RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 PDE2AO00408 941 aaPredicted RBP6.48□□□□□ -1.37
SNHG1-222ENST00000545308 ADAMTS4O75173 837 aa6.48□□□□□ -1.37
SNHG1-222ENST00000545308 PRPF40AO75400 957 aaKnown RBP6.48□□□□□ -1.37
SNHG1-222ENST00000545308 TAL1P17542 331 aaPredicted RBP6.48□□□□□ -1.37
SNHG1-222ENST00000545308 CES1P23141 567 aa6.48□□□□□ -1.37
SNHG1-222ENST00000545308 PREPP48147 710 aa6.48□□□□□ -1.37
SNHG1-222ENST00000545308 NLRP12P59046 1061 aa6.48□□□□□ -1.37
SNHG1-222ENST00000545308 BEND4Q6ZU67 534 aa6.48□□□□□ -1.37
SNHG1-222ENST00000545308 DTX1Q86Y01 620 aa6.48□□□□□ -1.37
SNHG1-222ENST00000545308 GJD3Q8N144 294 aa6.48□□□□□ -1.37
SNHG1-222ENST00000545308 EDEM1Q92611 657 aa6.48□□□□□ -1.37
SNHG1-222ENST00000545308 C8orf37Q96NL8 207 aa6.48□□□□□ -1.37
SNHG1-222ENST00000545308 DUSP9Q99956 384 aaKnown RBP6.48□□□□□ -1.37
SNHG1-222ENST00000545308 RUSC1Q9BVN2 902 aa6.48□□□□□ -1.37
SNHG1-222ENST00000545308 NIF3L1Q9GZT8 377 aa6.48□□□□□ -1.37
SNHG1-222ENST00000545308 KCNF1Q9H3M0 494 aa6.48□□□□□ -1.37
SNHG1-222ENST00000545308 PARP2Q9UGN5 583 aa6.48□□□□□ -1.37
SNHG1-222ENST00000545308 HIF3AQ9Y2N7 669 aa6.48□□□□□ -1.37
SNHG1-222ENST00000545308 BTBD11A6QL63 1104 aa6.47□□□□□ -1.37
SNHG1-222ENST00000545308 TXKP42681 527 aa6.47□□□□□ -1.37
SNHG1-222ENST00000545308 HDLBPQ00341 1268 aaKnown RBP6.47□□□□□ -1.37
SNHG1-222ENST00000545308 DNM1Q05193 864 aaKnown RBP6.47□□□□□ -1.37
SNHG1-222ENST00000545308 PDE3BQ13370 1112 aa6.47□□□□□ -1.37
SNHG1-222ENST00000545308 SHKBP1Q8TBC3 707 aa6.47□□□□□ -1.37
SNHG1-222ENST00000545308 HHIPQ96QV1 700 aa6.47□□□□□ -1.37
SNHG1-222ENST00000545308 KRTAP9-9Q9BYP9 154 aa6.47□□□□□ -1.37
SNHG1-222ENST00000545308 KRTAP9-4Q9BYQ2 154 aa6.47□□□□□ -1.37
SNHG1-222ENST00000545308 GGNBP2Q9H3C7 697 aa6.47□□□□□ -1.37
SNHG1-222ENST00000545308 SOX13Q9UN79 622 aa6.47□□□□□ -1.37
SNHG1-222ENST00000545308 MEGF11A6BM72 1044 aa6.46□□□□□ -1.38
SNHG1-222ENST00000545308 TRPA1O75762 1119 aa6.46□□□□□ -1.38
SNHG1-222ENST00000545308 PDGFAP04085 211 aa6.46□□□□□ -1.38
SNHG1-222ENST00000545308 PCSK2P16519 638 aa6.46□□□□□ -1.38
SNHG1-222ENST00000545308 MZF1P28698 734 aaPredicted RBP6.46□□□□□ -1.38
SNHG1-222ENST00000545308 C9orf131Q5VYM1 1079 aa6.46□□□□□ -1.38
SNHG1-222ENST00000545308 FDX2Q6P4F2 183 aa6.46□□□□□ -1.38
SNHG1-222ENST00000545308 SLC7A3Q8WY07 619 aa6.46□□□□□ -1.38
SNHG1-222ENST00000545308 PMEPA1Q969W9 287 aa6.46□□□□□ -1.38
SNHG1-222ENST00000545308 CHRDQ9H2X0 955 aa6.46□□□□□ -1.38
SNHG1-222ENST00000545308 SCAMP3O14828 347 aaKnown RBP6.45□□□□□ -1.38
SNHG1-222ENST00000545308 ARL4DP49703 201 aa6.45□□□□□ -1.38
SNHG1-222ENST00000545308 DAB2P98082 770 aa6.45□□□□□ -1.38
SNHG1-222ENST00000545308 XPCQ01831 940 aaPredicted RBP6.45□□□□□ -1.38
SNHG1-222ENST00000545308 C19orf57Q0VDD7 668 aa6.45□□□□□ -1.38
SNHG1-222ENST00000545308 ENOX2Q16206 610 aaKnown RBP6.45□□□□□ -1.38
SNHG1-222ENST00000545308 C8orf34Q49A92 452 aa6.45□□□□□ -1.38
SNHG1-222ENST00000545308 HGSNATQ68CP4 663 aa6.45□□□□□ -1.38
SNHG1-222ENST00000545308 TMC4Q7Z404 712 aa6.45□□□□□ -1.38
SNHG1-222ENST00000545308 TMEM102Q8N9M5 508 aaPredicted RBP6.45□□□□□ -1.38
SNHG1-222ENST00000545308 PNMA6FA0A0J9YX94 578 aa6.44□□□□□ -1.38
SNHG1-222ENST00000545308 A6NHS1 94 aa6.44□□□□□ -1.38
SNHG1-222ENST00000545308 WNT11O96014 354 aa6.44□□□□□ -1.38
SNHG1-222ENST00000545308 ZC3H6P61129 1189 aaKnown RBP6.44□□□□□ -1.38
SNHG1-222ENST00000545308 TTC16Q8NEE8 873 aa6.44□□□□□ -1.38
SNHG1-222ENST00000545308 NXPE3Q969Y0 559 aa6.44□□□□□ -1.38
SNHG1-222ENST00000545308 BCL11AQ9H165 835 aa6.44□□□□□ -1.38
SNHG1-222ENST00000545308 WDR64B1ANS9 1081 aa6.43□□□□□ -1.38
SNHG1-222ENST00000545308 SOX1O00570 391 aaPredicted RBP6.43□□□□□ -1.38
SNHG1-222ENST00000545308 GAS2O43903 313 aaKnown RBP6.43□□□□□ -1.38
SNHG1-222ENST00000545308 MAP4P27816 1152 aaKnown RBP6.43□□□□□ -1.38
SNHG1-222ENST00000545308 ERCC5P28715 1186 aaPredicted RBP6.43□□□□□ -1.38
SNHG1-222ENST00000545308 NAALADL2Q58DX5 795 aa6.43□□□□□ -1.38
SNHG1-222ENST00000545308 METTL16Q86W50 562 aaKnown RBP6.43□□□□□ -1.38
SNHG1-222ENST00000545308 BSNDQ8WZ55 320 aa6.43□□□□□ -1.38
SNHG1-222ENST00000545308 MFSD14AQ96MC6 490 aa6.43□□□□□ -1.38
SNHG1-222ENST00000545308 OSMRQ99650 979 aa6.43□□□□□ -1.38
SNHG1-222ENST00000545308 TMPRSS13Q9BYE2 586 aa6.43□□□□□ -1.38
SNHG1-222ENST00000545308 SORBS3O60504 671 aa6.42□□□□□ -1.38
SNHG1-222ENST00000545308 USP5P45974 858 aa6.42□□□□□ -1.38
SNHG1-222ENST00000545308 FGD1P98174 961 aa6.42□□□□□ -1.38
SNHG1-222ENST00000545308 ATP2B2Q01814 1243 aa6.42□□□□□ -1.38
SNHG1-222ENST00000545308 RAD51AP2Q09MP3 1159 aa6.42□□□□□ -1.38
SNHG1-222ENST00000545308 PSMD2Q13200 908 aa6.42□□□□□ -1.38
SNHG1-222ENST00000545308 ORC1Q13415 861 aa6.42□□□□□ -1.38
SNHG1-222ENST00000545308 IKBKEQ14164 716 aa6.42□□□□□ -1.38
SNHG1-222ENST00000545308 VN1R5Q7Z5H4 357 aa6.42□□□□□ -1.38
SNHG1-222ENST00000545308 TMEM87AQ8NBN3 555 aa6.42□□□□□ -1.38
SNHG1-222ENST00000545308 SREK1Q8WXA9 508 aaKnown RBP6.42□□□□□ -1.38
SNHG1-222ENST00000545308 ZKSCAN3Q9BRR0 538 aa6.42□□□□□ -1.38
SNHG1-222ENST00000545308 EREGO14944 169 aa6.41□□□□□ -1.38
SNHG1-222ENST00000545308 HOXA10P31260 410 aaPredicted RBP6.41□□□□□ -1.38
SNHG1-222ENST00000545308 SGO2Q562F6 1265 aa6.41□□□□□ -1.38
SNHG1-222ENST00000545308 NUTM2GQ5VZR2 741 aa6.41□□□□□ -1.38
SNHG1-222ENST00000545308 ALG1LQ6GMV1 187 aa6.41□□□□□ -1.38
SNHG1-222ENST00000545308 C12orf50Q8NA57 414 aaPredicted RBP6.41□□□□□ -1.38
SNHG1-222ENST00000545308 SMG8Q8ND04 991 aaKnown RBP6.41□□□□□ -1.38
SNHG1-222ENST00000545308 GIMAP7Q8NHV1 300 aa6.41□□□□□ -1.38
SNHG1-222ENST00000545308 CSRNP1Q96S65 589 aa6.41□□□□□ -1.38
SNHG1-222ENST00000545308 SUGCTQ9HAC7 445 aa6.41□□□□□ -1.38
SNHG1-222ENST00000545308 CYP4F12Q9HCS2 524 aa6.41□□□□□ -1.38
SNHG1-222ENST00000545308 MRS2Q9HD23 443 aa6.41□□□□□ -1.38
SNHG1-222ENST00000545308 PIM2Q9P1W9 311 aa6.41□□□□□ -1.38
SNHG1-222ENST00000545308 VTI1BQ9UEU0 232 aa6.41□□□□□ -1.38
SNHG1-222ENST00000545308 RNF114Q9Y508 228 aa6.41□□□□□ -1.38
SNHG1-222ENST00000545308 LOC100289279A0A1B0GTE1 492 aa6.4□□□□□ -1.38
SNHG1-222ENST00000545308 PHACTR2O75167 634 aa6.4□□□□□ -1.38
SNHG1-222ENST00000545308 TNFRSF21O75509 655 aa6.4□□□□□ -1.38
SNHG1-222ENST00000545308 TIAF1O95411 115 aa6.4□□□□□ -1.38
SNHG1-222ENST00000545308 EDN3P14138 238 aa6.4□□□□□ -1.38
SNHG1-222ENST00000545308 FANCCQ00597 558 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms