RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 ASTN2O75129 1339 aaPredicted RBP20.56■□□□□ 0.88
LTBR-215ENST00000546296 MYO1BO43795 1136 aa20.56■□□□□ 0.88
LTBR-215ENST00000546296 HDLBPQ00341 1268 aaKnown RBP20.56■□□□□ 0.88
LTBR-215ENST00000546296 ANKRD45Q5TZF3 282 aa20.56■□□□□ 0.88
LTBR-215ENST00000546296 TBC1D9Q6ZT07 1266 aa20.56■□□□□ 0.88
LTBR-215ENST00000546296 CDC37L1Q7L3B6 337 aa20.56■□□□□ 0.88
LTBR-215ENST00000546296 USP48Q86UV5 1035 aa20.56■□□□□ 0.88
LTBR-215ENST00000546296 MTMR14Q8NCE2 650 aa20.56■□□□□ 0.88
LTBR-215ENST00000546296 ZNF646O15015 1829 aaPredicted RBP20.55■□□□□ 0.88
LTBR-215ENST00000546296 ITGBL1O95965 494 aaPredicted RBP20.55■□□□□ 0.88
LTBR-215ENST00000546296 PRDX5P30044 214 aa20.55■□□□□ 0.88
LTBR-215ENST00000546296 ERICH6Q7L0X2 663 aa20.55■□□□□ 0.88
LTBR-215ENST00000546296 KRT26Q7Z3Y9 468 aa20.55■□□□□ 0.88
LTBR-215ENST00000546296 DZIP1Q86YF9 867 aaKnown RBP20.55■□□□□ 0.88
LTBR-215ENST00000546296 SULF1Q8IWU6 871 aa20.55■□□□□ 0.88
LTBR-215ENST00000546296 PRMT6Q96LA8 375 aaPredicted RBP20.55■□□□□ 0.88
LTBR-215ENST00000546296 MRIQ9BWK5 157 aa20.55■□□□□ 0.88
LTBR-215ENST00000546296 GLIS2Q9BZE0 524 aaPredicted RBP20.55■□□□□ 0.88
LTBR-215ENST00000546296 LRP2BPQ9P2M1 347 aa20.55■□□□□ 0.88
LTBR-215ENST00000546296 PCDHAC2Q9Y5I4 1007 aa20.55■□□□□ 0.88
LTBR-215ENST00000546296 SPDYE2BA6NHP3 402 aa20.54■□□□□ 0.88
LTBR-215ENST00000546296 IGHDP01880 384 aa20.54■□□□□ 0.88
LTBR-215ENST00000546296 SPDYE6P0CI01 402 aa20.54■□□□□ 0.88
LTBR-215ENST00000546296 ZAP70P43403 619 aa20.54■□□□□ 0.88
LTBR-215ENST00000546296 ZBED3Q96IU2 234 aaPredicted RBP20.54■□□□□ 0.88
LTBR-215ENST00000546296 RAI14Q9P0K7 980 aa20.54■□□□□ 0.88
LTBR-215ENST00000546296 TRAF5O00463 557 aa20.53■□□□□ 0.88
LTBR-215ENST00000546296 SLF2Q8IX21 1173 aa20.53■□□□□ 0.88
LTBR-215ENST00000546296 GPATCH3Q96I76 525 aa20.53■□□□□ 0.88
LTBR-215ENST00000546296 ADAMTSL1Q8N6G6 1762 aa20.53■□□□□ 0.88
LTBR-215ENST00000546296 HSPA6P17066 643 aa20.52■□□□□ 0.88
LTBR-215ENST00000546296 HHIPL2Q6UWX4 724 aa20.52■□□□□ 0.88
LTBR-215ENST00000546296 ZDHHC15Q96MV8 337 aa20.52■□□□□ 0.88
LTBR-215ENST00000546296 PITPNM2Q9BZ72 1349 aa20.52■□□□□ 0.87
LTBR-215ENST00000546296 CLRN2A0PK11 232 aa20.51■□□□□ 0.87
LTBR-215ENST00000546296 ADM5C9JUS6 153 aa20.51■□□□□ 0.87
LTBR-215ENST00000546296 CYP2E1P05181 493 aaPredicted RBP20.51■□□□□ 0.87
LTBR-215ENST00000546296 NEFLP07196 543 aa20.51■□□□□ 0.87
LTBR-215ENST00000546296 APLP1P51693 650 aa20.51■□□□□ 0.87
LTBR-215ENST00000546296 DIXDC1Q155Q3 683 aa20.51■□□□□ 0.87
LTBR-215ENST00000546296 B4GALNT3Q6L9W6 998 aa20.51■□□□□ 0.87
LTBR-215ENST00000546296 TDRD3Q9H7E2 651 aaKnown RBP20.51■□□□□ 0.87
LTBR-215ENST00000546296 VEZTQ9HBM0 779 aa20.51■□□□□ 0.87
LTBR-215ENST00000546296 SCAF8Q9UPN6 1271 aaKnown RBP20.51■□□□□ 0.87
LTBR-215ENST00000546296 NDUFB9Q9Y6M9 179 aa20.51■□□□□ 0.87
LTBR-215ENST00000546296 PASKQ96RG2 1323 aa20.51■□□□□ 0.87
LTBR-215ENST00000546296 ATP5JP18859 108 aa20.5■□□□□ 0.87
LTBR-215ENST00000546296 GSTO1P78417 241 aa20.5■□□□□ 0.87
LTBR-215ENST00000546296 MECOMQ03112 1051 aa20.5■□□□□ 0.87
LTBR-215ENST00000546296 FMR1Q06787 632 aaKnown RBP eCLIP20.5■□□□□ 0.87
LTBR-215ENST00000546296 APOBEC3FQ8IUX4 373 aaKnown RBP20.5■□□□□ 0.87
LTBR-215ENST00000546296 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.5■□□□□ 0.87
LTBR-215ENST00000546296 DNAJC2Q99543 621 aaKnown RBP20.5■□□□□ 0.87
LTBR-215ENST00000546296 BOLA2Q9H3K6 86 aa20.5■□□□□ 0.87
LTBR-215ENST00000546296 ZNF408Q9H9D4 720 aa20.5■□□□□ 0.87
LTBR-215ENST00000546296 ECHDC1Q9NTX5 307 aa20.5■□□□□ 0.87
LTBR-215ENST00000546296 MYH13Q9UKX3 1938 aa20.49■□□□□ 0.87
LTBR-215ENST00000546296 LDHCP07864 332 aa20.49■□□□□ 0.87
LTBR-215ENST00000546296 DLK2Q6UY11 383 aa20.49■□□□□ 0.87
LTBR-215ENST00000546296 SMC5Q8IY18 1101 aa20.49■□□□□ 0.87
LTBR-215ENST00000546296 PIH1D3Q9NQM4 214 aaKnown RBP20.49■□□□□ 0.87
LTBR-215ENST00000546296 ZNF70Q9UC06 446 aaPredicted RBP20.49■□□□□ 0.87
LTBR-215ENST00000546296 TTF1Q15361 905 aaPredicted RBP20.48■□□□□ 0.87
LTBR-215ENST00000546296 APOBEC3HQ6NTF7 200 aaKnown RBP20.48■□□□□ 0.87
LTBR-215ENST00000546296 TMOD2Q9NZR1 351 aa20.48■□□□□ 0.87
LTBR-215ENST00000546296 DAGLAQ9Y4D2 1042 aa20.48■□□□□ 0.87
LTBR-215ENST00000546296 AOX1Q06278 1338 aa20.48■□□□□ 0.87
LTBR-215ENST00000546296 GOLIM4O00461 696 aa20.47■□□□□ 0.87
LTBR-215ENST00000546296 IDH1O75874 414 aaKnown RBP20.47■□□□□ 0.87
LTBR-215ENST00000546296 CELF2O95319 508 aaKnown RBP20.47■□□□□ 0.87
LTBR-215ENST00000546296 SPDYE2Q495Y8 402 aa20.47■□□□□ 0.87
LTBR-215ENST00000546296 NAA16Q6N069 864 aaPredicted RBP20.47■□□□□ 0.87
LTBR-215ENST00000546296 NSUN4Q96CB9 384 aaKnown RBP20.47■□□□□ 0.87
LTBR-215ENST00000546296 TMEM88BA6NKF7 163 aa20.46■□□□□ 0.87
LTBR-215ENST00000546296 CDCA5Q96FF9 252 aa20.46■□□□□ 0.87
LTBR-215ENST00000546296 FAM163AQ96GL9 167 aaPredicted RBP20.46■□□□□ 0.87
LTBR-215ENST00000546296 HAUS7Q99871 368 aa20.46■□□□□ 0.87
LTBR-215ENST00000546296 LNPKQ9C0E8 428 aa20.46■□□□□ 0.87
LTBR-215ENST00000546296 DEFB129Q9H1M3 183 aa20.46■□□□□ 0.87
LTBR-215ENST00000546296 ANTXR1Q9H6X2 564 aa20.46■□□□□ 0.87
LTBR-215ENST00000546296 USP40Q9NVE5 1235 aa20.46■□□□□ 0.87
LTBR-215ENST00000546296 TCP10L2B9ZVM9 353 aa20.45■□□□□ 0.86
LTBR-215ENST00000546296 IGSF3O75054 1194 aa20.45■□□□□ 0.86
LTBR-215ENST00000546296 TNNI2P48788 182 aa20.45■□□□□ 0.86
LTBR-215ENST00000546296 MAP3K12Q12852 859 aa20.45■□□□□ 0.86
LTBR-215ENST00000546296 TNFAIP1Q13829 316 aa20.45■□□□□ 0.86
LTBR-215ENST00000546296 PRAMEF18Q5VWM3 479 aa20.45■□□□□ 0.86
LTBR-215ENST00000546296 TSHZ3Q63HK5 1081 aa20.45■□□□□ 0.86
LTBR-215ENST00000546296 OTUD7AQ8TE49 926 aaPredicted RBP20.45■□□□□ 0.86
LTBR-215ENST00000546296 NOL10Q9BSC4 688 aaKnown RBP20.45■□□□□ 0.86
LTBR-215ENST00000546296 PAG1Q9NWQ8 432 aa20.45■□□□□ 0.86
LTBR-215ENST00000546296 MROH7-TTC4A0A0A0MT08 1334 aa20.45■□□□□ 0.86
LTBR-215ENST00000546296 ERC2O15083 957 aa20.44■□□□□ 0.86
LTBR-215ENST00000546296 MX1P20591 662 aa20.44■□□□□ 0.86
LTBR-215ENST00000546296 CACNB3P54284 484 aa20.44■□□□□ 0.86
LTBR-215ENST00000546296 NUCB1Q02818 461 aa20.44■□□□□ 0.86
LTBR-215ENST00000546296 CST9Q5W186 159 aa20.44■□□□□ 0.86
LTBR-215ENST00000546296 CDC42EP5Q6NZY7 148 aa20.44■□□□□ 0.86
LTBR-215ENST00000546296 CHD1LQ86WJ1 897 aa20.44■□□□□ 0.86
LTBR-215ENST00000546296 CREBZFQ9NS37 354 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms