RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 SYT10Q6XYQ8 523 aa10.13□□□□□ -0.79
TDP1-204ENST00000545686 JMYQ8N9B5 988 aa10.13□□□□□ -0.79
TDP1-204ENST00000545686 ERCC4Q92889 916 aaPredicted RBP10.13□□□□□ -0.79
TDP1-204ENST00000545686 ORAI2Q96SN7 254 aa10.13□□□□□ -0.79
TDP1-204ENST00000545686 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.13□□□□□ -0.79
TDP1-204ENST00000545686 HPS5Q9UPZ3 1129 aa10.13□□□□□ -0.79
TDP1-204ENST00000545686 V9GYY5 206 aaPredicted RBP10.13□□□□□ -0.79
TDP1-204ENST00000545686 MYO5AQ9Y4I1 1855 aaKnown RBP10.12□□□□□ -0.79
TDP1-204ENST00000545686 A0A0G2JLW4 131 aa10.12□□□□□ -0.79
TDP1-204ENST00000545686 KLF18A0A0U1RQI7 1052 aa10.12□□□□□ -0.79
TDP1-204ENST00000545686 A0A1B0GUL7 405 aa10.12□□□□□ -0.79
TDP1-204ENST00000545686 PPP6R2O75170 966 aa10.12□□□□□ -0.79
TDP1-204ENST00000545686 SLC39A14Q15043 492 aa10.12□□□□□ -0.79
TDP1-204ENST00000545686 NCOA7Q8NI08 942 aa10.12□□□□□ -0.79
TDP1-204ENST00000545686 ARGLU1Q9NWB6 273 aaPredicted RBP10.12□□□□□ -0.79
TDP1-204ENST00000545686 ZNF446Q9NWS9 450 aa10.12□□□□□ -0.79
TDP1-204ENST00000545686 MROH7-TTC4A0A0A0MT08 1334 aa10.12□□□□□ -0.79
TDP1-204ENST00000545686 MAP3K15Q6ZN16 1313 aa10.12□□□□□ -0.79
TDP1-204ENST00000545686 ATRNO75882 1429 aa10.12□□□□□ -0.79
TDP1-204ENST00000545686 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.12□□□□□ -0.79
TDP1-204ENST00000545686 CPLX1O14810 134 aa10.12□□□□□ -0.79
TDP1-204ENST00000545686 TPM1P09493 284 aa10.12□□□□□ -0.79
TDP1-204ENST00000545686 TIMM10P62072 90 aa10.12□□□□□ -0.79
TDP1-204ENST00000545686 MYL5Q02045 173 aa10.12□□□□□ -0.79
TDP1-204ENST00000545686 CHST3Q7LGC8 479 aa10.12□□□□□ -0.79
TDP1-204ENST00000545686 KRT28Q7Z3Y7 464 aa10.12□□□□□ -0.79
TDP1-204ENST00000545686 CCDC191Q8NCU4 936 aa10.12□□□□□ -0.79
TDP1-204ENST00000545686 OSBP2Q969R2 916 aa10.12□□□□□ -0.79
TDP1-204ENST00000545686 TMX1Q9H3N1 280 aa10.12□□□□□ -0.79
TDP1-204ENST00000545686 HPSEQ9Y251 543 aa10.12□□□□□ -0.79
TDP1-204ENST00000545686 MYH6P13533 1939 aa10.12□□□□□ -0.79
TDP1-204ENST00000545686 ARAP2Q8WZ64 1704 aa10.11□□□□□ -0.79
TDP1-204ENST00000545686 C1orf167Q5SNV9 1468 aa10.11□□□□□ -0.79
TDP1-204ENST00000545686 ZMYM6O95789 1325 aa10.11□□□□□ -0.79
TDP1-204ENST00000545686 FOXP2O15409 715 aa10.11□□□□□ -0.79
TDP1-204ENST00000545686 CDKL5O76039 1030 aa10.11□□□□□ -0.79
TDP1-204ENST00000545686 POLR3DP05423 398 aaPredicted RBP10.11□□□□□ -0.79
TDP1-204ENST00000545686 TTLL5Q6EMB2 1281 aa10.11□□□□□ -0.79
TDP1-204ENST00000545686 RALYLQ86SE5 291 aaKnown RBP10.11□□□□□ -0.79
TDP1-204ENST00000545686 ELOA2Q8IYF1 753 aaPredicted RBP10.11□□□□□ -0.79
TDP1-204ENST00000545686 APPBP2Q92624 585 aa10.11□□□□□ -0.79
TDP1-204ENST00000545686 FBXW7Q969H0 707 aa10.11□□□□□ -0.79
TDP1-204ENST00000545686 HSD3B7Q9H2F3 369 aa10.11□□□□□ -0.79
TDP1-204ENST00000545686 NLRP2Q9NX02 1062 aa10.11□□□□□ -0.79
TDP1-204ENST00000545686 DNAI1Q9UI46 699 aa10.11□□□□□ -0.79
TDP1-204ENST00000545686 AKAP2Q9Y2D5 859 aa10.11□□□□□ -0.79
TDP1-204ENST00000545686 KCPQ6ZWJ8 1503 aa10.11□□□□□ -0.79
TDP1-204ENST00000545686 GOLGA6L9A6NEM1 432 aa10.11□□□□□ -0.79
TDP1-204ENST00000545686 ZSCAN12O43309 604 aa10.11□□□□□ -0.79
TDP1-204ENST00000545686 IGSF3O75054 1194 aa10.11□□□□□ -0.79
TDP1-204ENST00000545686 SYKP43405 635 aa10.11□□□□□ -0.79
TDP1-204ENST00000545686 ERCC6LQ2NKX8 1250 aa10.11□□□□□ -0.79
TDP1-204ENST00000545686 CCDC158Q5M9N0 1113 aa10.11□□□□□ -0.79
TDP1-204ENST00000545686 LMOD2Q6P5Q4 547 aa10.11□□□□□ -0.79
TDP1-204ENST00000545686 ANKRD36CQ5JPF3 1778 aa10.11□□□□□ -0.79
TDP1-204ENST00000545686 DOCK2Q92608 1830 aa10.1□□□□□ -0.79
TDP1-204ENST00000545686 KIF28PB7ZC32 967 aa10.1□□□□□ -0.79
TDP1-204ENST00000545686 ATP8B1O43520 1251 aa10.1□□□□□ -0.79
TDP1-204ENST00000545686 CLCN6P51797 869 aa10.1□□□□□ -0.79
TDP1-204ENST00000545686 ANTXR2P58335 489 aa10.1□□□□□ -0.79
TDP1-204ENST00000545686 HOMER1Q86YM7 354 aa10.1□□□□□ -0.79
TDP1-204ENST00000545686 VSTM4Q8IW00 320 aa10.1□□□□□ -0.79
TDP1-204ENST00000545686 CCDC9Q9Y3X0 531 aaKnown RBP10.1□□□□□ -0.79
TDP1-204ENST00000545686 FHOD1Q9Y613 1164 aa10.1□□□□□ -0.79
TDP1-204ENST00000545686 TIAM2Q8IVF5 1701 aa10.1□□□□□ -0.79
TDP1-204ENST00000545686 EFCAB8A8MWE9 144 aa10.1□□□□□ -0.79
TDP1-204ENST00000545686 BIN1O00499 593 aa10.1□□□□□ -0.79
TDP1-204ENST00000545686 CYP27B1O15528 508 aa10.1□□□□□ -0.79
TDP1-204ENST00000545686 FGAP02671 866 aa10.1□□□□□ -0.79
TDP1-204ENST00000545686 KCNA4P22459 653 aa10.1□□□□□ -0.79
TDP1-204ENST00000545686 LMOD1P29536 600 aaPredicted RBP10.1□□□□□ -0.79
TDP1-204ENST00000545686 PIP4K2AP48426 406 aaPredicted RBP10.1□□□□□ -0.79
TDP1-204ENST00000545686 UBASH3AP57075 661 aa10.1□□□□□ -0.79
TDP1-204ENST00000545686 LRRC24Q50LG9 513 aa10.1□□□□□ -0.79
TDP1-204ENST00000545686 ARHGAP29Q52LW3 1261 aa10.1□□□□□ -0.79
TDP1-204ENST00000545686 OTUD7BQ6GQQ9 843 aa10.1□□□□□ -0.79
TDP1-204ENST00000545686 TRIM65Q6PJ69 517 aa10.1□□□□□ -0.79
TDP1-204ENST00000545686 RBM33Q96EV2 1170 aaKnown RBP10.1□□□□□ -0.79
TDP1-204ENST00000545686 GPHNQ9NQX3 736 aaPredicted RBP10.1□□□□□ -0.79
TDP1-204ENST00000545686 CEP126Q9P2H0 1117 aa10.1□□□□□ -0.79
TDP1-204ENST00000545686 LRP6O75581 1613 aa10.09□□□□□ -0.79
TDP1-204ENST00000545686 NBPF26B4DH59 902 aa10.09□□□□□ -0.79
TDP1-204ENST00000545686 ARHGAP6O43182 974 aa10.09□□□□□ -0.79
TDP1-204ENST00000545686 WDHD1O75717 1129 aaPredicted RBP10.09□□□□□ -0.79
TDP1-204ENST00000545686 ZRANB2O95218 330 aaKnown RBP eCLIP10.09□□□□□ -0.79
TDP1-204ENST00000545686 CABP4P57796 275 aa10.09□□□□□ -0.79
TDP1-204ENST00000545686 TTC39AQ5SRH9 613 aa10.09□□□□□ -0.79
TDP1-204ENST00000545686 NBPF14Q5TI25 921 aa10.09□□□□□ -0.79
TDP1-204ENST00000545686 RESP18Q5W5W9 173 aa10.09□□□□□ -0.79
TDP1-204ENST00000545686 NBPF10Q6P3W6 841 aaKnown RBP10.09□□□□□ -0.79
TDP1-204ENST00000545686 OLFM4Q6UX06 510 aa10.09□□□□□ -0.79
TDP1-204ENST00000545686 NBPF15Q8N660 670 aa10.09□□□□□ -0.79
TDP1-204ENST00000545686 UBXN4Q92575 508 aa10.09□□□□□ -0.79
TDP1-204ENST00000545686 MPHOSPH8Q99549 860 aa10.09□□□□□ -0.79
TDP1-204ENST00000545686 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.09□□□□□ -0.79
TDP1-204ENST00000545686 SHANK3Q9BYB0 1731 aa10.09□□□□□ -0.79
TDP1-204ENST00000545686 ZNF213O14771 459 aa10.09□□□□□ -0.79
TDP1-204ENST00000545686 CUTAO60888 179 aa10.09□□□□□ -0.79
TDP1-204ENST00000545686 TADA3O75528 432 aa10.09□□□□□ -0.79
TDP1-204ENST00000545686 SERPINC1P01008 464 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms