RNA–Protein interactions for RNA: ENST00000547691.6

CEP290-203, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best) BASIC

Gene CEP290, Length 5,968 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-203ENST00000547691 DNAJB2P25686 324 aa0.65□□□□□ -2.31
CEP290-203ENST00000547691 ARID4AP29374 1257 aaPredicted RBP0.65□□□□□ -2.31
CEP290-203ENST00000547691 CBLBQ13191 982 aa0.65□□□□□ -2.31
CEP290-203ENST00000547691 DSG2Q14126 1118 aa0.65□□□□□ -2.31
CEP290-203ENST00000547691 SLC27A3Q5K4L6 730 aa0.65□□□□□ -2.31
CEP290-203ENST00000547691 AGBL5Q8NDL9 886 aa0.65□□□□□ -2.31
CEP290-203ENST00000547691 CSRNP3Q8WYN3 585 aa0.65□□□□□ -2.31
CEP290-203ENST00000547691 ARXQ96QS3 562 aa0.65□□□□□ -2.31
CEP290-203ENST00000547691 CDCA7Q9BWT1 371 aaPredicted RBP0.65□□□□□ -2.31
CEP290-203ENST00000547691 CFHR5Q9BXR6 569 aa0.65□□□□□ -2.31
CEP290-203ENST00000547691 FREM2Q5SZK8 3169 aa0.65□□□□□ -2.31
CEP290-203ENST00000547691 USP31Q70CQ4 1352 aa0.65□□□□□ -2.31
CEP290-203ENST00000547691 CCDC7Q96M83 1385 aa0.65□□□□□ -2.31
CEP290-203ENST00000547691 ACIN1Q9UKV3 1341 aaKnown RBP0.64□□□□□ -2.31
CEP290-203ENST00000547691 INHBBP09529 407 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 FXR1P51114 621 aaKnown RBP eCLIP0.64□□□□□ -2.31
CEP290-203ENST00000547691 NFIXQ14938 502 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 FAM161AQ3B820 660 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 SSBP4Q9BWG4 385 aaPredicted RBP0.64□□□□□ -2.31
CEP290-203ENST00000547691 NEUROD4Q9HD90 331 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 UTP3Q9NQZ2 479 aaKnown RBP eCLIP0.64□□□□□ -2.316e-9■■■■■ 134.6
CEP290-203ENST00000547691 SAGE1Q9NXZ1 904 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 KMT2EQ8IZD2 1858 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 RIC1Q4ADV7 1423 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 ANKRD50Q9ULJ7 1429 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 ANKRD30AQ9BXX3 1397 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 LTBP3Q9NS15 1303 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 ZNF236Q9UL36 1845 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 A0A1W2PPC1 479 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 SASH1O94885 1247 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 HOXD8P13378 290 aaPredicted RBP0.64□□□□□ -2.31
CEP290-203ENST00000547691 HMGB2P26583 209 aaKnown RBP0.64□□□□□ -2.31
CEP290-203ENST00000547691 VARSP26640 1264 aaKnown RBP0.64□□□□□ -2.31
CEP290-203ENST00000547691 CTCFP49711 727 aaPredicted RBP0.64□□□□□ -2.31
CEP290-203ENST00000547691 GGT6Q6P531 493 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 SMC1BQ8NDV3 1235 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 GTPBP3Q969Y2 492 aaKnown RBP0.64□□□□□ -2.31
CEP290-203ENST00000547691 SUV39H2Q9H5I1 410 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 MAP3K19Q56UN5 1328 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 TCAF2A6NFQ2 919 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 GPR25O00155 361 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 ADRB1P08588 477 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 CAPN2P17655 700 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 KRT32Q14532 448 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 GIGYF2Q6Y7W6 1299 aaKnown RBP0.64□□□□□ -2.31
CEP290-203ENST00000547691 FLCNQ8NFG4 579 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 ACDQ96AP0 544 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 NLRP3Q96P20 1036 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 LMCD1Q9NZU5 365 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 CFDP1Q9UEE9 299 aaPredicted RBP0.64□□□□□ -2.31
CEP290-203ENST00000547691 CACNA1SQ13698 1873 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 ANKRD36BQ8N2N9 1353 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 ZNF644Q9H582 1327 aaPredicted RBP0.64□□□□□ -2.31
CEP290-203ENST00000547691 FOXN1O15353 648 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 CBSLP0DN79 551 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 CTGFP29279 349 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 CBSP35520 551 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 PLA2G5P39877 138 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 SNRPNP63162 240 aaKnown RBP0.64□□□□□ -2.31
CEP290-203ENST00000547691 CPSF6Q16630 551 aaKnown RBP eCLIP0.64□□□□□ -2.31
CEP290-203ENST00000547691 ZNF827Q17R98 1081 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 MPZL3Q6UWV2 235 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 TXNRD3Q86VQ6 643 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 CDV3Q9UKY7 258 aaKnown RBP0.64□□□□□ -2.31
CEP290-203ENST00000547691 PCDHGA10Q9Y5H3 936 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 EMILIN1Q9Y6C2 1016 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 AKAP11Q9UKA4 1901 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 FSTP19883 344 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 NR5A1Q13285 461 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 HABP4Q5JVS0 413 aaKnown RBP0.64□□□□□ -2.31
CEP290-203ENST00000547691 HP1BP3Q5SSJ5 553 aaPredicted RBP0.64□□□□□ -2.31
CEP290-203ENST00000547691 ARHGAP27Q6ZUM4 889 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 LYSMD3Q7Z3D4 306 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 TMEM151BQ8IW70 566 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 ORAI2Q96SN7 254 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 MENTQ9BUN1 341 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 NUCKS1Q9H1E3 243 aaKnown RBP0.64□□□□□ -2.31
CEP290-203ENST00000547691 COL4A3Q01955 1670 aa0.64□□□□□ -2.31
CEP290-203ENST00000547691 PRR36Q9H6K5 1346 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 FAM177BA6PVY3 158 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 KRT10P13645 584 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 CTHP32929 405 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 TGFB2P61812 414 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 RELBQ01201 579 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 PSME1Q06323 249 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 FMR1Q06787 632 aaKnown RBP eCLIP0.63□□□□□ -2.31
CEP290-203ENST00000547691 LINC01559Q495D7 138 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 SPATS1Q496A3 300 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 EFHC2Q5JST6 749 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 NLGN2Q8NFZ4 835 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 DDX12PQ92771 950 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 SLC26A8Q96RN1 970 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 GPBP1L1Q9HC44 474 aaPredicted RBP0.63□□□□□ -2.31
CEP290-203ENST00000547691 OTOFQ9HC10 1997 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 TONSLQ96HA7 1378 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 PLEKHH1Q9ULM0 1364 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 KMT2DO14686 5537 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 SART1O43290 800 aaKnown RBP0.63□□□□□ -2.31
CEP290-203ENST00000547691 CA12O43570 354 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 KCNA3P22001 575 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms