RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 CCL15Q16663 113 aa12.13□□□□□ -0.47
C2CD3-220ENST00000544293 CCDC184Q52MB2 194 aa12.13□□□□□ -0.47
C2CD3-220ENST00000544293 BEND3Q5T5X7 828 aa12.13□□□□□ -0.47
C2CD3-220ENST00000544293 UBE2Q1Q7Z7E8 422 aa12.13□□□□□ -0.47
C2CD3-220ENST00000544293 DZIP1LQ8IYY4 767 aaKnown RBP12.13□□□□□ -0.47
C2CD3-220ENST00000544293 SHISA4Q96DD7 197 aa12.13□□□□□ -0.47
C2CD3-220ENST00000544293 PRO3102Q9H379 93 aa12.13□□□□□ -0.47
C2CD3-220ENST00000544293 ZFYVE28Q9HCC9 887 aa12.13□□□□□ -0.47
C2CD3-220ENST00000544293 TCP10L2B9ZVM9 353 aa12.12□□□□□ -0.47
C2CD3-220ENST00000544293 MYO1BO43795 1136 aa12.12□□□□□ -0.47
C2CD3-220ENST00000544293 TLR2O60603 784 aa12.12□□□□□ -0.47
C2CD3-220ENST00000544293 VAMP4O75379 141 aa12.12□□□□□ -0.47
C2CD3-220ENST00000544293 IFIT5Q13325 482 aaKnown RBP12.12□□□□□ -0.47
C2CD3-220ENST00000544293 MTFR1Q15390 333 aa12.12□□□□□ -0.47
C2CD3-220ENST00000544293 TAF1CQ15572 869 aaPredicted RBP12.12□□□□□ -0.47
C2CD3-220ENST00000544293 SLC9C1Q4G0N8 1177 aa12.12□□□□□ -0.47
C2CD3-220ENST00000544293 LMBR1LQ6UX01 489 aa12.12□□□□□ -0.47
C2CD3-220ENST00000544293 WWC1Q8IX03 1113 aa12.12□□□□□ -0.47
C2CD3-220ENST00000544293 KAZALD1Q96I82 304 aa12.12□□□□□ -0.47
C2CD3-220ENST00000544293 CHMP4AQ9BY43 222 aa12.12□□□□□ -0.47
C2CD3-220ENST00000544293 PUS3Q9BZE2 481 aaKnown RBP12.12□□□□□ -0.47
C2CD3-220ENST00000544293 SERPINA10Q9UK55 444 aa12.12□□□□□ -0.47
C2CD3-220ENST00000544293 TTF2Q9UNY4 1162 aaKnown RBP12.12□□□□□ -0.47
C2CD3-220ENST00000544293 SNCAIPQ9Y6H5 919 aa12.12□□□□□ -0.47
C2CD3-220ENST00000544293 TRIOBPQ9H2D6 2365 aa12.11□□□□□ -0.47
C2CD3-220ENST00000544293 SPDYE5A6NIY4 337 aa12.11□□□□□ -0.47
C2CD3-220ENST00000544293 BTBD19C9JJ37 291 aa12.11□□□□□ -0.47
C2CD3-220ENST00000544293 F6X3S4 739 aa12.11□□□□□ -0.47
C2CD3-220ENST00000544293 GYG1P46976 350 aa12.11□□□□□ -0.47
C2CD3-220ENST00000544293 GTF2A2P52657 109 aa12.11□□□□□ -0.47
C2CD3-220ENST00000544293 RBM5P52756 815 aaKnown RBP eCLIP12.11□□□□□ -0.47
C2CD3-220ENST00000544293 LACTBP83111 547 aaPredicted RBP12.11□□□□□ -0.47
C2CD3-220ENST00000544293 MFSD14BQ5SR56 506 aa12.11□□□□□ -0.47
C2CD3-220ENST00000544293 C17orf99Q6UX52 265 aa12.11□□□□□ -0.47
C2CD3-220ENST00000544293 ZNF804AQ7Z570 1209 aa12.11□□□□□ -0.47
C2CD3-220ENST00000544293 STK31Q9BXU1 1019 aa12.11□□□□□ -0.47
C2CD3-220ENST00000544293 RBM27Q9P2N5 1060 aaKnown RBP12.11□□□□□ -0.47
C2CD3-220ENST00000544293 RANBP2P49792 3224 aaKnown RBP12.11□□□□□ -0.47
C2CD3-220ENST00000544293 IRF6O14896 467 aa12.1□□□□□ -0.47
C2CD3-220ENST00000544293 PLIN1O60240 522 aa12.1□□□□□ -0.47
C2CD3-220ENST00000544293 CRKP46108 304 aa12.1□□□□□ -0.47
C2CD3-220ENST00000544293 CACNB3P54284 484 aa12.1□□□□□ -0.47
C2CD3-220ENST00000544293 CCDC27Q2M243 656 aa12.1□□□□□ -0.47
C2CD3-220ENST00000544293 SLC4A8Q2Y0W8 1093 aa12.1□□□□□ -0.47
C2CD3-220ENST00000544293 CHRDL2Q6WN34 429 aa12.1□□□□□ -0.47
C2CD3-220ENST00000544293 FBXO33Q7Z6M2 555 aa12.1□□□□□ -0.47
C2CD3-220ENST00000544293 NBPF11Q86T75 865 aa12.1□□□□□ -0.47
C2CD3-220ENST00000544293 ZKSCAN4Q969J2 545 aaPredicted RBP12.1□□□□□ -0.47
C2CD3-220ENST00000544293 MYH16Q9H6N6 1097 aa12.1□□□□□ -0.47
C2CD3-220ENST00000544293 HIBADHP31937 336 aaKnown RBP12.09□□□□□ -0.47
C2CD3-220ENST00000544293 FKBP5Q13451 457 aaPredicted RBP12.09□□□□□ -0.47
C2CD3-220ENST00000544293 MOGSQ13724 837 aa12.09□□□□□ -0.47
C2CD3-220ENST00000544293 APOBEC3HQ6NTF7 200 aaKnown RBP12.09□□□□□ -0.47
C2CD3-220ENST00000544293 LDHAL6AQ6ZMR3 332 aa12.09□□□□□ -0.47
C2CD3-220ENST00000544293 RIPOR2Q9Y4F9 1068 aa12.09□□□□□ -0.47
C2CD3-220ENST00000544293 TNFAIP1Q13829 316 aa12.08□□□□□ -0.48
C2CD3-220ENST00000544293 UBE4AQ14139 1066 aa12.08□□□□□ -0.48
C2CD3-220ENST00000544293 TRIM47Q96LD4 638 aa12.08□□□□□ -0.48
C2CD3-220ENST00000544293 ADGRA2Q96PE1 1338 aa12.08□□□□□ -0.48
C2CD3-220ENST00000544293 CEP290O15078 2479 aa12.08□□□□□ -0.48
C2CD3-220ENST00000544293 ECM2O94769 699 aaPredicted RBP12.07□□□□□ -0.48
C2CD3-220ENST00000544293 ERO1BQ86YB8 467 aa12.07□□□□□ -0.48
C2CD3-220ENST00000544293 ZCCHC17Q9NP64 241 aaKnown RBP12.07□□□□□ -0.48
C2CD3-220ENST00000544293 CPA4Q9UI42 421 aa12.07□□□□□ -0.48
C2CD3-220ENST00000544293 CHMP3Q9Y3E7 222 aa12.07□□□□□ -0.48
C2CD3-220ENST00000544293 CETPP11597 493 aa12.06□□□□□ -0.48
C2CD3-220ENST00000544293 OSBPP22059 807 aa12.06□□□□□ -0.48
C2CD3-220ENST00000544293 HDLBPQ00341 1268 aaKnown RBP12.06□□□□□ -0.48
C2CD3-220ENST00000544293 ARHGEF6Q15052 776 aa12.06□□□□□ -0.48
C2CD3-220ENST00000544293 POTEHQ6S545 545 aa12.06□□□□□ -0.48
C2CD3-220ENST00000544293 MRIQ9BWK5 157 aa12.06□□□□□ -0.48
C2CD3-220ENST00000544293 CNNM1Q9NRU3 951 aa12.06□□□□□ -0.48
C2CD3-220ENST00000544293 SRRDQ9UH36 339 aa12.06□□□□□ -0.48
C2CD3-220ENST00000544293 IQSEC3Q9UPP2 1182 aaPredicted RBP12.06□□□□□ -0.48
C2CD3-220ENST00000544293 IL16Q14005 1332 aa12.06□□□□□ -0.48
C2CD3-220ENST00000544293 FANCIQ9NVI1 1328 aa12.06□□□□□ -0.48
C2CD3-220ENST00000544293 GRM8O00222 908 aa12.05□□□□□ -0.48
C2CD3-220ENST00000544293 GNRH1P01148 92 aa12.05□□□□□ -0.48
C2CD3-220ENST00000544293 INPP5BP32019 993 aa12.05□□□□□ -0.48
C2CD3-220ENST00000544293 GJA8P48165 433 aa12.05□□□□□ -0.48
C2CD3-220ENST00000544293 EXOSC9Q06265 439 aaKnown RBP12.05□□□□□ -0.48
C2CD3-220ENST00000544293 PPIL2Q13356 520 aa12.05□□□□□ -0.48
C2CD3-220ENST00000544293 CCDC57Q2TAC2 916 aa12.05□□□□□ -0.48
C2CD3-220ENST00000544293 LRRC24Q50LG9 513 aa12.05□□□□□ -0.48
C2CD3-220ENST00000544293 MIGA2Q7L4E1 593 aa12.05□□□□□ -0.48
C2CD3-220ENST00000544293 VGLL2Q8N8G2 317 aa12.05□□□□□ -0.48
C2CD3-220ENST00000544293 SUCLG2Q96I99 432 aa12.05□□□□□ -0.48
C2CD3-220ENST00000544293 ZDHHC15Q96MV8 337 aa12.05□□□□□ -0.48
C2CD3-220ENST00000544293 WRNIP1Q96S55 665 aa12.05□□□□□ -0.48
C2CD3-220ENST00000544293 ZNF112Q9UJU3 913 aa12.05□□□□□ -0.48
C2CD3-220ENST00000544293 CSADQ9Y600 493 aa12.05□□□□□ -0.48
C2CD3-220ENST00000544293 LAMB1P07942 1786 aa12.05□□□□□ -0.48
C2CD3-220ENST00000544293 RBBP6Q7Z6E9 1792 aaKnown RBP12.05□□□□□ -0.48
C2CD3-220ENST00000544293 SOX1O00570 391 aaPredicted RBP12.04□□□□□ -0.48
C2CD3-220ENST00000544293 NBPF7P0C2Y1 421 aaPredicted RBP12.04□□□□□ -0.48
C2CD3-220ENST00000544293 PSMC4P43686 418 aa12.04□□□□□ -0.48
C2CD3-220ENST00000544293 BCAMP50895 628 aa12.04□□□□□ -0.48
C2CD3-220ENST00000544293 PRMT2P55345 433 aa12.04□□□□□ -0.48
C2CD3-220ENST00000544293 SNAPC2Q13487 334 aa12.04□□□□□ -0.48
C2CD3-220ENST00000544293 GPAT2Q6NUI2 795 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms