RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 DENND2CQ68D51 928 aa9.66□□□□□ -0.86
ATXN3-216ENST00000545170 CROCCP2Q86T23 111 aa9.66□□□□□ -0.86
ATXN3-216ENST00000545170 CEP70Q8NHQ1 597 aa9.66□□□□□ -0.86
ATXN3-216ENST00000545170 TCP11Q8WWU5 503 aa9.66□□□□□ -0.86
ATXN3-216ENST00000545170 PFDN4Q9NQP4 134 aa9.66□□□□□ -0.86
ATXN3-216ENST00000545170 PSMA7O14818 248 aa9.66□□□□□ -0.86
ATXN3-216ENST00000545170 METAP2P50579 478 aaKnown RBP eCLIP9.66□□□□□ -0.86
ATXN3-216ENST00000545170 PDCD2Q16342 344 aaPredicted RBP9.66□□□□□ -0.86
ATXN3-216ENST00000545170 DHX58Q96C10 678 aa9.66□□□□□ -0.86
ATXN3-216ENST00000545170 EIF2AQ9BY44 585 aaKnown RBP9.66□□□□□ -0.86
ATXN3-216ENST00000545170 CBX8Q9HC52 389 aa9.66□□□□□ -0.86
ATXN3-216ENST00000545170 GUCY2FP51841 1108 aa9.66□□□□□ -0.86
ATXN3-216ENST00000545170 KLHL7Q8IXQ5 586 aa9.66□□□□□ -0.86
ATXN3-216ENST00000545170 MED4Q9NPJ6 270 aa9.66□□□□□ -0.86
ATXN3-216ENST00000545170 KRT71Q3SY84 523 aa9.66□□□□□ -0.86
ATXN3-216ENST00000545170 ARMC2Q8NEN0 867 aa9.66□□□□□ -0.86
ATXN3-216ENST00000545170 CFAP61Q8NHU2 1237 aa9.66□□□□□ -0.86
ATXN3-216ENST00000545170 CRCPO75575 148 aa9.65□□□□□ -0.86
ATXN3-216ENST00000545170 PPP4R3AQ6IN85 833 aa9.65□□□□□ -0.86
ATXN3-216ENST00000545170 IGSF22Q8N9C0 903 aa9.65□□□□□ -0.86
ATXN3-216ENST00000545170 LRRC27Q9C0I9 530 aa9.65□□□□□ -0.86
ATXN3-216ENST00000545170 ANKRD30BQ9BXX2 1392 aa9.65□□□□□ -0.86
ATXN3-216ENST00000545170 MYL6BP14649 208 aa9.65□□□□□ -0.86
ATXN3-216ENST00000545170 STX2P32856 288 aa9.65□□□□□ -0.86
ATXN3-216ENST00000545170 CA8P35219 290 aa9.65□□□□□ -0.86
ATXN3-216ENST00000545170 SKOR1P84550 965 aa9.65□□□□□ -0.86
ATXN3-216ENST00000545170 FAM212AQ96EL1 285 aa9.65□□□□□ -0.86
ATXN3-216ENST00000545170 BICC1Q9H694 974 aaKnown RBP9.65□□□□□ -0.86
ATXN3-216ENST00000545170 LRP2BPQ9P2M1 347 aa9.65□□□□□ -0.86
ATXN3-216ENST00000545170 HNRNPCP07910 306 aaKnown RBP eCLIP9.65□□□□□ -0.86
ATXN3-216ENST00000545170 TROVE2P10155 538 aaKnown RBP eCLIP9.65□□□□□ -0.86
ATXN3-216ENST00000545170 GUCY2CP25092 1073 aa9.65□□□□□ -0.86
ATXN3-216ENST00000545170 FBXO41Q8TF61 875 aa9.65□□□□□ -0.86
ATXN3-216ENST00000545170 ZNF215Q9UL58 517 aaPredicted RBP9.65□□□□□ -0.86
ATXN3-216ENST00000545170 EFCAB8A8MWE9 144 aa9.65□□□□□ -0.86
ATXN3-216ENST00000545170 GEN1Q17RS7 908 aa9.65□□□□□ -0.86
ATXN3-216ENST00000545170 STXBP4Q6ZWJ1 553 aa9.65□□□□□ -0.86
ATXN3-216ENST00000545170 TSHZ3Q63HK5 1081 aa9.65□□□□□ -0.87
ATXN3-216ENST00000545170 PDZD8Q8NEN9 1154 aa9.65□□□□□ -0.87
ATXN3-216ENST00000545170 CCT6BQ92526 530 aa9.65□□□□□ -0.87
ATXN3-216ENST00000545170 NAPBQ9H115 298 aa9.65□□□□□ -0.87
ATXN3-216ENST00000545170 NUCB1Q02818 461 aa9.64□□□□□ -0.87
ATXN3-216ENST00000545170 EVI5LQ96CN4 794 aa9.64□□□□□ -0.87
ATXN3-216ENST00000545170 MYO1CO00159 1063 aa9.64□□□□□ -0.87
ATXN3-216ENST00000545170 SH3BP5O60239 455 aa9.64□□□□□ -0.87
ATXN3-216ENST00000545170 CTNNA1P35221 906 aaKnown RBP9.64□□□□□ -0.87
ATXN3-216ENST00000545170 IRX1P78414 480 aaPredicted RBP9.64□□□□□ -0.87
ATXN3-216ENST00000545170 MYL5Q02045 173 aa9.64□□□□□ -0.87
ATXN3-216ENST00000545170 CTNND2Q9UQB3 1225 aa9.64□□□□□ -0.87
ATXN3-216ENST00000545170 DYTNA2CJ06 578 aa9.64□□□□□ -0.87
ATXN3-216ENST00000545170 PDE6BP35913 854 aa9.64□□□□□ -0.87
ATXN3-216ENST00000545170 GJC2Q5T442 439 aaPredicted RBP9.64□□□□□ -0.87
ATXN3-216ENST00000545170 RAPGEF4Q8WZA2 1011 aa9.64□□□□□ -0.87
ATXN3-216ENST00000545170 RGS16O15492 202 aaPredicted RBP9.64□□□□□ -0.87
ATXN3-216ENST00000545170 SPDL1Q96EA4 605 aa9.64□□□□□ -0.87
ATXN3-216ENST00000545170 ZNF711Q9Y462 761 aa9.64□□□□□ -0.87
ATXN3-216ENST00000545170 SPTLC2O15270 562 aa9.64□□□□□ -0.87
ATXN3-216ENST00000545170 GAS8O95995 478 aa9.64□□□□□ -0.87
ATXN3-216ENST00000545170 CATIPQ7Z7H3 387 aa9.64□□□□□ -0.87
ATXN3-216ENST00000545170 GPRASP1Q5JY77 1395 aa9.64□□□□□ -0.87
ATXN3-216ENST00000545170 MAP3K7O43318 606 aa9.64□□□□□ -0.87
ATXN3-216ENST00000545170 PPM1FP49593 454 aaPredicted RBP9.64□□□□□ -0.87
ATXN3-216ENST00000545170 AMOTQ4VCS5 1084 aa9.64□□□□□ -0.87
ATXN3-216ENST00000545170 SSH1Q8WYL5 1049 aa9.64□□□□□ -0.87
ATXN3-216ENST00000545170 STAC3Q96MF2 364 aa9.64□□□□□ -0.87
ATXN3-216ENST00000545170 FANCCQ00597 558 aa9.63□□□□□ -0.87
ATXN3-216ENST00000545170 TMEM67Q5HYA8 995 aa9.63□□□□□ -0.87
ATXN3-216ENST00000545170 PSMB7Q99436 277 aa9.63□□□□□ -0.87
ATXN3-216ENST00000545170 CCDC8Q9H0W5 538 aaPredicted RBP9.63□□□□□ -0.87
ATXN3-216ENST00000545170 CCDC14Q49A88 953 aa9.63□□□□□ -0.87
ATXN3-216ENST00000545170 EFCAB2Q5VUJ9 269 aa9.63□□□□□ -0.87
ATXN3-216ENST00000545170 NBPF10Q6P3W6 841 aaKnown RBP9.63□□□□□ -0.87
ATXN3-216ENST00000545170 ZBTB22O15209 634 aa9.63□□□□□ -0.87
ATXN3-216ENST00000545170 GFAPP14136 432 aa9.63□□□□□ -0.87
ATXN3-216ENST00000545170 C16orf87Q6PH81 154 aa9.63□□□□□ -0.87
ATXN3-216ENST00000545170 MICU3Q86XE3 530 aa9.63□□□□□ -0.87
ATXN3-216ENST00000545170 MAN1A2O60476 641 aa9.63□□□□□ -0.87
ATXN3-216ENST00000545170 RANBP6O60518 1105 aaKnown RBP9.63□□□□□ -0.87
ATXN3-216ENST00000545170 EEF1DP29692 281 aaKnown RBP9.63□□□□□ -0.87
ATXN3-216ENST00000545170 TRIM14Q14142 442 aa9.63□□□□□ -0.87
ATXN3-216ENST00000545170 HMG20BQ9P0W2 317 aa9.63□□□□□ -0.87
ATXN3-216ENST00000545170 CEP126Q9P2H0 1117 aa9.63□□□□□ -0.87
ATXN3-216ENST00000545170 SLC4A7Q9Y6M7 1214 aa9.63□□□□□ -0.87
ATXN3-216ENST00000545170 ITIH3Q06033 890 aa9.63□□□□□ -0.87
ATXN3-216ENST00000545170 RAD51AP2Q09MP3 1159 aa9.63□□□□□ -0.87
ATXN3-216ENST00000545170 ALDH1L2Q3SY69 923 aa9.63□□□□□ -0.87
ATXN3-216ENST00000545170 FAM133BQ5BKY9 247 aaKnown RBP9.63□□□□□ -0.87
ATXN3-216ENST00000545170 CCDC197Q8NCU1 140 aa9.63□□□□□ -0.87
ATXN3-216ENST00000545170 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.63□□□□□ -0.87
ATXN3-216ENST00000545170 ALG1Q9BT22 464 aa9.63□□□□□ -0.87
ATXN3-216ENST00000545170 TRPA1O75762 1119 aa9.62□□□□□ -0.87
ATXN3-216ENST00000545170 IFIT1P09914 478 aaKnown RBP9.62□□□□□ -0.87
ATXN3-216ENST00000545170 SNX16P57768 344 aa9.62□□□□□ -0.87
ATXN3-216ENST00000545170 NOX5Q96PH1 765 aa9.62□□□□□ -0.87
ATXN3-216ENST00000545170 DDX41Q9UJV9 622 aaKnown RBP9.62□□□□□ -0.87
ATXN3-216ENST00000545170 RAPGEF2Q9Y4G8 1499 aa9.62□□□□□ -0.87
ATXN3-216ENST00000545170 KRT15P19012 456 aa9.62□□□□□ -0.87
ATXN3-216ENST00000545170 SDSP20132 328 aa9.62□□□□□ -0.87
ATXN3-216ENST00000545170 LONP1P36776 959 aaKnown RBP9.62□□□□□ -0.87
ATXN3-216ENST00000545170 ESRRGP62508 458 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms