU0 546 aaPredicted RBP16.21■□□□□ 0.19
SMPDL3B-205ENST00000548116 ZNF622Q969S3 477 aaKnown RBP eCLIP16.21■□□□□ 0.19
SMPDL3B-205ENST00000548116 NSUN4Q96CB9 384 aaKnown RBP16.21■□□□□ 0.19
SMPDL3B-205ENST00000548116 TCEANC2Q96MN5 208 aa16.21■□□□□ 0.19
SMPDL3B-205ENST00000548116 EPB41L4AQ9HCS5 686 aaPredicted RBP16.21■□□□□ 0.19
SMPDL3B-205ENST00000548116 CD209Q9NNX6 404 aa16.21■□□□□ 0.19
SMPDL3B-205ENST00000548116 SALL1Q9NSC2 1324 aa16.21■□□□□ 0.19
SMPDL3B-205ENST00000548116 PATL2C9JE40 543 aaKnown RBP16.21■□□□□ 0.19
SMPDL3B-205ENST00000548116 PRDX5P30044 214 aa16.21■□□□□ 0.19
SMPDL3B-205ENST00000548116 CHRNA5P30532 468 aa16.21■□□□□ 0.19
SMPDL3B-205ENST00000548116 MECOMQ03112 1051 aa16.21■□□□□ 0.19
SMPDL3B-205ENST00000548116 MIGA1Q8NAN2 632 aa16.21■□□□□ 0.19
SMPDL3B-205ENST00000548116 SLX4Q8IY92 1834 aa16.2■□□□□ 0.18
SMPDL3B-205ENST00000548116 MAST2Q6P0Q8 1798 aa16.2■□□□□ 0.18
SMPDL3B-205ENST00000548116 ZMYM6O95789 1325 aa16.2■□□□□ 0.18
SMPDL3B-205ENST00000548116 GSG1L2A8MUP6 293 aa16.2■□□□□ 0.18
SMPDL3B-205ENST00000548116 C6orf229H3BNL8 230 aa16.2■□□□□ 0.18
SMPDL3B-205ENST00000548116 PRKAB2O43741 272 aa16.2■□□□□ 0.18
SMPDL3B-205ENST00000548116 LARGE1O95461 756 aa16.2■□□□□ 0.18
SMPDL3B-205ENST00000548116 HAND2P61296 217 aa16.2■□□□□ 0.18
SMPDL3B-205ENST00000548116 TOB2Q14106 344 aaPredicted RBP16.2■□□□□ 0.18
SMPDL3B-205ENST00000548116 IMMTQ16891 758 aaKnown RBP16.2■□□□□ 0.18
SMPDL3B-205ENST00000548116 NAA16Q6N069 864 aaPredicted RBP16.2■□□□□ 0.18
SMPDL3B-205ENST00000548116 SLC16A10Q8TF71 515 aa16.2■□□□□ 0.18
SMPDL3B-205ENST00000548116 RIOK1Q9BRS2 568 aaKnown RBP16.2■□□□□ 0.18
SMPDL3B-205ENST00000548116 NBPF3Q9H094 633 aa16.2■□□□□ 0.18
SMPDL3B-205ENST00000548116 C10orf71Q711Q0 1435 aa16.2■□□□□ 0.18
SMPDL3B-205ENST00000548116 MPNDQ8N594 471 aa16.19■□□□□ 0.18
SMPDL3B-205ENST00000548116 WDR66Q8TBY9 1149 aa16.19■□□□□ 0.18
SMPDL3B-205ENST00000548116 INTS4Q96HW7 963 aaKnown RBP16.19■□□□□ 0.18
SMPDL3B-205ENST00000548116 CCDC88AQ3V6T2 1871 aa16.19■□□□□ 0.18
SMPDL3B-205ENST00000548116 APPP05067 770 aa16.19■□□□□ 0.18
SMPDL3B-205ENST00000548116 IFNL3Q8IZI9 196 aa16.19■□□□□ 0.18
SMPDL3B-205ENST00000548116 ANP32EQ9BTT0 268 aa16.19■□□□□ 0.18
SMPDL3B-205ENST00000548116 CWC22Q9HCG8 908 aaKnown RBP16.19■□□□□ 0.18
SMPDL3B-205ENST00000548116 MAGEB6P1A0A0J9YX57 407 aa16.18■□□□□ 0.18
SMPDL3B-205ENST00000548116 HMGB1P09429 215 aaKnown RBP16.18■□□□□ 0.18
SMPDL3B-205ENST00000548116 GNAT2P19087 354 aa16.18■□□□□ 0.18
SMPDL3B-205ENST00000548116 EXOSC10Q01780 885 aaKnown RBP16.18■□□□□ 0.18
SMPDL3B-205ENST00000548116 GRIK5Q16478 980 aa16.18■□□□□ 0.18
SMPDL3B-205ENST00000548116 DHX32Q7L7V1 743 aaKnown RBP16.18■□□□□ 0.18
SMPDL3B-205ENST00000548116 TPCN1Q9ULQ1 816 aa16.18■□□□□ 0.18
SMPDL3B-205ENST00000548116 SLC4A4Q9Y6R1 1079 aa16.18■□□□□ 0.18
SMPDL3B-205ENST00000548116 CHD4Q14839 1912 aa16.18■□□□□ 0.18
SMPDL3B-205ENST00000548116 KIAA1551Q9HCM1 1747 aa16.17■□□□□ 0.18
SMPDL3B-205ENST00000548116 ZNF213O14771 459 aa16.17■□□□□ 0.18
SMPDL3B-205ENST00000548116 DYNLL1P63167 89 aaKnown RBP16.17■□□□□ 0.18
SMPDL3B-205ENST00000548116 NFKBIBQ15653 356 aa16.17■□□□□ 0.18
SMPDL3B-205ENST00000548116 ME3Q16798 604 aa16.17■□□□□ 0.18
SMPDL3B-205ENST00000548116 SPTY2D1Q68D10 685 aaPredicted RBP16.17■□□□□ 0.18
SMPDL3B-205ENST00000548116 DPP8Q6V1X1 898 aaPredicted RBP16.17■□□□□ 0.18
SMPDL3B-205ENST00000548116 ST3GAL1Q11201 340 aa16.17■□□□□ 0.18
SMPDL3B-205ENST00000548116 ANKRD1Q15327 319 aa16.17■□□□□ 0.18
SMPDL3B-205ENST00000548116 TMED8Q6PL24 325 aaPredicted RBP16.17■□□□□ 0.18
SMPDL3B-205ENST00000548116 C7orf43Q8WVR3 580 aa16.17■□□□□ 0.18
SMPDL3B-205ENST00000548116 CNKSR1Q969H4 720 aa16.17■□□□□ 0.18
SMPDL3B-205ENST00000548116 ZSCAN31Q96LW9 406 aaPredicted RBP16.17■□□□□ 0.18
SMPDL3B-205ENST00000548116 DLEC1Q9Y238 1755 aa16.16■□□□□ 0.18
SMPDL3B-205ENST00000548116 RIMBP2O15034 1052 aa16.16■□□□□ 0.18
SMPDL3B-205ENST00000548116 IGSF3O75054 1194 aa16.16■□□□□ 0.18
SMPDL3B-205ENST00000548116 NBR1Q14596 966 aa16.16■□□□□ 0.18
SMPDL3B-205ENST00000548116 RAB3GAP1Q15042 981 aa16.16■□□□□ 0.18
SMPDL3B-205ENST00000548116 Q6ZUG5 572 aa16.16■□□□□ 0.18
SMPDL3B-205ENST00000548116 TBC1D10CQ8IV04 446 aa16.16■□□□□ 0.18
SMPDL3B-205ENST00000548116 SH2B1Q9NRF2 756 aaPredicted RBP16.16■□□□□ 0.18
SMPDL3B-205ENST00000548116 SNED1Q8TER0 1413 aa16.15■□□□□ 0.18
SMPDL3B-205ENST00000548116 LDHBP07195 334 aaKnown RBP16.15■□□□□ 0.18
SMPDL3B-205ENST00000548116 LRRC2Q9BYS8 371 aa16.15■□□□□ 0.18
SMPDL3B-205ENST00000548116 AGXT2Q9BYV1 514 aa16.15■□□□□ 0.18
SMPDL3B-205ENST00000548116 COA1Q9GZY4 146 aa16.15■□□□□ 0.18
SMPDL3B-205ENST00000548116 NAPBQ9H115 298 aa16.15■□□□□ 0.18
SMPDL3B-205ENST00000548116 FAM205AQ6ZU69 1335 aa16.15■□□□□ 0.18
SMPDL3B-205ENST00000548116 MB21D2Q8IYB1 491 aaPredicted RBP16.15■□□□□ 0.18
SMPDL3B-205ENST00000548116 NKX2-3Q8TAU0 364 aa16.15■□□□□ 0.18
SMPDL3B-205ENST00000548116 SDR42E1Q8WUS8 393 aa16.15■□□□□ 0.18
SMPDL3B-205ENST00000548116 TACC3Q9Y6A5 838 aa16.15■□□□□ 0.18
SMPDL3B-205ENST00000548116 DZIP1Q86YF9 867 aaKnown RBP16.14■□□□□ 0.17
SMPDL3B-205ENST00000548116 NACAP1Q9BZK3 213 aa16.14■□□□□ 0.17
SMPDL3B-205ENST00000548116 ZC3H12CQ9C0D7 883 aaKnown RBP16.14■□□□□ 0.17
SMPDL3B-205ENST00000548116 TMX4Q9H1E5 349 aaPredicted RBP16.14■□□□□ 0.17
SMPDL3B-205ENST00000548116 TIAM2Q8IVF5 1701 aa16.14■□□□□ 0.17
SMPDL3B-205ENST00000548116 KIF13BQ9NQT8 1826 aa16.14■□□□□ 0.17
SMPDL3B-205ENST00000548116 ANTXR2P58335 489 aa16.13■□□□□ 0.17
SMPDL3B-205ENST00000548116 PKP1Q13835 747 aa16.13■□□□□ 0.17
SMPDL3B-205ENST00000548116 CHST3Q7LGC8 479 aa16.13■□□□□ 0.17
SMPDL3B-205ENST00000548116 CCDC83Q8IWF9 413 aa16.13■□□□□ 0.17
SMPDL3B-205ENST00000548116 NECAB1Q8N987 351 aa16.13■□□□□ 0.17
SMPDL3B-205ENST00000548116 ZBTB7AO95365 584 aa16.13■□□□□ 0.17
SMPDL3B-205ENST00000548116 TDO2P48775 406 aa16.13■□□□□ 0.17
SMPDL3B-205ENST00000548116 FBXL16Q8N461 479 aa16.13■□□□□ 0.17
SMPDL3B-205ENST00000548116 NCOA7Q8NI08 942 aa16.13■□□□□ 0.17
SMPDL3B-205ENST00000548116 TNPO1Q92973 898 aaKnown RBP16.13■□□□□ 0.17
SMPDL3B-205ENST00000548116 BRF1Q92994 677 aa16.13■□□□□ 0.17
SMPDL3B-205ENST00000548116 RTFDC1Q9BY42 306 aaPredicted RBP16.13■□□□□ 0.17
SMPDL3B-205ENST00000548116 AATFQ9NY61 560 aaKnown RBP eCLIP16.13■□□□□ 0.17
SMPDL3B-205ENST00000548116 ZNF219Q9P2Y4 722 aaPredicted RBP16.13■□□□□ 0.17
SMPDL3B-205ENST00000548116 ZDHHC9Q9Y397 364 aa16.13■□□□□ 0.17
SMPDL3B-205ENST00000548116 KCNA3P22001 575 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms