RNA–Protein interactions for RNA: ENST00000546882.5

RFX4-207, Transcript of regulatory factor X4, humanhuman

TSL 3

Gene RFX4, Length 660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-207ENST00000546882 WNK4Q96J92 1243 aa11.22□□□□□ -0.61
RFX4-207ENST00000546882 ADAM33Q9BZ11 813 aa11.22□□□□□ -0.61
RFX4-207ENST00000546882 TSPYL4Q9UJ04 414 aa11.22□□□□□ -0.61
RFX4-207ENST00000546882 UNC80Q8N2C7 3258 aa11.21□□□□□ -0.61
RFX4-207ENST00000546882 SSC5DA1L4H1 1573 aa11.21□□□□□ -0.61
RFX4-207ENST00000546882 SPDYE16A6NNV3 312 aaPredicted RBP11.21□□□□□ -0.61
RFX4-207ENST00000546882 ATP5J2-PTCD1G3V325 749 aa11.21□□□□□ -0.61
RFX4-207ENST00000546882 IRS4O14654 1257 aaPredicted RBP11.21□□□□□ -0.61
RFX4-207ENST00000546882 SASH1O94885 1247 aa11.21□□□□□ -0.61
RFX4-207ENST00000546882 GJA5P36382 358 aa11.21□□□□□ -0.61
RFX4-207ENST00000546882 NFE2L2Q16236 605 aa11.21□□□□□ -0.61
RFX4-207ENST00000546882 DMRTA1Q5VZB9 504 aa11.21□□□□□ -0.61
RFX4-207ENST00000546882 DDX12PQ92771 950 aa11.21□□□□□ -0.61
RFX4-207ENST00000546882 ZBED3Q96IU2 234 aaPredicted RBP11.21□□□□□ -0.61
RFX4-207ENST00000546882 PTCH2Q9Y6C5 1203 aa11.21□□□□□ -0.61
RFX4-207ENST00000546882 TESPA1A2RU30 521 aaPredicted RBP11.2□□□□□ -0.62
RFX4-207ENST00000546882 TRIM28Q13263 835 aaKnown RBP11.2□□□□□ -0.62
RFX4-207ENST00000546882 SLC4A8Q2Y0W8 1093 aa11.2□□□□□ -0.62
RFX4-207ENST00000546882 SLC9C1Q4G0N8 1177 aa11.2□□□□□ -0.62
RFX4-207ENST00000546882 PLBD2Q8NHP8 589 aa11.2□□□□□ -0.62
RFX4-207ENST00000546882 XDHP47989 1333 aa11.19□□□□□ -0.62
RFX4-207ENST00000546882 NBPF11Q86T75 865 aa11.19□□□□□ -0.62
RFX4-207ENST00000546882 APOBEC3FQ8IUX4 373 aaKnown RBP11.19□□□□□ -0.62
RFX4-207ENST00000546882 OGFOD1Q8N543 542 aa11.19□□□□□ -0.62
RFX4-207ENST00000546882 UNCXA6NJT0 531 aa11.18□□□□□ -0.62
RFX4-207ENST00000546882 SOX1O00570 391 aaPredicted RBP11.18□□□□□ -0.62
RFX4-207ENST00000546882 MYCP01106 439 aaPredicted RBP11.18□□□□□ -0.62
RFX4-207ENST00000546882 MMRN1Q13201 1228 aa11.18□□□□□ -0.62
RFX4-207ENST00000546882 OTUD7BQ6GQQ9 843 aa11.18□□□□□ -0.62
RFX4-207ENST00000546882 TYW1BQ6NUM6 668 aa11.18□□□□□ -0.62
RFX4-207ENST00000546882 UBE2Q1Q7Z7E8 422 aa11.18□□□□□ -0.62
RFX4-207ENST00000546882 SHISA4Q96DD7 197 aa11.18□□□□□ -0.62
RFX4-207ENST00000546882 DEFB129Q9H1M3 183 aa11.18□□□□□ -0.62
RFX4-207ENST00000546882 CHPF2Q9P2E5 772 aa11.18□□□□□ -0.62
RFX4-207ENST00000546882 ZSWIM8A7E2V4 1837 aa11.18□□□□□ -0.62
RFX4-207ENST00000546882 COL1A1P02452 1464 aaPredicted RBP11.18□□□□□ -0.62
RFX4-207ENST00000546882 MED23Q9ULK4 1368 aa11.17□□□□□ -0.62
RFX4-207ENST00000546882 MYO3BQ8WXR4 1341 aa11.17□□□□□ -0.62
RFX4-207ENST00000546882 ATP2B4P23634 1241 aa11.17□□□□□ -0.62
RFX4-207ENST00000546882 MMP14P50281 582 aa11.17□□□□□ -0.62
RFX4-207ENST00000546882 KRT24Q2M2I5 525 aa11.17□□□□□ -0.62
RFX4-207ENST00000546882 STRIP1Q5VSL9 837 aa11.17□□□□□ -0.62
RFX4-207ENST00000546882 SH3TC2Q8TF17 1288 aa11.17□□□□□ -0.62
RFX4-207ENST00000546882 BABAM1Q9NWV8 329 aa11.17□□□□□ -0.62
RFX4-207ENST00000546882 PTPREP23469 700 aa11.16□□□□□ -0.62
RFX4-207ENST00000546882 TXNRD3Q86VQ6 643 aa11.16□□□□□ -0.62
RFX4-207ENST00000546882 ZBTB38Q8NAP3 1195 aaPredicted RBP11.16□□□□□ -0.62
RFX4-207ENST00000546882 DPF3Q92784 378 aa11.16□□□□□ -0.62
RFX4-207ENST00000546882 FBXW7Q969H0 707 aa11.16□□□□□ -0.62
RFX4-207ENST00000546882 LRCH3Q96II8 777 aa11.16□□□□□ -0.62
RFX4-207ENST00000546882 EPAS1Q99814 870 aa11.16□□□□□ -0.62
RFX4-207ENST00000546882 OTOFQ9HC10 1997 aa11.16□□□□□ -0.62
RFX4-207ENST00000546882 ECM29Q5VYK3 1845 aa11.15□□□□□ -0.62
RFX4-207ENST00000546882 PPP1R12BO60237 982 aaPredicted RBP11.15□□□□□ -0.62
RFX4-207ENST00000546882 USP2O75604 605 aaPredicted RBP11.15□□□□□ -0.62
RFX4-207ENST00000546882 NEFMP07197 916 aa11.15□□□□□ -0.62
RFX4-207ENST00000546882 KIAA0825Q8IV33 1275 aa11.15□□□□□ -0.62
RFX4-207ENST00000546882 TTC28Q96AY4 2481 aa11.15□□□□□ -0.62
RFX4-207ENST00000546882 A0A1W2PPC1 479 aa11.14□□□□□ -0.63
RFX4-207ENST00000546882 NBR1Q14596 966 aa11.14□□□□□ -0.63
RFX4-207ENST00000546882 ARHGEF6Q15052 776 aa11.14□□□□□ -0.63
RFX4-207ENST00000546882 MTFR1Q15390 333 aa11.14□□□□□ -0.63
RFX4-207ENST00000546882 CCDC152Q4G0S7 254 aa11.14□□□□□ -0.63
RFX4-207ENST00000546882 NBPF12Q5TAG4 269 aaPredicted RBP11.14□□□□□ -0.63
RFX4-207ENST00000546882 ADGRD1Q6QNK2 874 aa11.14□□□□□ -0.63
RFX4-207ENST00000546882 ANKRD18AQ8IVF6 992 aa11.14□□□□□ -0.63
RFX4-207ENST00000546882 BRI3BPQ8WY22 251 aa11.14□□□□□ -0.63
RFX4-207ENST00000546882 CCDC85AQ96PX6 553 aaPredicted RBP11.14□□□□□ -0.63
RFX4-207ENST00000546882 ARHGAP39Q9C0H5 1083 aa11.14□□□□□ -0.63
RFX4-207ENST00000546882 COA1Q9GZY4 146 aa11.14□□□□□ -0.63
RFX4-207ENST00000546882 MINPP1Q9UNW1 487 aa11.14□□□□□ -0.63
RFX4-207ENST00000546882 PCDHAC2Q9Y5I4 1007 aa11.14□□□□□ -0.63
RFX4-207ENST00000546882 VCANP13611 3396 aa11.14□□□□□ -0.63
RFX4-207ENST00000546882 ZBTB7BO15156 539 aaPredicted RBP11.13□□□□□ -0.63
RFX4-207ENST00000546882 PDE8AO60658 829 aa11.13□□□□□ -0.63
RFX4-207ENST00000546882 TTLL5Q6EMB2 1281 aa11.13□□□□□ -0.63
RFX4-207ENST00000546882 MTMR14Q8NCE2 650 aa11.13□□□□□ -0.63
RFX4-207ENST00000546882 PPP2R3BQ9Y5P8 575 aa11.13□□□□□ -0.63
RFX4-207ENST00000546882 SPTBN5Q9NRC6 3674 aaKnown RBP11.13□□□□□ -0.63
RFX4-207ENST00000546882 ZNF804BA4D1E1 1349 aa11.12□□□□□ -0.63
RFX4-207ENST00000546882 AOX1Q06278 1338 aa11.12□□□□□ -0.63
RFX4-207ENST00000546882 SPEF2Q9C093 1822 aa11.12□□□□□ -0.63
RFX4-207ENST00000546882 GRXCR2A6NFK2 248 aa11.12□□□□□ -0.63
RFX4-207ENST00000546882 CHL1O00533 1208 aa11.12□□□□□ -0.63
RFX4-207ENST00000546882 PCCAP05165 728 aaPredicted RBP11.12□□□□□ -0.63
RFX4-207ENST00000546882 IREB2P48200 963 aaKnown RBP11.12□□□□□ -0.63
RFX4-207ENST00000546882 CCT4P50991 539 aaKnown RBP11.12□□□□□ -0.63
RFX4-207ENST00000546882 TAF1CQ15572 869 aaPredicted RBP11.12□□□□□ -0.63
RFX4-207ENST00000546882 SUPT20HL1Q3ZLR7 823 aa11.12□□□□□ -0.63
RFX4-207ENST00000546882 ANKRD13AQ8IZ07 590 aa11.12□□□□□ -0.63
RFX4-207ENST00000546882 FAM43AQ8N2R8 423 aa11.12□□□□□ -0.63
RFX4-207ENST00000546882 JARID2Q92833 1246 aaPredicted RBP11.12□□□□□ -0.63
RFX4-207ENST00000546882 OPTNQ96CV9 577 aa11.12□□□□□ -0.63
RFX4-207ENST00000546882 ZFYVE28Q9HCC9 887 aa11.12□□□□□ -0.63
RFX4-207ENST00000546882 BSDC1Q9NW68 430 aaPredicted RBP11.12□□□□□ -0.63
RFX4-207ENST00000546882 TK2O00142 265 aa11.11□□□□□ -0.63
RFX4-207ENST00000546882 HSP90B1P14625 803 aaKnown RBP11.11□□□□□ -0.63
RFX4-207ENST00000546882 KLRK1P26718 216 aa11.11□□□□□ -0.63
RFX4-207ENST00000546882 RIPK4P57078 832 aa11.11□□□□□ -0.63
RFX4-207ENST00000546882 GTF2IP78347 998 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms