RNA–Protein interactions for RNA: ENST00000544128.5

SP140-214, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 910 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-214ENST00000544128 E2F4Q16254 413 aa11.53□□□□□ -0.56
SP140-214ENST00000544128 BMP2KLQ5H9B9 411 aa11.53□□□□□ -0.56
SP140-214ENST00000544128 SPATA5Q8NB90 893 aa11.53□□□□□ -0.56
SP140-214ENST00000544128 TDRD7Q8NHU6 1098 aaKnown RBP11.53□□□□□ -0.56
SP140-214ENST00000544128 COA1Q9GZY4 146 aa11.53□□□□□ -0.56
SP140-214ENST00000544128 TAOK3Q9H2K8 898 aa11.53□□□□□ -0.56
SP140-214ENST00000544128 RRAGCQ9HB90 399 aa11.53□□□□□ -0.56
SP140-214ENST00000544128 DENND2AQ9ULE3 1009 aa11.53□□□□□ -0.56
SP140-214ENST00000544128 FER1L6Q2WGJ9 1857 aa11.53□□□□□ -0.56
SP140-214ENST00000544128 AKAP11Q9UKA4 1901 aa11.52□□□□□ -0.56
SP140-214ENST00000544128 TESPA1A2RU30 521 aaPredicted RBP11.52□□□□□ -0.57
SP140-214ENST00000544128 SEMA3EO15041 775 aa11.52□□□□□ -0.57
SP140-214ENST00000544128 IL1R1P14778 569 aa11.52□□□□□ -0.57
SP140-214ENST00000544128 RASSF7Q02833 373 aa11.52□□□□□ -0.57
SP140-214ENST00000544128 CNTROBQ8N137 903 aa11.52□□□□□ -0.57
SP140-214ENST00000544128 LARGE2Q8N3Y3 721 aa11.52□□□□□ -0.57
SP140-214ENST00000544128 ANTXR1Q9H6X2 564 aa11.52□□□□□ -0.57
SP140-214ENST00000544128 DBNDD1Q9H9R9 158 aa11.52□□□□□ -0.57
SP140-214ENST00000544128 PAG1Q9NWQ8 432 aa11.52□□□□□ -0.57
SP140-214ENST00000544128 ECE2O60344 883 aa11.51□□□□□ -0.57
SP140-214ENST00000544128 CYP2E1P05181 493 aaPredicted RBP11.51□□□□□ -0.57
SP140-214ENST00000544128 IARSP41252 1262 aaKnown RBP11.51□□□□□ -0.57
SP140-214ENST00000544128 TBC1D9Q6ZT07 1266 aa11.51□□□□□ -0.57
SP140-214ENST00000544128 SMC1BQ8NDV3 1235 aa11.51□□□□□ -0.57
SP140-214ENST00000544128 EVI5LQ96CN4 794 aa11.51□□□□□ -0.57
SP140-214ENST00000544128 VPS33BQ9H267 617 aa11.51□□□□□ -0.57
SP140-214ENST00000544128 JAG2Q9Y219 1238 aa11.51□□□□□ -0.57
SP140-214ENST00000544128 COL1A1P02452 1464 aaPredicted RBP11.51□□□□□ -0.57
SP140-214ENST00000544128 MYH13Q9UKX3 1938 aa11.5□□□□□ -0.57
SP140-214ENST00000544128 GTF2IP78347 998 aa11.5□□□□□ -0.57
SP140-214ENST00000544128 C9orf131Q5VYM1 1079 aa11.5□□□□□ -0.57
SP140-214ENST00000544128 PODNQ7Z5L7 613 aa11.5□□□□□ -0.57
SP140-214ENST00000544128 FBXW7Q969H0 707 aa11.5□□□□□ -0.57
SP140-214ENST00000544128 FSD1Q9BTV5 496 aa11.5□□□□□ -0.57
SP140-214ENST00000544128 MFRPQ9BY79 579 aa11.5□□□□□ -0.57
SP140-214ENST00000544128 PIH1D3Q9NQM4 214 aaKnown RBP11.5□□□□□ -0.57
SP140-214ENST00000544128 LTBP3Q9NS15 1303 aa11.5□□□□□ -0.57
SP140-214ENST00000544128 AK9Q5TCS8 1911 aa11.5□□□□□ -0.57
SP140-214ENST00000544128 TNRC18O15417 2968 aaPredicted RBP11.49□□□□□ -0.57
SP140-214ENST00000544128 FOXN1O15353 648 aa11.49□□□□□ -0.57
SP140-214ENST00000544128 TTF1Q15361 905 aaPredicted RBP11.49□□□□□ -0.57
SP140-214ENST00000544128 NIM1KQ8IY84 436 aa11.49□□□□□ -0.57
SP140-214ENST00000544128 KBTBD3Q8NAB2 608 aa11.49□□□□□ -0.57
SP140-214ENST00000544128 WDR66Q8TBY9 1149 aa11.49□□□□□ -0.57
SP140-214ENST00000544128 KCNQ5Q9NR82 932 aa11.49□□□□□ -0.57
SP140-214ENST00000544128 ABCF2Q9UG63 623 aa11.49□□□□□ -0.57
SP140-214ENST00000544128 PDS5AQ29RF7 1337 aaKnown RBP11.49□□□□□ -0.57
SP140-214ENST00000544128 YDJCA8MPS7 323 aa11.48□□□□□ -0.57
SP140-214ENST00000544128 CDC45O75419 566 aa11.48□□□□□ -0.57
SP140-214ENST00000544128 IDH1O75874 414 aaKnown RBP11.48□□□□□ -0.57
SP140-214ENST00000544128 TTLL5Q6EMB2 1281 aa11.48□□□□□ -0.57
SP140-214ENST00000544128 JDP2Q8WYK2 163 aa11.48□□□□□ -0.57
SP140-214ENST00000544128 LRP2BPQ9P2M1 347 aa11.48□□□□□ -0.57
SP140-214ENST00000544128 FAM205AQ6ZU69 1335 aa11.48□□□□□ -0.57
SP140-214ENST00000544128 CCDC88AQ3V6T2 1871 aa11.48□□□□□ -0.57
SP140-214ENST00000544128 SBF1O95248 1867 aa11.47□□□□□ -0.57
SP140-214ENST00000544128 MYO5AQ9Y4I1 1855 aaKnown RBP11.47□□□□□ -0.57
SP140-214ENST00000544128 COL4A5P29400 1685 aa11.47□□□□□ -0.57
SP140-214ENST00000544128 MLLT1Q03111 559 aaPredicted RBP11.47□□□□□ -0.57
SP140-214ENST00000544128 SMYD5Q6GMV2 418 aa11.47□□□□□ -0.57
SP140-214ENST00000544128 PRDM10Q9NQV6 1147 aa11.47□□□□□ -0.57
SP140-214ENST00000544128 RAI14Q9P0K7 980 aa11.47□□□□□ -0.57
SP140-214ENST00000544128 ZNRF3Q9ULT6 936 aa11.47□□□□□ -0.57
SP140-214ENST00000544128 USP17L3A6NCW0 530 aa11.46□□□□□ -0.57
SP140-214ENST00000544128 USP17L4A6NCW7 530 aa11.46□□□□□ -0.57
SP140-214ENST00000544128 RNF113AO15541 343 aaKnown RBP11.46□□□□□ -0.57
SP140-214ENST00000544128 RAD17O75943 681 aa11.46□□□□□ -0.57
SP140-214ENST00000544128 CHGBP05060 677 aa11.46□□□□□ -0.57
SP140-214ENST00000544128 LMNB1P20700 586 aa11.46□□□□□ -0.57
SP140-214ENST00000544128 CHMLP26374 656 aa11.46□□□□□ -0.57
SP140-214ENST00000544128 MAP3K12Q12852 859 aa11.46□□□□□ -0.57
SP140-214ENST00000544128 GRIK5Q16478 980 aa11.46□□□□□ -0.57
SP140-214ENST00000544128 MFSD14BQ5SR56 506 aa11.46□□□□□ -0.57
SP140-214ENST00000544128 SPTY2D1Q68D10 685 aaPredicted RBP11.46□□□□□ -0.57
SP140-214ENST00000544128 USP17L1Q7RTZ2 530 aa11.46□□□□□ -0.57
SP140-214ENST00000544128 ZGPATQ8N5A5 531 aaKnown RBP11.46□□□□□ -0.57
SP140-214ENST00000544128 TBC1D22AQ8WUA7 517 aa11.46□□□□□ -0.57
SP140-214ENST00000544128 MXD3Q9BW11 206 aa11.46□□□□□ -0.57
SP140-214ENST00000544128 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.46□□□□□ -0.57
SP140-214ENST00000544128 DIAPH3Q9NSV4 1193 aa11.46□□□□□ -0.57
SP140-214ENST00000544128 SCN9AQ15858 1988 aa11.45□□□□□ -0.58
SP140-214ENST00000544128 SALL1Q9NSC2 1324 aa11.45□□□□□ -0.58
SP140-214ENST00000544128 DOCK2Q92608 1830 aa11.45□□□□□ -0.58
SP140-214ENST00000544128 HIP1O00291 1037 aa11.45□□□□□ -0.58
SP140-214ENST00000544128 PITPNM1O00562 1244 aa11.45□□□□□ -0.58
SP140-214ENST00000544128 ZMYND10O75800 440 aa11.45□□□□□ -0.58
SP140-214ENST00000544128 LDHBP07195 334 aaKnown RBP11.45□□□□□ -0.58
SP140-214ENST00000544128 PDE6AP16499 860 aa11.45□□□□□ -0.58
SP140-214ENST00000544128 PRDX5P30044 214 aa11.45□□□□□ -0.58
SP140-214ENST00000544128 NMIQ13287 307 aaPredicted RBP11.45□□□□□ -0.58
SP140-214ENST00000544128 LRRFIP1Q32MZ4 808 aaKnown RBP11.45□□□□□ -0.58
SP140-214ENST00000544128 SLFNL1Q499Z3 407 aa11.45□□□□□ -0.58
SP140-214ENST00000544128 C8orf34Q49A92 452 aa11.45□□□□□ -0.58
SP140-214ENST00000544128 DACT2Q5SW24 774 aa11.45□□□□□ -0.58
SP140-214ENST00000544128 SLC9C2Q5TAH2 1124 aa11.45□□□□□ -0.58
SP140-214ENST00000544128 STRIP1Q5VSL9 837 aa11.45□□□□□ -0.58
SP140-214ENST00000544128 ZSCAN25Q6NSZ9 544 aa11.45□□□□□ -0.58
SP140-214ENST00000544128 CASC1Q6TDU7 716 aa11.45□□□□□ -0.58
SP140-214ENST00000544128 CWC27Q6UX04 472 aaKnown RBP11.45□□□□□ -0.58
SP140-214ENST00000544128 CERS5Q8N5B7 392 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms