RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 ZMYM6O95789 1325 aa19.6■□□□□ 0.73
CHFR-224ENST00000545046 PDIA3P30101 505 aaKnown RBP19.6■□□□□ 0.73
CHFR-224ENST00000545046 HMGN5P82970 282 aaKnown RBP19.6■□□□□ 0.73
CHFR-224ENST00000545046 NFIXQ14938 502 aa19.6■□□□□ 0.73
CHFR-224ENST00000545046 CDC37L1Q7L3B6 337 aa19.6■□□□□ 0.73
CHFR-224ENST00000545046 SYAP1Q96A49 352 aaPredicted RBP19.6■□□□□ 0.73
CHFR-224ENST00000545046 ARMT1Q9H993 441 aa19.6■□□□□ 0.73
CHFR-224ENST00000545046 RBM27Q9P2N5 1060 aaKnown RBP19.6■□□□□ 0.73
CHFR-224ENST00000545046 NSFL1CQ9UNZ2 370 aaKnown RBP19.6■□□□□ 0.73
CHFR-224ENST00000545046 CHD4Q14839 1912 aa19.59■□□□□ 0.73
CHFR-224ENST00000545046 MYH13Q9UKX3 1938 aa19.59■□□□□ 0.73
CHFR-224ENST00000545046 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.59■□□□□ 0.73
CHFR-224ENST00000545046 EVCP57679 992 aa19.59■□□□□ 0.73
CHFR-224ENST00000545046 DNM1Q05193 864 aaKnown RBP19.59■□□□□ 0.73
CHFR-224ENST00000545046 IFNL3Q8IZI9 196 aa19.59■□□□□ 0.73
CHFR-224ENST00000545046 FAM84BQ96KN1 310 aaPredicted RBP19.59■□□□□ 0.73
CHFR-224ENST00000545046 NAPBQ9H115 298 aa19.59■□□□□ 0.73
CHFR-224ENST00000545046 ABCF2Q9UG63 623 aa19.59■□□□□ 0.73
CHFR-224ENST00000545046 CCT2P78371 535 aaKnown RBP19.59■□□□□ 0.73
CHFR-224ENST00000545046 SEMA3EO15041 775 aa19.58■□□□□ 0.72
CHFR-224ENST00000545046 GADD45BO75293 160 aaPredicted RBP19.58■□□□□ 0.72
CHFR-224ENST00000545046 TM4SF1P30408 202 aa19.58■□□□□ 0.72
CHFR-224ENST00000545046 CNBD1Q8NA66 436 aa19.58■□□□□ 0.72
CHFR-224ENST00000545046 DDX11Q96FC9 970 aa19.58■□□□□ 0.72
CHFR-224ENST00000545046 NACAP1Q9BZK3 213 aa19.58■□□□□ 0.72
CHFR-224ENST00000545046 RAI14Q9P0K7 980 aa19.58■□□□□ 0.72
CHFR-224ENST00000545046 BRPF3Q9ULD4 1205 aa19.58■□□□□ 0.72
CHFR-224ENST00000545046 PNPLA7Q6ZV29 1317 aa19.57■□□□□ 0.72
CHFR-224ENST00000545046 WTIPA6NIX2 430 aaPredicted RBP19.57■□□□□ 0.72
CHFR-224ENST00000545046 H3BQV1 296 aa19.57■□□□□ 0.72
CHFR-224ENST00000545046 FIBPO43427 364 aa19.57■□□□□ 0.72
CHFR-224ENST00000545046 CYP7A1P22680 504 aa19.57■□□□□ 0.72
CHFR-224ENST00000545046 IFFO2Q5TF58 517 aa19.57■□□□□ 0.72
CHFR-224ENST00000545046 FBXO33Q7Z6M2 555 aa19.57■□□□□ 0.72
CHFR-224ENST00000545046 NSUN7Q8NE18 718 aaKnown RBP19.57■□□□□ 0.72
CHFR-224ENST00000545046 NBPF3Q9H094 633 aa19.57■□□□□ 0.72
CHFR-224ENST00000545046 TMEM63CQ9P1W3 806 aa19.57■□□□□ 0.72
CHFR-224ENST00000545046 TRIM37O94972 964 aa19.57■□□□□ 0.72
CHFR-224ENST00000545046 HMGB2P26583 209 aaKnown RBP19.57■□□□□ 0.72
CHFR-224ENST00000545046 FERMT3Q86UX7 667 aa19.57■□□□□ 0.72
CHFR-224ENST00000545046 SLC4A4Q9Y6R1 1079 aa19.57■□□□□ 0.72
CHFR-224ENST00000545046 TNRC6CQ9HCJ0 1690 aaKnown RBP19.57■□□□□ 0.72
CHFR-224ENST00000545046 ANTXR2P58335 489 aa19.56■□□□□ 0.72
CHFR-224ENST00000545046 UBE2HP62256 183 aa19.56■□□□□ 0.72
CHFR-224ENST00000545046 TBC1D10CQ8IV04 446 aa19.56■□□□□ 0.72
CHFR-224ENST00000545046 PTPDC1A2A3K4 754 aa19.56■□□□□ 0.72
CHFR-224ENST00000545046 GSG1L2A8MUP6 293 aa19.56■□□□□ 0.72
CHFR-224ENST00000545046 KRT85P78386 507 aa19.56■□□□□ 0.72
CHFR-224ENST00000545046 LCORLQ8N3X6 602 aa19.56■□□□□ 0.72
CHFR-224ENST00000545046 NCOA5Q9HCD5 579 aaKnown RBP19.56■□□□□ 0.72
CHFR-224ENST00000545046 KLF18A0A0U1RQI7 1052 aa19.55■□□□□ 0.72
CHFR-224ENST00000545046 DHX16O60231 1041 aaKnown RBP19.55■□□□□ 0.72
CHFR-224ENST00000545046 CTDNEP1O95476 244 aa19.55■□□□□ 0.72
CHFR-224ENST00000545046 HIBADHP31937 336 aaKnown RBP19.55■□□□□ 0.72
CHFR-224ENST00000545046 EPB41L4AQ9HCS5 686 aaPredicted RBP19.55■□□□□ 0.72
CHFR-224ENST00000545046 GPHNQ9NQX3 736 aaPredicted RBP19.55■□□□□ 0.72
CHFR-224ENST00000545046 TDO2P48775 406 aa19.54■□□□□ 0.72
CHFR-224ENST00000545046 MIGA1Q8NAN2 632 aa19.54■□□□□ 0.72
CHFR-224ENST00000545046 MAGEB6P1A0A0J9YX57 407 aa19.54■□□□□ 0.72
CHFR-224ENST00000545046 GYS1P13807 737 aa19.54■□□□□ 0.72
CHFR-224ENST00000545046 GRAPQ13588 217 aa19.54■□□□□ 0.72
CHFR-224ENST00000545046 GRAPLQ8TC17 118 aaPredicted RBP19.54■□□□□ 0.72
CHFR-224ENST00000545046 ZSCAN16Q9H4T2 348 aaPredicted RBP19.54■□□□□ 0.72
CHFR-224ENST00000545046 PDS5AQ29RF7 1337 aaKnown RBP19.53■□□□□ 0.72
CHFR-224ENST00000545046 COL1A1P02452 1464 aaPredicted RBP19.53■□□□□ 0.72
CHFR-224ENST00000545046 PRKAB2O43741 272 aa19.53■□□□□ 0.72
CHFR-224ENST00000545046 CNNM2Q9H8M5 875 aa19.53■□□□□ 0.72
CHFR-224ENST00000545046 GOLGA8BA8MQT2 603 aa19.53■□□□□ 0.72
CHFR-224ENST00000545046 B4E1Z4 1266 aa19.53■□□□□ 0.72
CHFR-224ENST00000545046 ST5P78524 1137 aa19.53■□□□□ 0.72
CHFR-224ENST00000545046 PRR5LQ6MZQ0 368 aa19.53■□□□□ 0.72
CHFR-224ENST00000545046 CYB5R4Q7L1T6 521 aa19.53■□□□□ 0.72
CHFR-224ENST00000545046 TMEM87BQ96K49 555 aa19.53■□□□□ 0.72
CHFR-224ENST00000545046 ANGEL1Q9UNK9 670 aaKnown RBP19.53■□□□□ 0.72
CHFR-224ENST00000545046 CTDSPL2Q05D32 466 aa19.52■□□□□ 0.72
CHFR-224ENST00000545046 NAA16Q6N069 864 aaPredicted RBP19.52■□□□□ 0.72
CHFR-224ENST00000545046 LRSAM1Q6UWE0 723 aa19.52■□□□□ 0.72
CHFR-224ENST00000545046 PANK2Q9BZ23 570 aa19.52■□□□□ 0.72
CHFR-224ENST00000545046 KRT23Q9C075 422 aa19.52■□□□□ 0.72
CHFR-224ENST00000545046 TFCP2L1Q9NZI6 479 aa19.52■□□□□ 0.72
CHFR-224ENST00000545046 CACNA1SQ13698 1873 aa19.52■□□□□ 0.72
CHFR-224ENST00000545046 SALL1Q9NSC2 1324 aa19.52■□□□□ 0.71
CHFR-224ENST00000545046 SYCE3A1L190 88 aa19.51■□□□□ 0.71
CHFR-224ENST00000545046 SERPINB2P05120 415 aa19.51■□□□□ 0.71
CHFR-224ENST00000545046 KLRK1P26718 216 aa19.51■□□□□ 0.71
CHFR-224ENST00000545046 AKNAD1Q5T1N1 836 aa19.51■□□□□ 0.71
CHFR-224ENST00000545046 MFSD6Q6ZSS7 791 aa19.51■□□□□ 0.71
CHFR-224ENST00000545046 RPGRQ92834 1020 aaKnown RBP19.51■□□□□ 0.71
CHFR-224ENST00000545046 SCAND2PQ9GZW5 306 aaPredicted RBP19.51■□□□□ 0.71
CHFR-224ENST00000545046 ANKIB1Q9P2G1 1089 aa19.51■□□□□ 0.71
CHFR-224ENST00000545046 NEDD4P46934 1319 aa19.51■□□□□ 0.71
CHFR-224ENST00000545046 TIAM2Q8IVF5 1701 aa19.51■□□□□ 0.71
CHFR-224ENST00000545046 CCDC88AQ3V6T2 1871 aa19.51■□□□□ 0.71
CHFR-224ENST00000545046 SH2B2O14492 632 aaPredicted RBP19.5■□□□□ 0.71
CHFR-224ENST00000545046 RESTQ13127 1097 aa19.5■□□□□ 0.71
CHFR-224ENST00000545046 ADGRA1Q86SQ6 560 aa19.5■□□□□ 0.71
CHFR-224ENST00000545046 LEMD3Q9Y2U8 911 aa19.5■□□□□ 0.71
CHFR-224ENST00000545046 CPLX1O14810 134 aa19.5■□□□□ 0.71
CHFR-224ENST00000545046 TXNRD1Q16881 649 aa19.5■□□□□ 0.71
CHFR-224ENST00000545046 TPRNQ4KMQ1 711 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms