RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 STK31Q9BXU1 1019 aa17.24■□□□□ 0.35
CCDC59-202ENST00000547758 TAF5LO75529 589 aa17.23■□□□□ 0.35
CCDC59-202ENST00000547758 RBM5P52756 815 aaKnown RBP eCLIP17.23■□□□□ 0.35
CCDC59-202ENST00000547758 GCKRQ14397 625 aa17.23■□□□□ 0.35
CCDC59-202ENST00000547758 TAF1CQ15572 869 aaPredicted RBP17.23■□□□□ 0.35
CCDC59-202ENST00000547758 ZNF804AQ7Z570 1209 aa17.23■□□□□ 0.35
CCDC59-202ENST00000547758 ZFYVE28Q9HCC9 887 aa17.23■□□□□ 0.35
CCDC59-202ENST00000547758 RANBP2P49792 3224 aaKnown RBP17.23■□□□□ 0.35
CCDC59-202ENST00000547758 ANKRD18BA2A2Z9 1011 aa17.22■□□□□ 0.35
CCDC59-202ENST00000547758 CASP7P55210 303 aa17.22■□□□□ 0.35
CCDC59-202ENST00000547758 TNFAIP1Q13829 316 aa17.22■□□□□ 0.35
CCDC59-202ENST00000547758 HELBQ8NG08 1087 aaPredicted RBP17.22■□□□□ 0.35
CCDC59-202ENST00000547758 BRI3BPQ8WY22 251 aa17.22■□□□□ 0.35
CCDC59-202ENST00000547758 JAG2Q9Y219 1238 aa17.22■□□□□ 0.35
CCDC59-202ENST00000547758 CCL15-CCL14A0A0B4J2E2 113 aa17.21■□□□□ 0.35
CCDC59-202ENST00000547758 H0YGN5 161 aa17.21■□□□□ 0.35
CCDC59-202ENST00000547758 CCL15Q16663 113 aa17.21■□□□□ 0.35
CCDC59-202ENST00000547758 G2E3Q7L622 706 aa17.21■□□□□ 0.35
CCDC59-202ENST00000547758 MYCP01106 439 aaPredicted RBP17.2■□□□□ 0.34
CCDC59-202ENST00000547758 GTF2A2P52657 109 aa17.2■□□□□ 0.34
CCDC59-202ENST00000547758 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.2■□□□□ 0.34
CCDC59-202ENST00000547758 OTUD5Q96G74 571 aa17.2■□□□□ 0.34
CCDC59-202ENST00000547758 MYH16Q9H6N6 1097 aa17.2■□□□□ 0.34
CCDC59-202ENST00000547758 VGLL4Q14135 290 aa17.19■□□□□ 0.34
CCDC59-202ENST00000547758 CDAN1Q8IWY9 1227 aa17.19■□□□□ 0.34
CCDC59-202ENST00000547758 FAM43AQ8N2R8 423 aa17.19■□□□□ 0.34
CCDC59-202ENST00000547758 SH3TC2Q8TF17 1288 aa17.19■□□□□ 0.34
CCDC59-202ENST00000547758 ZNF70Q9UC06 446 aaPredicted RBP17.19■□□□□ 0.34
CCDC59-202ENST00000547758 IFIT5Q13325 482 aaKnown RBP17.18■□□□□ 0.34
CCDC59-202ENST00000547758 TSR2Q969E8 191 aaKnown RBP17.18■□□□□ 0.34
CCDC59-202ENST00000547758 TEPSINQ96N21 525 aa17.18■□□□□ 0.34
CCDC59-202ENST00000547758 FAM205AQ6ZU69 1335 aa17.18■□□□□ 0.34
CCDC59-202ENST00000547758 WDHD1O75717 1129 aaPredicted RBP17.17■□□□□ 0.34
CCDC59-202ENST00000547758 MAP3K9P80192 1104 aa17.17■□□□□ 0.34
CCDC59-202ENST00000547758 DDX10Q13206 875 aaKnown RBP17.17■□□□□ 0.34
CCDC59-202ENST00000547758 LINS1Q8NG48 757 aa17.17■□□□□ 0.34
CCDC59-202ENST00000547758 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.17■□□□□ 0.34
CCDC59-202ENST00000547758 ARHGAP39Q9C0H5 1083 aa17.17■□□□□ 0.34
CCDC59-202ENST00000547758 TDRD3Q9H7E2 651 aaKnown RBP17.17■□□□□ 0.34
CCDC59-202ENST00000547758 SERPINA10Q9UK55 444 aa17.17■□□□□ 0.34
CCDC59-202ENST00000547758 TTF2Q9UNY4 1162 aaKnown RBP17.17■□□□□ 0.34
CCDC59-202ENST00000547758 CSADQ9Y600 493 aa17.17■□□□□ 0.34
CCDC59-202ENST00000547758 TLR2O60603 784 aa17.16■□□□□ 0.34
CCDC59-202ENST00000547758 LACTBP83111 547 aaPredicted RBP17.16■□□□□ 0.34
CCDC59-202ENST00000547758 FLIIQ13045 1269 aa17.16■□□□□ 0.34
CCDC59-202ENST00000547758 KIF22Q14807 665 aa17.16■□□□□ 0.34
CCDC59-202ENST00000547758 TWISTNBQ3B726 338 aaPredicted RBP17.16■□□□□ 0.34
CCDC59-202ENST00000547758 MFSD14BQ5SR56 506 aa17.16■□□□□ 0.34
CCDC59-202ENST00000547758 LHX8Q68G74 356 aa17.16■□□□□ 0.34
CCDC59-202ENST00000547758 DNAAF4Q8WXU2 420 aa17.16■□□□□ 0.34
CCDC59-202ENST00000547758 TMEM39BQ9GZU3 492 aa17.16■□□□□ 0.34
CCDC59-202ENST00000547758 CHMP3Q9Y3E7 222 aa17.16■□□□□ 0.34
CCDC59-202ENST00000547758 TCP10L2B9ZVM9 353 aa17.15■□□□□ 0.34
CCDC59-202ENST00000547758 TNNI2P48788 182 aa17.15■□□□□ 0.34
CCDC59-202ENST00000547758 FOXO4P98177 505 aa17.15■□□□□ 0.34
CCDC59-202ENST00000547758 FKBP5Q13451 457 aaPredicted RBP17.15■□□□□ 0.34
CCDC59-202ENST00000547758 DZIP1LQ8IYY4 767 aaKnown RBP17.15■□□□□ 0.34
CCDC59-202ENST00000547758 MGAMO43451 1857 aa17.15■□□□□ 0.34
CCDC59-202ENST00000547758 SPDYE5A6NIY4 337 aa17.14■□□□□ 0.33
CCDC59-202ENST00000547758 PLIN1O60240 522 aa17.14■□□□□ 0.33
CCDC59-202ENST00000547758 GNRH1P01148 92 aa17.14■□□□□ 0.33
CCDC59-202ENST00000547758 CLCN6P51797 869 aa17.14■□□□□ 0.33
CCDC59-202ENST00000547758 ZNF579Q8NAF0 562 aaKnown RBP17.14■□□□□ 0.33
CCDC59-202ENST00000547758 ZCCHC17Q9NP64 241 aaKnown RBP17.14■□□□□ 0.33
CCDC59-202ENST00000547758 CETPP11597 493 aa17.13■□□□□ 0.33
CCDC59-202ENST00000547758 CRKP46108 304 aa17.13■□□□□ 0.33
CCDC59-202ENST00000547758 PRMT2P55345 433 aa17.13■□□□□ 0.33
CCDC59-202ENST00000547758 TDRD7Q8NHU6 1098 aaKnown RBP17.13■□□□□ 0.33
CCDC59-202ENST00000547758 SHISA4Q96DD7 197 aa17.13■□□□□ 0.33
CCDC59-202ENST00000547758 RBM27Q9P2N5 1060 aaKnown RBP17.13■□□□□ 0.33
CCDC59-202ENST00000547758 AK9Q5TCS8 1911 aa17.13■□□□□ 0.33
CCDC59-202ENST00000547758 BTBD19C9JJ37 291 aa17.12■□□□□ 0.33
CCDC59-202ENST00000547758 TAF7LQ5H9L4 462 aa17.12■□□□□ 0.33
CCDC59-202ENST00000547758 LDHAL6AQ6ZMR3 332 aa17.12■□□□□ 0.33
CCDC59-202ENST00000547758 ERO1BQ86YB8 467 aa17.12■□□□□ 0.33
CCDC59-202ENST00000547758 DPF3Q92784 378 aa17.12■□□□□ 0.33
CCDC59-202ENST00000547758 ZNF594Q96JF6 807 aaPredicted RBP17.12■□□□□ 0.33
CCDC59-202ENST00000547758 CNNM1Q9NRU3 951 aa17.12■□□□□ 0.33
CCDC59-202ENST00000547758 SNCAIPQ9Y6H5 919 aa17.12■□□□□ 0.33
CCDC59-202ENST00000547758 MYH13Q9UKX3 1938 aa17.11■□□□□ 0.33
CCDC59-202ENST00000547758 COL6A3P12111 3177 aa17.11■□□□□ 0.33
CCDC59-202ENST00000547758 GYG1P46976 350 aa17.11■□□□□ 0.33
CCDC59-202ENST00000547758 SNAPC2Q13487 334 aa17.11■□□□□ 0.33
CCDC59-202ENST00000547758 MTFR1Q15390 333 aa17.11■□□□□ 0.33
CCDC59-202ENST00000547758 CCDC57Q2TAC2 916 aa17.11■□□□□ 0.33
CCDC59-202ENST00000547758 LMBR1LQ6UX01 489 aa17.11■□□□□ 0.33
CCDC59-202ENST00000547758 LAMA3Q16787 3333 aa17.11■□□□□ 0.33
CCDC59-202ENST00000547758 IRF6O14896 467 aa17.1■□□□□ 0.33
CCDC59-202ENST00000547758 HIBADHP31937 336 aaKnown RBP17.1■□□□□ 0.33
CCDC59-202ENST00000547758 WRNIP1Q96S55 665 aa17.1■□□□□ 0.33
CCDC59-202ENST00000547758 PRKRIP1Q9H875 184 aaPredicted RBP17.1■□□□□ 0.33
CCDC59-202ENST00000547758 ECM2O94769 699 aaPredicted RBP17.09■□□□□ 0.33
CCDC59-202ENST00000547758 PPIL2Q13356 520 aa17.09■□□□□ 0.33
CCDC59-202ENST00000547758 UBE4AQ14139 1066 aa17.09■□□□□ 0.33
CCDC59-202ENST00000547758 EPHA10Q5JZY3 1008 aa17.09■□□□□ 0.33
CCDC59-202ENST00000547758 NKX2-3Q8TAU0 364 aa17.09■□□□□ 0.33
CCDC59-202ENST00000547758 ZKSCAN4Q969J2 545 aaPredicted RBP17.09■□□□□ 0.33
CCDC59-202ENST00000547758 FAM84BQ96KN1 310 aaPredicted RBP17.09■□□□□ 0.33
CCDC59-202ENST00000547758 SRRDQ9UH36 339 aa17.09■□□□□ 0.33
CCDC59-202ENST00000547758 CTGFP29279 349 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms