RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 DLL1O00548 723 aa5.53□□□□□ -1.52
SNHG1-220ENST00000544550 FBXO45P0C2W1 286 aa5.53□□□□□ -1.52
SNHG1-220ENST00000544550 GTF2E1P29083 439 aaPredicted RBP5.53□□□□□ -1.52
SNHG1-220ENST00000544550 FXR1P51114 621 aaKnown RBP eCLIP5.53□□□□□ -1.52
SNHG1-220ENST00000544550 KIF23Q02241 960 aaPredicted RBP5.53□□□□□ -1.52
SNHG1-220ENST00000544550 FBXO46Q6PJ61 603 aaPredicted RBP5.53□□□□□ -1.52
SNHG1-220ENST00000544550 DZIP3Q86Y13 1208 aaKnown RBP5.53□□□□□ -1.52
SNHG1-220ENST00000544550 AEBP1Q8IUX7 1158 aa5.53□□□□□ -1.52
SNHG1-220ENST00000544550 NKX2-3Q8TAU0 364 aa5.53□□□□□ -1.52
SNHG1-220ENST00000544550 GPKOWQ92917 476 aaPredicted RBP eCLIP5.53□□□□□ -1.522e-31■■■□□ 17.2
SNHG1-220ENST00000544550 GLIS2Q9BZE0 524 aaPredicted RBP5.53□□□□□ -1.52
SNHG1-220ENST00000544550 LGR6Q9HBX8 967 aa5.53□□□□□ -1.52
SNHG1-220ENST00000544550 ANKRD31Q8N7Z5 1873 aa5.53□□□□□ -1.52
SNHG1-220ENST00000544550 HEG1Q9ULI3 1381 aa5.53□□□□□ -1.52
SNHG1-220ENST00000544550 SNED1Q8TER0 1413 aa5.52□□□□□ -1.53
SNHG1-220ENST00000544550 FAM155AB1AL88 458 aaPredicted RBP5.52□□□□□ -1.53
SNHG1-220ENST00000544550 PPIP5K2O43314 1243 aa5.52□□□□□ -1.53
SNHG1-220ENST00000544550 TNNT2P45379 298 aaPredicted RBP5.52□□□□□ -1.53
SNHG1-220ENST00000544550 ZNF157P51786 506 aaPredicted RBP5.52□□□□□ -1.53
SNHG1-220ENST00000544550 EIF4G2P78344 907 aaKnown RBP eCLIP5.52□□□□□ -1.53
SNHG1-220ENST00000544550 TNIP1Q15025 636 aa5.52□□□□□ -1.53
SNHG1-220ENST00000544550 NOM1Q5C9Z4 860 aaKnown RBP5.52□□□□□ -1.53
SNHG1-220ENST00000544550 SPRYD7Q5W111 196 aa5.52□□□□□ -1.53
SNHG1-220ENST00000544550 INTS3Q68E01 1043 aaKnown RBP5.52□□□□□ -1.53
SNHG1-220ENST00000544550 PTCRAQ6ISU1 281 aaPredicted RBP5.52□□□□□ -1.53
SNHG1-220ENST00000544550 PDXDC2PQ6P474 469 aa5.52□□□□□ -1.53
SNHG1-220ENST00000544550 ZNF790Q6PG37 636 aa5.52□□□□□ -1.53
SNHG1-220ENST00000544550 OLFM4Q6UX06 510 aa5.52□□□□□ -1.53
SNHG1-220ENST00000544550 CRIPAKQ8N1N5 446 aa5.52□□□□□ -1.53
SNHG1-220ENST00000544550 SUPT20HQ8NEM7 779 aa5.52□□□□□ -1.53
SNHG1-220ENST00000544550 RPGRQ92834 1020 aaKnown RBP5.52□□□□□ -1.53
SNHG1-220ENST00000544550 FMNL2Q96PY5 1086 aa5.52□□□□□ -1.53
SNHG1-220ENST00000544550 ZIC5Q96T25 663 aa5.52□□□□□ -1.53
SNHG1-220ENST00000544550 BCL2L13Q9BXK5 485 aa5.52□□□□□ -1.53
SNHG1-220ENST00000544550 NYXQ9GZU5 481 aa5.52□□□□□ -1.53
SNHG1-220ENST00000544550 GBA2Q9HCG7 927 aaPredicted RBP5.52□□□□□ -1.53
SNHG1-220ENST00000544550 AAASQ9NRG9 546 aa5.52□□□□□ -1.53
SNHG1-220ENST00000544550 ZNRF3Q9ULT6 936 aa5.52□□□□□ -1.53
SNHG1-220ENST00000544550 GPSM3Q9Y4H4 160 aa5.52□□□□□ -1.53
SNHG1-220ENST00000544550 SLX4Q8IY92 1834 aa5.52□□□□□ -1.53
SNHG1-220ENST00000544550 NPC1L1Q9UHC9 1359 aa5.52□□□□□ -1.53
SNHG1-220ENST00000544550 H7C1D1 291 aa5.51□□□□□ -1.53
SNHG1-220ENST00000544550 S1PR4O95977 384 aa5.51□□□□□ -1.53
SNHG1-220ENST00000544550 GMPSP49915 693 aaPredicted RBP5.51□□□□□ -1.53
SNHG1-220ENST00000544550 TEFQ10587 303 aa5.51□□□□□ -1.53
SNHG1-220ENST00000544550 SEMA3FQ13275 785 aa5.51□□□□□ -1.53
SNHG1-220ENST00000544550 CRY2Q49AN0 593 aa5.51□□□□□ -1.53
SNHG1-220ENST00000544550 USP48Q86UV5 1035 aa5.51□□□□□ -1.53
SNHG1-220ENST00000544550 RBM17Q96I25 401 aaKnown RBP5.51□□□□□ -1.53
SNHG1-220ENST00000544550 ZNF496Q96IT1 587 aaPredicted RBP5.51□□□□□ -1.53
SNHG1-220ENST00000544550 CSRNP1Q96S65 589 aa5.51□□□□□ -1.53
SNHG1-220ENST00000544550 OCSTAMPQ9BR26 566 aa5.51□□□□□ -1.53
SNHG1-220ENST00000544550 UNC93B1Q9H1C4 597 aa5.51□□□□□ -1.53
SNHG1-220ENST00000544550 NIP7Q9Y221 180 aaKnown RBP eCLIP5.51□□□□□ -1.534e-44■■■■■ 26.8
SNHG1-220ENST00000544550 KIF7Q2M1P5 1343 aa5.5□□□□□ -1.53
SNHG1-220ENST00000544550 PPEF1O14829 653 aaPredicted RBP5.5□□□□□ -1.53
SNHG1-220ENST00000544550 A1BGP04217 495 aa5.5□□□□□ -1.53
SNHG1-220ENST00000544550 HOXA10P31260 410 aaPredicted RBP5.5□□□□□ -1.53
SNHG1-220ENST00000544550 PTK2Q05397 1052 aa5.5□□□□□ -1.53
SNHG1-220ENST00000544550 CXCL9Q07325 125 aa5.5□□□□□ -1.53
SNHG1-220ENST00000544550 AOC3Q16853 763 aa5.5□□□□□ -1.53
SNHG1-220ENST00000544550 KRT26Q7Z3Y9 468 aa5.5□□□□□ -1.53
SNHG1-220ENST00000544550 SLC17A8Q8NDX2 589 aa5.5□□□□□ -1.53
SNHG1-220ENST00000544550 ZNF296Q8WUU4 475 aaPredicted RBP5.5□□□□□ -1.53
SNHG1-220ENST00000544550 DCPSQ96C86 337 aaKnown RBP5.5□□□□□ -1.53
SNHG1-220ENST00000544550 UCN2Q96RP3 112 aa5.5□□□□□ -1.53
SNHG1-220ENST00000544550 PPP1R12CQ9BZL4 782 aa5.5□□□□□ -1.53
SNHG1-220ENST00000544550 SCN11AQ9UI33 1791 aa5.5□□□□□ -1.53
SNHG1-220ENST00000544550 TRPM7Q96QT4 1865 aa5.49□□□□□ -1.53
SNHG1-220ENST00000544550 TNRC18O15417 2968 aaPredicted RBP5.49□□□□□ -1.53
SNHG1-220ENST00000544550 IL13P35225 146 aa5.49□□□□□ -1.53
SNHG1-220ENST00000544550 HIRAP54198 1017 aaPredicted RBP5.49□□□□□ -1.53
SNHG1-220ENST00000544550 FKBP1BP68106 108 aa5.49□□□□□ -1.53
SNHG1-220ENST00000544550 NFX1Q12986 1120 aaKnown RBP5.49□□□□□ -1.53
SNHG1-220ENST00000544550 SH3BP5LQ7L8J4 393 aa5.49□□□□□ -1.53
SNHG1-220ENST00000544550 DPF2Q92785 391 aa5.49□□□□□ -1.53
SNHG1-220ENST00000544550 CRAMP1Q96RY5 1269 aa5.49□□□□□ -1.53
SNHG1-220ENST00000544550 CNOT7Q9UIV1 285 aaKnown RBP5.49□□□□□ -1.53
SNHG1-220ENST00000544550 FCF1Q9Y324 198 aaKnown RBP5.49□□□□□ -1.53
SNHG1-220ENST00000544550 COL4A5P29400 1685 aa5.49□□□□□ -1.53
SNHG1-220ENST00000544550 RIC1Q4ADV7 1423 aa5.48□□□□□ -1.53
SNHG1-220ENST00000544550 CASP8AP2Q9UKL3 1982 aa5.48□□□□□ -1.53
SNHG1-220ENST00000544550 IBTKQ9P2D0 1353 aaPredicted RBP5.48□□□□□ -1.53
SNHG1-220ENST00000544550 PALM3A6NDB9 673 aaPredicted RBP5.48□□□□□ -1.53
SNHG1-220ENST00000544550 FAM177BA6PVY3 158 aa5.48□□□□□ -1.53
SNHG1-220ENST00000544550 GPR25O00155 361 aa5.48□□□□□ -1.53
SNHG1-220ENST00000544550 FKTNO75072 461 aa5.48□□□□□ -1.53
SNHG1-220ENST00000544550 MCCD1P59942 119 aaPredicted RBP5.48□□□□□ -1.53
SNHG1-220ENST00000544550 KIAA2012Q0VF49 1180 aa5.48□□□□□ -1.53
SNHG1-220ENST00000544550 MTHFSDQ2M296 383 aaKnown RBP5.48□□□□□ -1.53
SNHG1-220ENST00000544550 ZNF697Q5TEC3 545 aa5.48□□□□□ -1.53
SNHG1-220ENST00000544550 SH3RF1Q7Z6J0 888 aa5.48□□□□□ -1.53
SNHG1-220ENST00000544550 MORC1Q86VD1 984 aa5.48□□□□□ -1.53
SNHG1-220ENST00000544550 RASAL3Q86YV0 1011 aa5.48□□□□□ -1.53
SNHG1-220ENST00000544550 ANKLE1Q8NAG6 615 aa5.48□□□□□ -1.53
SNHG1-220ENST00000544550 TRPM4Q8TD43 1214 aa5.48□□□□□ -1.53
SNHG1-220ENST00000544550 CFHR5Q9BXR6 569 aa5.48□□□□□ -1.53
SNHG1-220ENST00000544550 RTFDC1Q9BY42 306 aaPredicted RBP5.48□□□□□ -1.53
SNHG1-220ENST00000544550 ATP6V0A2Q9Y487 856 aa5.48□□□□□ -1.53
SNHG1-220ENST00000544550 UBR2Q8IWV8 1755 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms