RNA–Protein interactions for RNA: ENST00000544455.5

BRCA2-206, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA2, Length 10,984 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-206ENST00000544455 ZKSCAN5Q9Y2L8 839 aa4.41□□□□□ -1.7
BRCA2-206ENST00000544455 RANBP6O60518 1105 aaKnown RBP4.41□□□□□ -1.7
BRCA2-206ENST00000544455 CCDC192P0DO97 292 aa4.41□□□□□ -1.7
BRCA2-206ENST00000544455 TYRO3Q06418 890 aa4.41□□□□□ -1.7
BRCA2-206ENST00000544455 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.41□□□□□ -1.7
BRCA2-206ENST00000544455 PCDHA7Q9UN72 937 aa4.41□□□□□ -1.7
BRCA2-206ENST00000544455 GOLGA8AA7E2F4 631 aa4.41□□□□□ -1.7
BRCA2-206ENST00000544455 METAP2P50579 478 aaKnown RBP eCLIP4.41□□□□□ -1.7
BRCA2-206ENST00000544455 CCDC186Q7Z3E2 898 aa4.41□□□□□ -1.7
BRCA2-206ENST00000544455 CLIC6Q96NY7 704 aa4.41□□□□□ -1.7
BRCA2-206ENST00000544455 SLC26A6Q9BXS9 759 aa4.41□□□□□ -1.7
BRCA2-206ENST00000544455 TRIM5Q9C035 493 aa4.41□□□□□ -1.7
BRCA2-206ENST00000544455 CYP7A1P22680 504 aa4.41□□□□□ -1.7
BRCA2-206ENST00000544455 TXNRD3Q86VQ6 643 aa4.41□□□□□ -1.7
BRCA2-206ENST00000544455 CLSTN2Q9H4D0 955 aa4.41□□□□□ -1.7
BRCA2-206ENST00000544455 NDUFA8P51970 172 aa4.4□□□□□ -1.7
BRCA2-206ENST00000544455 RASGRP2Q7LDG7 609 aa4.4□□□□□ -1.7
BRCA2-206ENST00000544455 VSIG10Q8N0Z9 540 aa4.4□□□□□ -1.7
BRCA2-206ENST00000544455 C8orf76Q96K31 380 aa4.4□□□□□ -1.7
BRCA2-206ENST00000544455 FAM13BQ9NYF5 915 aa4.4□□□□□ -1.7
BRCA2-206ENST00000544455 NMT2O60551 498 aa4.4□□□□□ -1.7
BRCA2-206ENST00000544455 PDCP20941 246 aa4.4□□□□□ -1.7
BRCA2-206ENST00000544455 MCM5P33992 734 aa4.4□□□□□ -1.7
BRCA2-206ENST00000544455 TDO2P48775 406 aa4.4□□□□□ -1.7
BRCA2-206ENST00000544455 SNW1Q13573 536 aaKnown RBP4.4□□□□□ -1.7
BRCA2-206ENST00000544455 SCAND2PQ9GZW5 306 aaPredicted RBP4.4□□□□□ -1.7
BRCA2-206ENST00000544455 COL18A1P39060 1754 aa4.4□□□□□ -1.7
BRCA2-206ENST00000544455 TCRBV5S4A2TA0A5A2 114 aa4.4□□□□□ -1.7
BRCA2-206ENST00000544455 GNPATO15228 680 aa4.4□□□□□ -1.7
BRCA2-206ENST00000544455 FOXN1O15353 648 aa4.4□□□□□ -1.7
BRCA2-206ENST00000544455 SF3A1Q15459 793 aaKnown RBP4.4□□□□□ -1.7
BRCA2-206ENST00000544455 FSIP1Q8NA03 581 aa4.4□□□□□ -1.7
BRCA2-206ENST00000544455 ZSWIM5Q9P217 1185 aa4.4□□□□□ -1.7
BRCA2-206ENST00000544455 COL4A1P02462 1669 aa4.4□□□□□ -1.7
BRCA2-206ENST00000544455 CDHR2Q9BYE9 1310 aa4.4□□□□□ -1.7
BRCA2-206ENST00000544455 WDHD1O75717 1129 aaPredicted RBP4.4□□□□□ -1.7
BRCA2-206ENST00000544455 HMGB1P09429 215 aaKnown RBP4.4□□□□□ -1.7
BRCA2-206ENST00000544455 IL6STP40189 918 aaPredicted RBP4.4□□□□□ -1.7
BRCA2-206ENST00000544455 TRDNQ13061 729 aa4.4□□□□□ -1.7
BRCA2-206ENST00000544455 PUM3Q15397 648 aaKnown RBP4.4□□□□□ -1.7
BRCA2-206ENST00000544455 CSPP1Q1MSJ5 1256 aa4.4□□□□□ -1.7
BRCA2-206ENST00000544455 VPS37DQ86XT2 251 aa4.4□□□□□ -1.7
BRCA2-206ENST00000544455 NGLY1Q96IV0 654 aa4.4□□□□□ -1.7
BRCA2-206ENST00000544455 NAPBQ9H115 298 aa4.4□□□□□ -1.7
BRCA2-206ENST00000544455 ALDH8A1Q9H2A2 487 aaPredicted RBP4.4□□□□□ -1.7
BRCA2-206ENST00000544455 SLC5A1P13866 664 aa4.4□□□□□ -1.71
BRCA2-206ENST00000544455 GRIN1Q05586 938 aa4.4□□□□□ -1.71
BRCA2-206ENST00000544455 STK38Q15208 465 aa4.4□□□□□ -1.71
BRCA2-206ENST00000544455 TMEM67Q5HYA8 995 aa4.4□□□□□ -1.71
BRCA2-206ENST00000544455 IFNL3Q8IZI9 196 aa4.4□□□□□ -1.71
BRCA2-206ENST00000544455 ADAMTS7Q9UKP4 1686 aa4.4□□□□□ -1.71
BRCA2-206ENST00000544455 UQCRHLA0A096LP55 91 aa4.4□□□□□ -1.71
BRCA2-206ENST00000544455 IFIT3O14879 490 aaKnown RBP4.4□□□□□ -1.71
BRCA2-206ENST00000544455 UQCRHP07919 91 aa4.4□□□□□ -1.71
BRCA2-206ENST00000544455 IGHMBP2P38935 993 aaKnown RBP4.4□□□□□ -1.71
BRCA2-206ENST00000544455 CCDC144BQ3MJ40 725 aa4.4□□□□□ -1.71
BRCA2-206ENST00000544455 FAM47AQ5JRC9 791 aa4.4□□□□□ -1.71
BRCA2-206ENST00000544455 AOPEPQ8N6M6 819 aa4.4□□□□□ -1.71
BRCA2-206ENST00000544455 ALG1Q9BT22 464 aa4.4□□□□□ -1.71
BRCA2-206ENST00000544455 COBLO75128 1261 aa4.4□□□□□ -1.71
BRCA2-206ENST00000544455 FAM205CA6NFA0 338 aa4.4□□□□□ -1.71
BRCA2-206ENST00000544455 FGFR2P21802 821 aa4.4□□□□□ -1.71
BRCA2-206ENST00000544455 PRDX5P30044 214 aa4.4□□□□□ -1.71
BRCA2-206ENST00000544455 ZNF274Q96GC6 653 aaPredicted RBP4.4□□□□□ -1.71
BRCA2-206ENST00000544455 DISP2A7MBM2 1401 aa4.4□□□□□ -1.71
BRCA2-206ENST00000544455 LETM1O95202 739 aaPredicted RBP4.39□□□□□ -1.71
BRCA2-206ENST00000544455 ZNF165P49910 485 aa4.39□□□□□ -1.71
BRCA2-206ENST00000544455 OXER1Q8TDS5 423 aa4.39□□□□□ -1.71
BRCA2-206ENST00000544455 PLA2G12BQ9BX93 195 aa4.39□□□□□ -1.71
BRCA2-206ENST00000544455 CLIP2Q9UDT6 1046 aa4.39□□□□□ -1.71
BRCA2-206ENST00000544455 CCDC69A6NI79 296 aa4.39□□□□□ -1.71
BRCA2-206ENST00000544455 GSG1L2A8MUP6 293 aa4.39□□□□□ -1.71
BRCA2-206ENST00000544455 GOLGA8FQ08AF8 430 aa4.39□□□□□ -1.71
BRCA2-206ENST00000544455 GOLGA8DPQ0D2H9 430 aa4.39□□□□□ -1.71
BRCA2-206ENST00000544455 KIAA2012Q0VF49 1180 aa4.39□□□□□ -1.71
BRCA2-206ENST00000544455 PNOCQ13519 176 aa4.39□□□□□ -1.71
BRCA2-206ENST00000544455 APOA5Q6Q788 366 aa4.39□□□□□ -1.71
BRCA2-206ENST00000544455 AATFQ9NY61 560 aaKnown RBP eCLIP4.39□□□□□ -1.71
BRCA2-206ENST00000544455 NOM1Q5C9Z4 860 aaKnown RBP4.39□□□□□ -1.71
BRCA2-206ENST00000544455 KRT40Q6A162 431 aa4.39□□□□□ -1.71
BRCA2-206ENST00000544455 GRAMD1CQ8IYS0 662 aa4.39□□□□□ -1.71
BRCA2-206ENST00000544455 SALL1Q9NSC2 1324 aa4.39□□□□□ -1.71
BRCA2-206ENST00000544455 ARID4AP29374 1257 aaPredicted RBP4.39□□□□□ -1.71
BRCA2-206ENST00000544455 NR5A1Q13285 461 aa4.39□□□□□ -1.71
BRCA2-206ENST00000544455 CCDC152Q4G0S7 254 aa4.39□□□□□ -1.71
BRCA2-206ENST00000544455 FILIP1Q7Z7B0 1213 aa4.39□□□□□ -1.71
BRCA2-206ENST00000544455 STRBPQ96SI9 672 aaKnown RBP4.39□□□□□ -1.71
BRCA2-206ENST00000544455 SLC12A7Q9Y666 1083 aa4.39□□□□□ -1.71
BRCA2-206ENST00000544455 SYNE3Q6ZMZ3 975 aa4.39□□□□□ -1.71
BRCA2-206ENST00000544455 FAM200AQ8TCP9 573 aa4.39□□□□□ -1.71
BRCA2-206ENST00000544455 MROH7-TTC4A0A0A0MT08 1334 aa4.39□□□□□ -1.71
BRCA2-206ENST00000544455 BTBD18B2RXH4 712 aa4.39□□□□□ -1.71
BRCA2-206ENST00000544455 ADAMTS3O15072 1205 aa4.39□□□□□ -1.71
BRCA2-206ENST00000544455 OFD1O75665 1012 aa4.39□□□□□ -1.71
BRCA2-206ENST00000544455 CYP2D6P10635 497 aa4.39□□□□□ -1.71
BRCA2-206ENST00000544455 MAP3K12Q12852 859 aa4.39□□□□□ -1.71
BRCA2-206ENST00000544455 NOLC1Q14978 699 aaKnown RBP eCLIP4.39□□□□□ -1.71
BRCA2-206ENST00000544455 ZNF827Q17R98 1081 aa4.39□□□□□ -1.71
BRCA2-206ENST00000544455 PDILTQ8N807 584 aa4.39□□□□□ -1.71
BRCA2-206ENST00000544455 USP27XA6NNY8 438 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms