RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 UFL1O94874 794 aa23.55■■□□□ 1.36
COPS7A-218ENST00000543939 BAG6P46379 1132 aa23.55■■□□□ 1.36
COPS7A-218ENST00000543939 HAND2P61296 217 aa23.55■■□□□ 1.36
COPS7A-218ENST00000543939 SP8Q8IXZ3 490 aa23.55■■□□□ 1.36
COPS7A-218ENST00000543939 TDRD7Q8NHU6 1098 aaKnown RBP23.55■■□□□ 1.36
COPS7A-218ENST00000543939 ZNF213O14771 459 aa23.54■■□□□ 1.36
COPS7A-218ENST00000543939 APPP05067 770 aa23.54■■□□□ 1.36
COPS7A-218ENST00000543939 GNAT2P19087 354 aa23.54■■□□□ 1.36
COPS7A-218ENST00000543939 SF3B2Q13435 895 aaKnown RBP23.54■■□□□ 1.36
COPS7A-218ENST00000543939 PKP1Q13835 747 aa23.54■■□□□ 1.36
COPS7A-218ENST00000543939 ZNF804AQ7Z570 1209 aa23.54■■□□□ 1.36
COPS7A-218ENST00000543939 ADGRA1Q86SQ6 560 aa23.54■■□□□ 1.36
COPS7A-218ENST00000543939 LCORLQ8N3X6 602 aa23.54■■□□□ 1.36
COPS7A-218ENST00000543939 MCM4P33991 863 aa23.53■■□□□ 1.36
COPS7A-218ENST00000543939 ST3GAL1Q11201 340 aa23.53■■□□□ 1.36
COPS7A-218ENST00000543939 CHAF1AQ13111 956 aaPredicted RBP23.53■■□□□ 1.36
COPS7A-218ENST00000543939 Q6ZUG5 572 aa23.53■■□□□ 1.36
COPS7A-218ENST00000543939 ZNF384Q8TF68 577 aa23.53■■□□□ 1.36
COPS7A-218ENST00000543939 EPB41L4AQ9HCS5 686 aaPredicted RBP23.53■■□□□ 1.36
COPS7A-218ENST00000543939 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.53■■□□□ 1.36
COPS7A-218ENST00000543939 IFNL3Q8IZI9 196 aa23.53■■□□□ 1.36
COPS7A-218ENST00000543939 GPR101Q96P66 508 aaPredicted RBP23.53■■□□□ 1.36
COPS7A-218ENST00000543939 ATP6V0A2Q9Y487 856 aa23.53■■□□□ 1.36
COPS7A-218ENST00000543939 KIAA1551Q9HCM1 1747 aa23.52■■□□□ 1.36
COPS7A-218ENST00000543939 CHD4Q14839 1912 aa23.52■■□□□ 1.36
COPS7A-218ENST00000543939 SALL1Q9NSC2 1324 aa23.52■■□□□ 1.36
COPS7A-218ENST00000543939 GSG1L2A8MUP6 293 aa23.52■■□□□ 1.36
COPS7A-218ENST00000543939 ALDH1B1P30837 517 aa23.52■■□□□ 1.36
COPS7A-218ENST00000543939 NAA16Q6N069 864 aaPredicted RBP23.52■■□□□ 1.36
COPS7A-218ENST00000543939 CLEC17AQ6ZS10 378 aa23.52■■□□□ 1.36
COPS7A-218ENST00000543939 CCDC83Q8IWF9 413 aa23.52■■□□□ 1.36
COPS7A-218ENST00000543939 MIGA1Q8NAN2 632 aa23.52■■□□□ 1.36
COPS7A-218ENST00000543939 TBC1D16Q8TBP0 767 aa23.52■■□□□ 1.36
COPS7A-218ENST00000543939 AGXT2Q9BYV1 514 aa23.52■■□□□ 1.36
COPS7A-218ENST00000543939 NBPF3Q9H094 633 aa23.52■■□□□ 1.36
COPS7A-218ENST00000543939 ZDHHC9Q9Y397 364 aa23.52■■□□□ 1.36
COPS7A-218ENST00000543939 TMED8Q6PL24 325 aaPredicted RBP23.51■■□□□ 1.35
COPS7A-218ENST00000543939 DEFB132Q7Z7B7 95 aa23.51■■□□□ 1.35
COPS7A-218ENST00000543939 NSUN4Q96CB9 384 aaKnown RBP23.51■■□□□ 1.35
COPS7A-218ENST00000543939 MASTLQ96GX5 879 aa23.51■■□□□ 1.35
COPS7A-218ENST00000543939 POLLQ9UGP5 575 aa23.51■■□□□ 1.35
COPS7A-218ENST00000543939 MAGEB6P1A0A0J9YX57 407 aa23.5■■□□□ 1.35
COPS7A-218ENST00000543939 PRKAB2O43741 272 aa23.5■■□□□ 1.35
COPS7A-218ENST00000543939 RIOK1Q9BRS2 568 aaKnown RBP23.5■■□□□ 1.35
COPS7A-218ENST00000543939 SLC4A4Q9Y6R1 1079 aa23.5■■□□□ 1.35
COPS7A-218ENST00000543939 IGSF3O75054 1194 aa23.5■■□□□ 1.35
COPS7A-218ENST00000543939 MECOMQ03112 1051 aa23.5■■□□□ 1.35
COPS7A-218ENST00000543939 MB21D2Q8IYB1 491 aaPredicted RBP23.5■■□□□ 1.35
COPS7A-218ENST00000543939 NECAB1Q8N987 351 aa23.5■■□□□ 1.35
COPS7A-218ENST00000543939 WDR66Q8TBY9 1149 aa23.5■■□□□ 1.35
COPS7A-218ENST00000543939 GBP4Q96PP9 640 aa23.5■■□□□ 1.35
COPS7A-218ENST00000543939 LRRC2Q9BYS8 371 aa23.5■■□□□ 1.35
COPS7A-218ENST00000543939 SPTY2D1Q68D10 685 aaPredicted RBP23.49■■□□□ 1.35
COPS7A-218ENST00000543939 FBXL16Q8N461 479 aa23.49■■□□□ 1.35
COPS7A-218ENST00000543939 NCOA7Q8NI08 942 aa23.49■■□□□ 1.35
COPS7A-218ENST00000543939 NAPBQ9H115 298 aa23.49■■□□□ 1.35
COPS7A-218ENST00000543939 CD209Q9NNX6 404 aa23.49■■□□□ 1.35
COPS7A-218ENST00000543939 TIAM2Q8IVF5 1701 aa23.49■■□□□ 1.35
COPS7A-218ENST00000543939 IL1R1P14778 569 aa23.48■■□□□ 1.35
COPS7A-218ENST00000543939 PRDX5P30044 214 aa23.48■■□□□ 1.35
COPS7A-218ENST00000543939 TBC1D10CQ8IV04 446 aa23.48■■□□□ 1.35
COPS7A-218ENST00000543939 BRF1Q92994 677 aa23.48■■□□□ 1.35
COPS7A-218ENST00000543939 NACAP1Q9BZK3 213 aa23.48■■□□□ 1.35
COPS7A-218ENST00000543939 SMC3Q9UQE7 1217 aa23.48■■□□□ 1.35
COPS7A-218ENST00000543939 DUOX1Q9NRD9 1551 aa23.48■■□□□ 1.35
COPS7A-218ENST00000543939 BRD1O95696 1058 aa23.47■■□□□ 1.35
COPS7A-218ENST00000543939 JAG2Q9Y219 1238 aa23.47■■□□□ 1.35
COPS7A-218ENST00000543939 FGD1P98174 961 aa23.47■■□□□ 1.35
COPS7A-218ENST00000543939 C2CD5Q86YS7 1000 aa23.47■■□□□ 1.35
COPS7A-218ENST00000543939 WDR19Q8NEZ3 1342 aa23.46■■□□□ 1.35
COPS7A-218ENST00000543939 C6orf229H3BNL8 230 aa23.46■■□□□ 1.35
COPS7A-218ENST00000543939 RALYLQ86SE5 291 aaKnown RBP23.46■■□□□ 1.35
COPS7A-218ENST00000543939 MCM5P33992 734 aa23.45■■□□□ 1.34
COPS7A-218ENST00000543939 DYNLL1P63167 89 aaKnown RBP23.45■■□□□ 1.34
COPS7A-218ENST00000543939 STYK1Q6J9G0 422 aa23.45■■□□□ 1.34
COPS7A-218ENST00000543939 CHST3Q7LGC8 479 aa23.45■■□□□ 1.34
COPS7A-218ENST00000543939 DDX11L8A8MPP1 907 aa23.45■■□□□ 1.34
COPS7A-218ENST00000543939 BAG4O95429 457 aaKnown RBP23.45■■□□□ 1.34
COPS7A-218ENST00000543939 TDO2P48775 406 aa23.45■■□□□ 1.34
COPS7A-218ENST00000543939 ANTXR2P58335 489 aa23.45■■□□□ 1.34
COPS7A-218ENST00000543939 GTF3C6Q969F1 213 aa23.45■■□□□ 1.34
COPS7A-218ENST00000543939 H0YIN7 160 aa23.44■■□□□ 1.34
COPS7A-218ENST00000543939 PRC1O43663 620 aa23.44■■□□□ 1.34
COPS7A-218ENST00000543939 GJB2P29033 226 aa23.44■■□□□ 1.34
COPS7A-218ENST00000543939 TRDNQ13061 729 aa23.44■■□□□ 1.34
COPS7A-218ENST00000543939 MPNDQ8N594 471 aa23.44■■□□□ 1.34
COPS7A-218ENST00000543939 ZNF622Q969S3 477 aaKnown RBP eCLIP23.44■■□□□ 1.34
COPS7A-218ENST00000543939 BAZ2AQ9UIF9 1905 aaKnown RBP23.43■■□□□ 1.34
COPS7A-218ENST00000543939 SLX4Q8IY92 1834 aa23.43■■□□□ 1.34
COPS7A-218ENST00000543939 LDHBP07195 334 aaKnown RBP23.43■■□□□ 1.34
COPS7A-218ENST00000543939 EVCP57679 992 aa23.43■■□□□ 1.34
COPS7A-218ENST00000543939 APOBRQ0VD83 1088 aa23.43■■□□□ 1.34
COPS7A-218ENST00000543939 STK3Q13188 491 aa23.43■■□□□ 1.34
COPS7A-218ENST00000543939 OLFM4Q6UX06 510 aa23.43■■□□□ 1.34
COPS7A-218ENST00000543939 DZIP1Q86YF9 867 aaKnown RBP23.43■■□□□ 1.34
COPS7A-218ENST00000543939 SDR42E1Q8WUS8 393 aa23.43■■□□□ 1.34
COPS7A-218ENST00000543939 PDGFDQ9GZP0 370 aaPredicted RBP23.43■■□□□ 1.34
COPS7A-218ENST00000543939 PFKFB2O60825 505 aa23.42■■□□□ 1.34
COPS7A-218ENST00000543939 CTDSPL2Q05D32 466 aa23.42■■□□□ 1.34
COPS7A-218ENST00000543939 ZNF274Q96GC6 653 aaPredicted RBP23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms