RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 UBE3CQ15386 1083 aa16.24■□□□□ 0.19
HCFC2-202ENST00000544223 GRIK5Q16478 980 aa16.24■□□□□ 0.19
HCFC2-202ENST00000544223 GBP4Q96PP9 640 aa16.24■□□□□ 0.19
HCFC2-202ENST00000544223 IMMTQ16891 758 aaKnown RBP16.24■□□□□ 0.19
HCFC2-202ENST00000544223 LRRFIP1Q32MZ4 808 aaKnown RBP16.24■□□□□ 0.19
HCFC2-202ENST00000544223 ZNF213O14771 459 aa16.23■□□□□ 0.19
HCFC2-202ENST00000544223 BRD1O95696 1058 aa16.23■□□□□ 0.19
HCFC2-202ENST00000544223 MMP10P09238 476 aa16.23■□□□□ 0.19
HCFC2-202ENST00000544223 HIBADHP31937 336 aaKnown RBP16.23■□□□□ 0.19
HCFC2-202ENST00000544223 ZSCAN25Q6NSZ9 544 aa16.23■□□□□ 0.19
HCFC2-202ENST00000544223 SENP2Q9HC62 589 aa16.23■□□□□ 0.19
HCFC2-202ENST00000544223 MYH13Q9UKX3 1938 aa16.23■□□□□ 0.19
HCFC2-202ENST00000544223 CYP2D7A0A087X1C5 515 aa16.23■□□□□ 0.19
HCFC2-202ENST00000544223 PLSCR1O15162 318 aa16.23■□□□□ 0.19
HCFC2-202ENST00000544223 KDM4AO75164 1064 aa16.23■□□□□ 0.19
HCFC2-202ENST00000544223 PRPF40AO75400 957 aaKnown RBP16.23■□□□□ 0.19
HCFC2-202ENST00000544223 KRT32Q14532 448 aa16.23■□□□□ 0.19
HCFC2-202ENST00000544223 DHX32Q7L7V1 743 aaKnown RBP16.23■□□□□ 0.19
HCFC2-202ENST00000544223 FBXO33Q7Z6M2 555 aa16.23■□□□□ 0.19
HCFC2-202ENST00000544223 FERMT3Q86UX7 667 aa16.23■□□□□ 0.19
HCFC2-202ENST00000544223 ZNF219Q9P2Y4 722 aaPredicted RBP16.23■□□□□ 0.19
HCFC2-202ENST00000544223 EXOSC10Q01780 885 aaKnown RBP16.22■□□□□ 0.19
HCFC2-202ENST00000544223 FAM173BQ6P4H8 233 aa16.22■□□□□ 0.19
HCFC2-202ENST00000544223 PNPLA7Q6ZV29 1317 aa16.22■□□□□ 0.19
HCFC2-202ENST00000544223 DOCK2Q92608 1830 aa16.22■□□□□ 0.19
HCFC2-202ENST00000544223 SLC4A4Q9Y6R1 1079 aa16.22■□□□□ 0.19
HCFC2-202ENST00000544223 VPS37CA5D8V6 355 aaPredicted RBP16.22■□□□□ 0.19
HCFC2-202ENST00000544223 GSG1L2A8MUP6 293 aa16.22■□□□□ 0.19
HCFC2-202ENST00000544223 RXRAP19793 462 aa16.22■□□□□ 0.19
HCFC2-202ENST00000544223 ANTXR2P58335 489 aa16.22■□□□□ 0.19
HCFC2-202ENST00000544223 SCRN1Q12765 414 aa16.22■□□□□ 0.19
HCFC2-202ENST00000544223 DEFB132Q7Z7B7 95 aa16.22■□□□□ 0.19
HCFC2-202ENST00000544223 NEDD4P46934 1319 aa16.21■□□□□ 0.19
HCFC2-202ENST00000544223 B4E1Z4 1266 aa16.21■□□□□ 0.19
HCFC2-202ENST00000544223 NCLP19338 710 aaKnown RBP16.21■□□□□ 0.19
HCFC2-202ENST00000544223 IFNL3Q8IZI9 196 aa16.21■□□□□ 0.19
HCFC2-202ENST00000544223 GNL3LQ9NVN8 582 aaKnown RBP16.21■□□□□ 0.19
HCFC2-202ENST00000544223 RGL2O15211 777 aa16.21■□□□□ 0.19
HCFC2-202ENST00000544223 UFL1O94874 794 aa16.21■□□□□ 0.19
HCFC2-202ENST00000544223 CYB5R4Q7L1T6 521 aa16.21■□□□□ 0.19
HCFC2-202ENST00000544223 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.21■□□□□ 0.19
HCFC2-202ENST00000544223 MECOMQ03112 1051 aa16.2■□□□□ 0.18
HCFC2-202ENST00000544223 CRY2Q49AN0 593 aa16.2■□□□□ 0.18
HCFC2-202ENST00000544223 RRP12Q5JTH9 1297 aaKnown RBP16.2■□□□□ 0.18
HCFC2-202ENST00000544223 ZKSCAN3Q9BRR0 538 aa16.2■□□□□ 0.18
HCFC2-202ENST00000544223 RIMBP2O15034 1052 aa16.2■□□□□ 0.18
HCFC2-202ENST00000544223 PRC1O43663 620 aa16.2■□□□□ 0.18
HCFC2-202ENST00000544223 STX6O43752 255 aa16.2■□□□□ 0.18
HCFC2-202ENST00000544223 ANKRD2Q9GZV1 360 aa16.2■□□□□ 0.18
HCFC2-202ENST00000544223 AATFQ9NY61 560 aaKnown RBP eCLIP16.2■□□□□ 0.18
HCFC2-202ENST00000544223 POLLQ9UGP5 575 aa16.2■□□□□ 0.18
HCFC2-202ENST00000544223 BRPF3Q9ULD4 1205 aa16.2■□□□□ 0.18
HCFC2-202ENST00000544223 BAZ2AQ9UIF9 1905 aaKnown RBP16.19■□□□□ 0.18
HCFC2-202ENST00000544223 DDX11L8A8MPP1 907 aa16.19■□□□□ 0.18
HCFC2-202ENST00000544223 ZSCAN31Q96LW9 406 aaPredicted RBP16.19■□□□□ 0.18
HCFC2-202ENST00000544223 NAPBQ9H115 298 aa16.19■□□□□ 0.18
HCFC2-202ENST00000544223 SH2B1Q9NRF2 756 aaPredicted RBP16.19■□□□□ 0.18
HCFC2-202ENST00000544223 TOMM22Q9NS69 142 aa16.19■□□□□ 0.18
HCFC2-202ENST00000544223 IRS2Q9Y4H2 1338 aa16.19■□□□□ 0.18
HCFC2-202ENST00000544223 MINDY4BA8MYZ0 360 aa16.19■□□□□ 0.18
HCFC2-202ENST00000544223 TDO2P48775 406 aa16.19■□□□□ 0.18
HCFC2-202ENST00000544223 DIXDC1Q155Q3 683 aa16.19■□□□□ 0.18
HCFC2-202ENST00000544223 CDC37L1Q7L3B6 337 aa16.19■□□□□ 0.18
HCFC2-202ENST00000544223 CCDC144CPQ8IYA2 1237 aa16.19■□□□□ 0.18
HCFC2-202ENST00000544223 CTNNA3Q9UI47 895 aa16.19■□□□□ 0.18
HCFC2-202ENST00000544223 CACNA1SQ13698 1873 aa16.19■□□□□ 0.18
HCFC2-202ENST00000544223 PATL2C9JE40 543 aaKnown RBP16.18■□□□□ 0.18
HCFC2-202ENST00000544223 MB21D2Q8IYB1 491 aaPredicted RBP16.18■□□□□ 0.18
HCFC2-202ENST00000544223 GTF3C6Q969F1 213 aa16.18■□□□□ 0.18
HCFC2-202ENST00000544223 MYL10Q9BUA6 226 aa16.18■□□□□ 0.18
HCFC2-202ENST00000544223 LMBRD1Q9NUN5 540 aa16.18■□□□□ 0.18
HCFC2-202ENST00000544223 ANKRD31Q8N7Z5 1873 aa16.18■□□□□ 0.18
HCFC2-202ENST00000544223 ANKRD1Q15327 319 aa16.18■□□□□ 0.18
HCFC2-202ENST00000544223 NAA16Q6N069 864 aaPredicted RBP16.18■□□□□ 0.18
HCFC2-202ENST00000544223 NSUN4Q96CB9 384 aaKnown RBP16.18■□□□□ 0.18
HCFC2-202ENST00000544223 RBM17Q96I25 401 aaKnown RBP16.18■□□□□ 0.18
HCFC2-202ENST00000544223 RBM27Q9P2N5 1060 aaKnown RBP16.18■□□□□ 0.18
HCFC2-202ENST00000544223 CNPY2Q9Y2B0 182 aa16.18■□□□□ 0.18
HCFC2-202ENST00000544223 MAGEB6P1A0A0J9YX57 407 aa16.17■□□□□ 0.18
HCFC2-202ENST00000544223 C6orf229H3BNL8 230 aa16.17■□□□□ 0.18
HCFC2-202ENST00000544223 PRDM1O75626 825 aa16.17■□□□□ 0.18
HCFC2-202ENST00000544223 CTDNEP1O95476 244 aa16.17■□□□□ 0.18
HCFC2-202ENST00000544223 LARP1BQ659C4 914 aaKnown RBP16.17■□□□□ 0.18
HCFC2-202ENST00000544223 XDHP47989 1333 aa16.17■□□□□ 0.18
HCFC2-202ENST00000544223 GADD45BO75293 160 aaPredicted RBP16.17■□□□□ 0.18
HCFC2-202ENST00000544223 RALYLQ86SE5 291 aaKnown RBP16.17■□□□□ 0.18
HCFC2-202ENST00000544223 RIOK1Q9BRS2 568 aaKnown RBP16.17■□□□□ 0.18
HCFC2-202ENST00000544223 MTMR6Q9Y217 621 aa16.17■□□□□ 0.18
HCFC2-202ENST00000544223 DDX49Q9Y6V7 483 aaKnown RBP16.17■□□□□ 0.18
HCFC2-202ENST00000544223 TNS1Q9HBL0 1735 aaKnown RBP16.17■□□□□ 0.18
HCFC2-202ENST00000544223 ZSCAN22P10073 491 aaPredicted RBP16.16■□□□□ 0.18
HCFC2-202ENST00000544223 PDIA3P30101 505 aaKnown RBP16.16■□□□□ 0.18
HCFC2-202ENST00000544223 NCOA7Q8NI08 942 aa16.16■□□□□ 0.18
HCFC2-202ENST00000544223 GPT2Q8TD30 523 aa16.16■□□□□ 0.18
HCFC2-202ENST00000544223 GJB4Q9NTQ9 266 aa16.16■□□□□ 0.18
HCFC2-202ENST00000544223 GUCY1B3Q02153 619 aa16.16■□□□□ 0.18
HCFC2-202ENST00000544223 NLGN1Q8N2Q7 840 aa16.16■□□□□ 0.18
HCFC2-202ENST00000544223 ZNF622Q969S3 477 aaKnown RBP eCLIP16.16■□□□□ 0.18
HCFC2-202ENST00000544223 MXD3Q9BW11 206 aa16.16■□□□□ 0.18
HCFC2-202ENST00000544223 KLF18A0A0U1RQI7 1052 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms