RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 SNRKQ9NRH2 765 aa19.78■□□□□ 0.76
CHMP1A-204ENST00000547687 PAG1Q9NWQ8 432 aa19.78■□□□□ 0.76
CHMP1A-204ENST00000547687 EPHX2P34913 555 aa19.77■□□□□ 0.76
CHMP1A-204ENST00000547687 SCNN1DP51172 638 aa19.77■□□□□ 0.76
CHMP1A-204ENST00000547687 FSTL1Q12841 308 aa19.77■□□□□ 0.76
CHMP1A-204ENST00000547687 BSDC1Q9NW68 430 aaPredicted RBP19.77■□□□□ 0.76
CHMP1A-204ENST00000547687 GGA1Q9UJY5 639 aa19.77■□□□□ 0.76
CHMP1A-204ENST00000547687 CCDC171Q6TFL3 1326 aa19.77■□□□□ 0.76
CHMP1A-204ENST00000547687 SCARF1Q14162 830 aa19.76■□□□□ 0.75
CHMP1A-204ENST00000547687 KCNB2Q92953 911 aa19.76■□□□□ 0.75
CHMP1A-204ENST00000547687 INTS4Q96HW7 963 aaKnown RBP19.76■□□□□ 0.75
CHMP1A-204ENST00000547687 VPS33BQ9H267 617 aa19.76■□□□□ 0.75
CHMP1A-204ENST00000547687 MINPP1Q9UNW1 487 aa19.76■□□□□ 0.75
CHMP1A-204ENST00000547687 A0A0D9SFI3 127 aa19.76■□□□□ 0.75
CHMP1A-204ENST00000547687 BAG4O95429 457 aaKnown RBP19.76■□□□□ 0.75
CHMP1A-204ENST00000547687 NECTIN1Q15223 517 aa19.76■□□□□ 0.75
CHMP1A-204ENST00000547687 KBTBD3Q8NAB2 608 aa19.76■□□□□ 0.75
CHMP1A-204ENST00000547687 PODXL2Q9NZ53 605 aa19.76■□□□□ 0.75
CHMP1A-204ENST00000547687 A0A1B0GUL6 1792 aa19.76■□□□□ 0.75
CHMP1A-204ENST00000547687 GOLGA6L22H0YM25 854 aa19.75■□□□□ 0.75
CHMP1A-204ENST00000547687 ECE2O60344 883 aa19.75■□□□□ 0.75
CHMP1A-204ENST00000547687 PKP1Q13835 747 aa19.75■□□□□ 0.75
CHMP1A-204ENST00000547687 MAP4K1Q92918 833 aa19.75■□□□□ 0.75
CHMP1A-204ENST00000547687 CLEC11AQ9Y240 323 aa19.75■□□□□ 0.75
CHMP1A-204ENST00000547687 ARAP2Q8WZ64 1704 aa19.75■□□□□ 0.75
CHMP1A-204ENST00000547687 XDHP47989 1333 aa19.75■□□□□ 0.75
CHMP1A-204ENST00000547687 SHTN1A0MZ66 631 aa19.75■□□□□ 0.75
CHMP1A-204ENST00000547687 CHGBP05060 677 aa19.75■□□□□ 0.75
CHMP1A-204ENST00000547687 SLC5A1P13866 664 aa19.75■□□□□ 0.75
CHMP1A-204ENST00000547687 GMPSP49915 693 aaPredicted RBP19.75■□□□□ 0.75
CHMP1A-204ENST00000547687 CIAPIN1Q6FI81 312 aa19.75■□□□□ 0.75
CHMP1A-204ENST00000547687 TTC14Q96N46 770 aa19.75■□□□□ 0.75
CHMP1A-204ENST00000547687 ZBTB12Q9Y330 459 aaPredicted RBP19.75■□□□□ 0.75
CHMP1A-204ENST00000547687 RBM8AQ9Y5S9 174 aaKnown RBP19.75■□□□□ 0.75
CHMP1A-204ENST00000547687 AKAP11Q9UKA4 1901 aa19.74■□□□□ 0.75
CHMP1A-204ENST00000547687 KCNJ4P48050 445 aa19.74■□□□□ 0.75
CHMP1A-204ENST00000547687 SKOR2Q2VWA4 1001 aaPredicted RBP19.74■□□□□ 0.75
CHMP1A-204ENST00000547687 CCDC102BQ68D86 513 aa19.74■□□□□ 0.75
CHMP1A-204ENST00000547687 PI16Q6UXB8 463 aa19.74■□□□□ 0.75
CHMP1A-204ENST00000547687 EYA3Q99504 573 aa19.74■□□□□ 0.75
CHMP1A-204ENST00000547687 ZC3H12CQ9C0D7 883 aaKnown RBP19.74■□□□□ 0.75
CHMP1A-204ENST00000547687 GZF1Q9H116 711 aaPredicted RBP19.74■□□□□ 0.75
CHMP1A-204ENST00000547687 ADAMTSL1Q8N6G6 1762 aa19.74■□□□□ 0.75
CHMP1A-204ENST00000547687 CASTP20810 708 aaKnown RBP19.73■□□□□ 0.75
CHMP1A-204ENST00000547687 LMOD1P29536 600 aaPredicted RBP19.73■□□□□ 0.75
CHMP1A-204ENST00000547687 MCAMP43121 646 aa19.73■□□□□ 0.75
CHMP1A-204ENST00000547687 PHKA1P46020 1223 aa19.73■□□□□ 0.75
CHMP1A-204ENST00000547687 RFX7Q2KHR2 1363 aa19.73■□□□□ 0.75
CHMP1A-204ENST00000547687 PSMD14O00487 310 aa19.73■□□□□ 0.75
CHMP1A-204ENST00000547687 ZKSCAN1P17029 563 aaPredicted RBP19.73■□□□□ 0.75
CHMP1A-204ENST00000547687 ZAP70P43403 619 aa19.73■□□□□ 0.75
CHMP1A-204ENST00000547687 CHADLQ6NUI6 762 aa19.73■□□□□ 0.75
CHMP1A-204ENST00000547687 TM6SF1Q9BZW5 370 aa19.73■□□□□ 0.75
CHMP1A-204ENST00000547687 ZDHHC9Q9Y397 364 aa19.73■□□□□ 0.75
CHMP1A-204ENST00000547687 AK2P54819 239 aa19.72■□□□□ 0.75
CHMP1A-204ENST00000547687 CREB3L3Q68CJ9 461 aa19.72■□□□□ 0.75
CHMP1A-204ENST00000547687 ZNF512BQ96KM6 892 aaPredicted RBP19.72■□□□□ 0.75
CHMP1A-204ENST00000547687 JAKMIP1Q96N16 626 aaKnown RBP19.72■□□□□ 0.75
CHMP1A-204ENST00000547687 MED23Q9ULK4 1368 aa19.72■□□□□ 0.75
CHMP1A-204ENST00000547687 G3V3G9 751 aa19.71■□□□□ 0.75
CHMP1A-204ENST00000547687 KLRK1P26718 216 aa19.71■□□□□ 0.75
CHMP1A-204ENST00000547687 APLP1P51693 650 aa19.71■□□□□ 0.75
CHMP1A-204ENST00000547687 DCAF8Q5TAQ9 597 aa19.71■□□□□ 0.75
CHMP1A-204ENST00000547687 MAP1SQ66K74 1059 aaPredicted RBP19.71■□□□□ 0.75
CHMP1A-204ENST00000547687 ARID4AP29374 1257 aaPredicted RBP19.71■□□□□ 0.75
CHMP1A-204ENST00000547687 ADCK5Q3MIX3 580 aa19.71■□□□□ 0.75
CHMP1A-204ENST00000547687 TXNRD3Q86VQ6 643 aa19.71■□□□□ 0.75
CHMP1A-204ENST00000547687 LDHDQ86WU2 507 aa19.71■□□□□ 0.75
CHMP1A-204ENST00000547687 ZSWIM6Q9HCJ5 1215 aa19.71■□□□□ 0.75
CHMP1A-204ENST00000547687 GPRC5DQ9NZD1 345 aa19.71■□□□□ 0.75
CHMP1A-204ENST00000547687 LIMCH1Q9UPQ0 1083 aa19.71■□□□□ 0.75
CHMP1A-204ENST00000547687 ATP2B4P23634 1241 aa19.7■□□□□ 0.74
CHMP1A-204ENST00000547687 SLFNL1Q499Z3 407 aa19.7■□□□□ 0.74
CHMP1A-204ENST00000547687 ZNF589Q86UQ0 364 aaPredicted RBP19.7■□□□□ 0.74
CHMP1A-204ENST00000547687 CYP46A1Q9Y6A2 500 aa19.7■□□□□ 0.74
CHMP1A-204ENST00000547687 PSME4Q14997 1843 aa19.7■□□□□ 0.74
CHMP1A-204ENST00000547687 SLC27A2O14975 620 aa19.69■□□□□ 0.74
CHMP1A-204ENST00000547687 CPA1P15085 419 aa19.69■□□□□ 0.74
CHMP1A-204ENST00000547687 TNIP1Q15025 636 aa19.69■□□□□ 0.74
CHMP1A-204ENST00000547687 VPS53Q5VIR6 699 aa19.69■□□□□ 0.74
CHMP1A-204ENST00000547687 SEC62Q99442 399 aaKnown RBP19.69■□□□□ 0.74
CHMP1A-204ENST00000547687 PDRG1Q9NUG6 133 aa19.69■□□□□ 0.74
CHMP1A-204ENST00000547687 POLR2AP24928 1970 aaKnown RBP19.69■□□□□ 0.74
CHMP1A-204ENST00000547687 UQCRFS1P1P0C7P4 283 aa19.69■□□□□ 0.74
CHMP1A-204ENST00000547687 BCAMP50895 628 aa19.69■□□□□ 0.74
CHMP1A-204ENST00000547687 RNF20Q5VTR2 975 aa19.69■□□□□ 0.74
CHMP1A-204ENST00000547687 MCTP1Q6DN14 999 aa19.69■□□□□ 0.74
CHMP1A-204ENST00000547687 RUFY3Q7L099 469 aa19.69■□□□□ 0.74
CHMP1A-204ENST00000547687 UBE4AQ14139 1066 aa19.68■□□□□ 0.74
CHMP1A-204ENST00000547687 PNMA8AQ86V59 439 aaPredicted RBP19.68■□□□□ 0.74
CHMP1A-204ENST00000547687 FMR1Q06787 632 aaKnown RBP eCLIP19.68■□□□□ 0.74
CHMP1A-204ENST00000547687 TICAM2Q86XR7 235 aa19.68■□□□□ 0.74
CHMP1A-204ENST00000547687 PSMA5P28066 241 aa19.67■□□□□ 0.74
CHMP1A-204ENST00000547687 MCMDC2Q4G0Z9 681 aa19.67■□□□□ 0.74
CHMP1A-204ENST00000547687 HMG20BQ9P0W2 317 aa19.67■□□□□ 0.74
CHMP1A-204ENST00000547687 CNOT7Q9UIV1 285 aaKnown RBP19.67■□□□□ 0.74
CHMP1A-204ENST00000547687 MYO5AQ9Y4I1 1855 aaKnown RBP19.67■□□□□ 0.74
CHMP1A-204ENST00000547687 ZNF804BA4D1E1 1349 aa19.67■□□□□ 0.74
CHMP1A-204ENST00000547687 RNF113AO15541 343 aaKnown RBP19.66■□□□□ 0.74
CHMP1A-204ENST00000547687 BRD1O95696 1058 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms