RNA–Protein interactions for RNA: ENST00000547194.1

HCFC2-203, Transcript of host cell factor C2, humanhuman

TSL 3

Gene HCFC2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-203ENST00000547194 ATP2B4P23634 1241 aa5.79□□□□□ -1.48
HCFC2-203ENST00000547194 CFPP27918 469 aa5.79□□□□□ -1.48
HCFC2-203ENST00000547194 CD96P40200 585 aa5.79□□□□□ -1.48
HCFC2-203ENST00000547194 RAP1GAPP47736 663 aa5.79□□□□□ -1.48
HCFC2-203ENST00000547194 MLANAQ16655 118 aa5.79□□□□□ -1.48
HCFC2-203ENST00000547194 ATG4DQ86TL0 474 aaPredicted RBP5.79□□□□□ -1.48
HCFC2-203ENST00000547194 TMEM40Q8WWA1 233 aa5.79□□□□□ -1.48
HCFC2-203ENST00000547194 GATA6Q92908 595 aa5.79□□□□□ -1.48
HCFC2-203ENST00000547194 FAM84AQ96KN4 292 aa5.79□□□□□ -1.48
HCFC2-203ENST00000547194 TOX2Q96NM4 488 aa5.79□□□□□ -1.48
HCFC2-203ENST00000547194 PDE2AO00408 941 aaPredicted RBP5.78□□□□□ -1.48
HCFC2-203ENST00000547194 SOX1O00570 391 aaPredicted RBP5.78□□□□□ -1.48
HCFC2-203ENST00000547194 ZBTB39O15060 712 aa5.78□□□□□ -1.48
HCFC2-203ENST00000547194 ZAP70P43403 619 aa5.78□□□□□ -1.48
HCFC2-203ENST00000547194 IKBKEQ14164 716 aa5.78□□□□□ -1.48
HCFC2-203ENST00000547194 LCNL1Q6ZST4 164 aa5.78□□□□□ -1.48
HCFC2-203ENST00000547194 WFDC3Q8IUB2 231 aa5.78□□□□□ -1.48
HCFC2-203ENST00000547194 LRRC56Q8IYG6 542 aaPredicted RBP5.78□□□□□ -1.48
HCFC2-203ENST00000547194 LRRN4CLQ8ND94 238 aa5.78□□□□□ -1.48
HCFC2-203ENST00000547194 GLIS3Q8NEA6 775 aa5.78□□□□□ -1.48
HCFC2-203ENST00000547194 FAM13BQ9NYF5 915 aa5.78□□□□□ -1.48
HCFC2-203ENST00000547194 LMCD1Q9NZU5 365 aa5.78□□□□□ -1.48
HCFC2-203ENST00000547194 TMEM63CQ9P1W3 806 aa5.78□□□□□ -1.48
HCFC2-203ENST00000547194 SEPT3Q9UH03 358 aa5.78□□□□□ -1.48
HCFC2-203ENST00000547194 ADAMTS6Q9UKP5 1117 aa5.78□□□□□ -1.48
HCFC2-203ENST00000547194 CD8BP10966 210 aa5.77□□□□□ -1.49
HCFC2-203ENST00000547194 CYP27A1Q02318 531 aa5.77□□□□□ -1.49
HCFC2-203ENST00000547194 SOX4Q06945 474 aaPredicted RBP5.77□□□□□ -1.49
HCFC2-203ENST00000547194 ECM1Q16610 540 aa5.77□□□□□ -1.49
HCFC2-203ENST00000547194 KRTAP19-4Q3LI73 84 aa5.77□□□□□ -1.49
HCFC2-203ENST00000547194 KRTAP5-3Q6L8H2 238 aa5.77□□□□□ -1.49
HCFC2-203ENST00000547194 STK11IPQ8N1F8 1099 aa5.77□□□□□ -1.49
HCFC2-203ENST00000547194 ZSCAN18Q8TBC5 510 aaPredicted RBP5.77□□□□□ -1.49
HCFC2-203ENST00000547194 PI4K2BQ8TCG2 481 aa5.77□□□□□ -1.49
HCFC2-203ENST00000547194 SUGCTQ9HAC7 445 aa5.77□□□□□ -1.49
HCFC2-203ENST00000547194 MBNL3Q9NUK0 354 aaKnown RBP5.77□□□□□ -1.49
HCFC2-203ENST00000547194 ACTL7BQ9Y614 415 aa5.77□□□□□ -1.49
HCFC2-203ENST00000547194 ZSCAN22P10073 491 aaPredicted RBP5.76□□□□□ -1.49
HCFC2-203ENST00000547194 GSTM4Q03013 218 aa5.76□□□□□ -1.49
HCFC2-203ENST00000547194 MESP2Q0VG99 397 aa5.76□□□□□ -1.49
HCFC2-203ENST00000547194 EXOSC6Q5RKV6 272 aaKnown RBP5.76□□□□□ -1.49
HCFC2-203ENST00000547194 DYMQ7RTS9 669 aa5.76□□□□□ -1.49
HCFC2-203ENST00000547194 FAM181AQ8N9Y4 354 aa5.76□□□□□ -1.49
HCFC2-203ENST00000547194 CNTN3Q9P232 1028 aa5.76□□□□□ -1.49
HCFC2-203ENST00000547194 SOX13Q9UN79 622 aa5.76□□□□□ -1.49
HCFC2-203ENST00000547194 TMEM88BA6NKF7 163 aa5.75□□□□□ -1.49
HCFC2-203ENST00000547194 MAP7Q14244 749 aa5.75□□□□□ -1.49
HCFC2-203ENST00000547194 ZNF438Q7Z4V0 828 aa5.75□□□□□ -1.49
HCFC2-203ENST00000547194 ATCAYQ86WG3 371 aa5.75□□□□□ -1.49
HCFC2-203ENST00000547194 PLD6Q8N2A8 252 aaKnown RBP5.75□□□□□ -1.49
HCFC2-203ENST00000547194 ASAP3Q8TDY4 903 aa5.75□□□□□ -1.49
HCFC2-203ENST00000547194 EZH1Q92800 747 aaPredicted RBP5.75□□□□□ -1.49
HCFC2-203ENST00000547194 ELP3Q9H9T3 547 aa5.75□□□□□ -1.49
HCFC2-203ENST00000547194 DZANK1Q9NVP4 752 aa5.75□□□□□ -1.49
HCFC2-203ENST00000547194 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.75□□□□□ -1.49
HCFC2-203ENST00000547194 STIM2Q9P246 746 aa5.75□□□□□ -1.49
HCFC2-203ENST00000547194 DAGLAQ9Y4D2 1042 aa5.75□□□□□ -1.49
HCFC2-203ENST00000547194 NFKBIEO00221 500 aa5.74□□□□□ -1.49
HCFC2-203ENST00000547194 ADH5P11766 374 aa5.74□□□□□ -1.49
HCFC2-203ENST00000547194 FUT4P22083 530 aa5.74□□□□□ -1.49
HCFC2-203ENST00000547194 CES1P23141 567 aa5.74□□□□□ -1.49
HCFC2-203ENST00000547194 AKAP4Q5JQC9 854 aa5.74□□□□□ -1.49
HCFC2-203ENST00000547194 ABTB2Q8N961 1025 aa5.74□□□□□ -1.49
HCFC2-203ENST00000547194 KRTAP9-3Q9BYQ3 159 aa5.74□□□□□ -1.49
HCFC2-203ENST00000547194 SEMA6CQ9H3T2 930 aa5.74□□□□□ -1.49
HCFC2-203ENST00000547194 AP4E1Q9UPM8 1137 aa5.74□□□□□ -1.49
HCFC2-203ENST00000547194 DYNC1LI2O43237 492 aaPredicted RBP5.73□□□□□ -1.49
HCFC2-203ENST00000547194 SSFA2P28290 1259 aa5.73□□□□□ -1.49
HCFC2-203ENST00000547194 C1orf127Q8N9H9 656 aa5.73□□□□□ -1.49
HCFC2-203ENST00000547194 VN1R5Q7Z5H4 357 aa5.72□□□□□ -1.49
HCFC2-203ENST00000547194 C1QL4Q86Z23 238 aa5.72□□□□□ -1.49
HCFC2-203ENST00000547194 CILP2Q8IUL8 1156 aa5.72□□□□□ -1.49
HCFC2-203ENST00000547194 HELQQ8TDG4 1101 aa5.72□□□□□ -1.49
HCFC2-203ENST00000547194 BSNDQ8WZ55 320 aa5.72□□□□□ -1.49
HCFC2-203ENST00000547194 NUDT16Q96DE0 195 aaKnown RBP5.72□□□□□ -1.49
HCFC2-203ENST00000547194 PRDM7Q9NQW5 492 aa5.72□□□□□ -1.49
HCFC2-203ENST00000547194 FAM105AQ9NUU6 356 aa5.72□□□□□ -1.49
HCFC2-203ENST00000547194 SALL4Q9UJQ4 1053 aa5.72□□□□□ -1.49
HCFC2-203ENST00000547194 CARNS1A5YM72 827 aa5.71□□□□□ -1.5
HCFC2-203ENST00000547194 A6NHS1 94 aa5.71□□□□□ -1.5
HCFC2-203ENST00000547194 KCNMB1Q16558 191 aa5.71□□□□□ -1.5
HCFC2-203ENST00000547194 SYDE1Q6ZW31 735 aaPredicted RBP5.71□□□□□ -1.5
HCFC2-203ENST00000547194 ZSWIM9Q86XI8 627 aa5.71□□□□□ -1.5
HCFC2-203ENST00000547194 ANKLE2Q86XL3 938 aa5.71□□□□□ -1.5
HCFC2-203ENST00000547194 EDEM1Q92611 657 aa5.71□□□□□ -1.5
HCFC2-203ENST00000547194 LIN37Q96GY3 246 aaPredicted RBP5.71□□□□□ -1.5
HCFC2-203ENST00000547194 OSMRQ99650 979 aa5.71□□□□□ -1.5
HCFC2-203ENST00000547194 RAD18Q9NS91 495 aa5.71□□□□□ -1.5
HCFC2-203ENST00000547194 ASPAP45381 313 aa5.7□□□□□ -1.5
HCFC2-203ENST00000547194 MTMR3Q13615 1198 aa5.7□□□□□ -1.5
HCFC2-203ENST00000547194 ARHGAP27Q6ZUM4 889 aa5.7□□□□□ -1.5
HCFC2-203ENST00000547194 MISP3Q96FF7 219 aa5.7□□□□□ -1.5
HCFC2-203ENST00000547194 USTQ9Y2C2 406 aa5.7□□□□□ -1.5
HCFC2-203ENST00000547194 ZNF503-AS2A6NEH8 195 aa5.69□□□□□ -1.5
HCFC2-203ENST00000547194 INHBBP09529 407 aa5.69□□□□□ -1.5
HCFC2-203ENST00000547194 MPSTP25325 297 aa5.69□□□□□ -1.5
HCFC2-203ENST00000547194 DNM1Q05193 864 aaKnown RBP5.69□□□□□ -1.5
HCFC2-203ENST00000547194 CDK5R2Q13319 367 aa5.69□□□□□ -1.5
HCFC2-203ENST00000547194 OGFOD3Q6PK18 319 aa5.69□□□□□ -1.5
HCFC2-203ENST00000547194 TTLL10Q6ZVT0 673 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms