RNA–Protein interactions for RNA: ENST00000543772.2

PSMC1-202, Transcript of proteasome 26S subunit, ATPase 1, humanhuman

TSL 2 BASIC

Gene PSMC1, Length 1,389 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC1-202ENST00000543772 FKBP4Q02790 459 aaKnown RBP eCLIP10.43□□□□□ -0.74
PSMC1-202ENST00000543772 TPTE2Q6XPS3 522 aa10.43□□□□□ -0.74
PSMC1-202ENST00000543772 METTL3Q86U44 580 aaKnown RBP10.43□□□□□ -0.74
PSMC1-202ENST00000543772 RPAP2Q8IXW5 612 aaPredicted RBP10.43□□□□□ -0.74
PSMC1-202ENST00000543772 TTLL11Q8NHH1 800 aa10.43□□□□□ -0.74
PSMC1-202ENST00000543772 AIDAQ96BJ3 306 aa10.43□□□□□ -0.74
PSMC1-202ENST00000543772 CHMP4BQ9H444 224 aaKnown RBP10.43□□□□□ -0.74
PSMC1-202ENST00000543772 SH3TC1Q8TE82 1336 aa10.43□□□□□ -0.74
PSMC1-202ENST00000543772 KLRG2A4D1S0 409 aaPredicted RBP10.42□□□□□ -0.74
PSMC1-202ENST00000543772 RFX5P48382 616 aaPredicted RBP10.42□□□□□ -0.74
PSMC1-202ENST00000543772 CTCFP49711 727 aaPredicted RBP10.42□□□□□ -0.74
PSMC1-202ENST00000543772 SSH3Q8TE77 659 aa10.42□□□□□ -0.74
PSMC1-202ENST00000543772 PPP4R2Q9NY27 417 aa10.42□□□□□ -0.74
PSMC1-202ENST00000543772 HACL1Q9UJ83 578 aa10.42□□□□□ -0.74
PSMC1-202ENST00000543772 PDE8AO60658 829 aa10.41□□□□□ -0.74
PSMC1-202ENST00000543772 EPHX2P34913 555 aa10.41□□□□□ -0.74
PSMC1-202ENST00000543772 LBX1P52954 281 aa10.41□□□□□ -0.74
PSMC1-202ENST00000543772 HDAC1Q13547 482 aaPredicted RBP10.41□□□□□ -0.74
PSMC1-202ENST00000543772 SF3B3Q15393 1217 aaKnown RBP10.41□□□□□ -0.74
PSMC1-202ENST00000543772 MAP1SQ66K74 1059 aaPredicted RBP10.41□□□□□ -0.74
PSMC1-202ENST00000543772 LMBR1LQ6UX01 489 aa10.41□□□□□ -0.74
PSMC1-202ENST00000543772 NYXQ9GZU5 481 aa10.41□□□□□ -0.74
PSMC1-202ENST00000543772 ABCC12Q96J65 1359 aa10.41□□□□□ -0.74
PSMC1-202ENST00000543772 SLC10A3P09131 477 aa10.4□□□□□ -0.74
PSMC1-202ENST00000543772 ANKRD36CQ5JPF3 1778 aa10.4□□□□□ -0.75
PSMC1-202ENST00000543772 COL4A5P29400 1685 aa10.4□□□□□ -0.75
PSMC1-202ENST00000543772 SNED1Q8TER0 1413 aa10.4□□□□□ -0.75
PSMC1-202ENST00000543772 RASSF10A6NK89 507 aa10.39□□□□□ -0.75
PSMC1-202ENST00000543772 FZD9O00144 591 aa10.39□□□□□ -0.75
PSMC1-202ENST00000543772 HSPA8P11142 646 aaKnown RBP10.39□□□□□ -0.75
PSMC1-202ENST00000543772 IARSP41252 1262 aaKnown RBP10.39□□□□□ -0.75
PSMC1-202ENST00000543772 CTSWP56202 376 aa10.39□□□□□ -0.75
PSMC1-202ENST00000543772 PTPN12Q05209 780 aaKnown RBP10.39□□□□□ -0.75
PSMC1-202ENST00000543772 B4GALNT3Q6L9W6 998 aa10.39□□□□□ -0.75
PSMC1-202ENST00000543772 PPP1R18Q6NYC8 613 aa10.39□□□□□ -0.75
PSMC1-202ENST00000543772 RTKN2Q8IZC4 609 aa10.39□□□□□ -0.75
PSMC1-202ENST00000543772 CNTROBQ8N137 903 aa10.39□□□□□ -0.75
PSMC1-202ENST00000543772 NKX2-3Q8TAU0 364 aa10.39□□□□□ -0.75
PSMC1-202ENST00000543772 GREM2Q9H772 168 aa10.39□□□□□ -0.75
PSMC1-202ENST00000543772 DCTPP1Q9H773 170 aa10.39□□□□□ -0.75
PSMC1-202ENST00000543772 HDAC5Q9UQL6 1122 aa10.39□□□□□ -0.75
PSMC1-202ENST00000543772 SRGAP3O43295 1099 aa10.39□□□□□ -0.75
PSMC1-202ENST00000543772 ACTN4O43707 911 aaKnown RBP10.39□□□□□ -0.75
PSMC1-202ENST00000543772 COPS2P61201 443 aa10.39□□□□□ -0.75
PSMC1-202ENST00000543772 CRY2Q49AN0 593 aa10.39□□□□□ -0.75
PSMC1-202ENST00000543772 TRAF7Q6Q0C0 670 aa10.39□□□□□ -0.75
PSMC1-202ENST00000543772 KLHDC4Q8TBB5 520 aa10.39□□□□□ -0.75
PSMC1-202ENST00000543772 SEC31BQ9NQW1 1179 aa10.39□□□□□ -0.75
PSMC1-202ENST00000543772 NOP58Q9Y2X3 529 aaKnown RBP10.39□□□□□ -0.75
PSMC1-202ENST00000543772 PCDHB3Q9Y5E6 796 aa10.39□□□□□ -0.75
PSMC1-202ENST00000543772 LTBP1Q14766 1721 aa10.38□□□□□ -0.75
PSMC1-202ENST00000543772 WDR33Q9C0J8 1336 aaKnown RBP10.38□□□□□ -0.75
PSMC1-202ENST00000543772 GTF2E1P29083 439 aaPredicted RBP10.38□□□□□ -0.75
PSMC1-202ENST00000543772 DEFB115Q30KQ5 88 aa10.38□□□□□ -0.75
PSMC1-202ENST00000543772 SLC51AQ86UW1 340 aa10.38□□□□□ -0.75
PSMC1-202ENST00000543772 PNMA8AQ86V59 439 aaPredicted RBP10.38□□□□□ -0.75
PSMC1-202ENST00000543772 SMC5Q8IY18 1101 aa10.38□□□□□ -0.75
PSMC1-202ENST00000543772 GPC2Q8N158 579 aa10.38□□□□□ -0.75
PSMC1-202ENST00000543772 NLRP3Q96P20 1036 aa10.38□□□□□ -0.75
PSMC1-202ENST00000543772 CCDC85AQ96PX6 553 aaPredicted RBP10.38□□□□□ -0.75
PSMC1-202ENST00000543772 COPRSQ9NQ92 184 aa10.38□□□□□ -0.75
PSMC1-202ENST00000543772 ABT1Q9ULW3 272 aaKnown RBP10.38□□□□□ -0.75
PSMC1-202ENST00000543772 PA2G4Q9UQ80 394 aaKnown RBP10.38□□□□□ -0.75
PSMC1-202ENST00000543772 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.38□□□□□ -0.75
PSMC1-202ENST00000543772 RIC1Q4ADV7 1423 aa10.37□□□□□ -0.75
PSMC1-202ENST00000543772 RTL9Q8NET4 1388 aa10.37□□□□□ -0.75
PSMC1-202ENST00000543772 CFHP08603 1231 aa10.37□□□□□ -0.75
PSMC1-202ENST00000543772 ALDH1B1P30837 517 aa10.37□□□□□ -0.75
PSMC1-202ENST00000543772 HOXA10P31260 410 aaPredicted RBP10.37□□□□□ -0.75
PSMC1-202ENST00000543772 FMR1Q06787 632 aaKnown RBP eCLIP10.37□□□□□ -0.75
PSMC1-202ENST00000543772 BLOC1S3Q6QNY0 202 aa10.37□□□□□ -0.75
PSMC1-202ENST00000543772 ATG9AQ7Z3C6 839 aa10.37□□□□□ -0.75
PSMC1-202ENST00000543772 ABHD8Q96I13 439 aa10.37□□□□□ -0.75
PSMC1-202ENST00000543772 ZNF594Q96JF6 807 aaPredicted RBP10.37□□□□□ -0.75
PSMC1-202ENST00000543772 PSMD1Q99460 953 aa10.37□□□□□ -0.75
PSMC1-202ENST00000543772 PUS3Q9BZE2 481 aaKnown RBP10.37□□□□□ -0.75
PSMC1-202ENST00000543772 RWDD1Q9H446 243 aaPredicted RBP10.37□□□□□ -0.75
PSMC1-202ENST00000543772 GJA3Q9Y6H8 435 aa10.37□□□□□ -0.75
PSMC1-202ENST00000543772 THSD7BQ9C0I4 1608 aa10.36□□□□□ -0.75
PSMC1-202ENST00000543772 HSP90B1P14625 803 aaKnown RBP10.36□□□□□ -0.75
PSMC1-202ENST00000543772 ITGA6P23229 1130 aa10.36□□□□□ -0.75
PSMC1-202ENST00000543772 GPIHBP1Q8IV16 184 aa10.36□□□□□ -0.75
PSMC1-202ENST00000543772 JDP2Q8WYK2 163 aa10.36□□□□□ -0.75
PSMC1-202ENST00000543772 CCDC136Q96JN2 1154 aa10.36□□□□□ -0.75
PSMC1-202ENST00000543772 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.36□□□□□ -0.75
PSMC1-202ENST00000543772 RIPOR2Q9Y4F9 1068 aa10.36□□□□□ -0.75
PSMC1-202ENST00000543772 COL4A1P02462 1669 aa10.35□□□□□ -0.75
PSMC1-202ENST00000543772 DDX60Q8IY21 1712 aaKnown RBP10.35□□□□□ -0.75
PSMC1-202ENST00000543772 SASH1O94885 1247 aa10.35□□□□□ -0.75
PSMC1-202ENST00000543772 EIF6P56537 245 aaKnown RBP10.35□□□□□ -0.75
PSMC1-202ENST00000543772 MAP2K1Q02750 393 aaPredicted RBP10.35□□□□□ -0.75
PSMC1-202ENST00000543772 KMT5BQ4FZB7 885 aa10.35□□□□□ -0.75
PSMC1-202ENST00000543772 CCDC152Q4G0S7 254 aa10.35□□□□□ -0.75
PSMC1-202ENST00000543772 LRRC24Q50LG9 513 aa10.35□□□□□ -0.75
PSMC1-202ENST00000543772 CELF1Q92879 486 aaKnown RBP10.35□□□□□ -0.75
PSMC1-202ENST00000543772 TRAF5O00463 557 aa10.34□□□□□ -0.75
PSMC1-202ENST00000543772 LCE2BO14633 110 aa10.34□□□□□ -0.75
PSMC1-202ENST00000543772 GFRA3O60609 400 aa10.34□□□□□ -0.75
PSMC1-202ENST00000543772 HMMRO75330 724 aa10.34□□□□□ -0.75
PSMC1-202ENST00000543772 SURF6O75683 361 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms