RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 TRAK2O60296 914 aa6.42□□□□□ -1.38
NPIPB4-219ENST00000543660 IGSF3O75054 1194 aa6.42□□□□□ -1.38
NPIPB4-219ENST00000543660 ALDH1A1P00352 501 aa6.42□□□□□ -1.38
NPIPB4-219ENST00000543660 PRKAR2BP31323 418 aa6.42□□□□□ -1.38
NPIPB4-219ENST00000543660 CAP1Q01518 475 aa6.42□□□□□ -1.38
NPIPB4-219ENST00000543660 PTPN12Q05209 780 aaKnown RBP6.42□□□□□ -1.38
NPIPB4-219ENST00000543660 TAF7Q15545 349 aaPredicted RBP6.42□□□□□ -1.38
NPIPB4-219ENST00000543660 TMC4Q7Z404 712 aa6.42□□□□□ -1.38
NPIPB4-219ENST00000543660 LRP10Q7Z4F1 713 aa6.42□□□□□ -1.38
NPIPB4-219ENST00000543660 RTF1Q92541 710 aaKnown RBP6.42□□□□□ -1.38
NPIPB4-219ENST00000543660 ZNF333Q96JL9 665 aa6.42□□□□□ -1.38
NPIPB4-219ENST00000543660 GMLQ99445 158 aa6.42□□□□□ -1.38
NPIPB4-219ENST00000543660 MTRQ99707 1265 aa6.42□□□□□ -1.38
NPIPB4-219ENST00000543660 PRO3102Q9H379 93 aa6.42□□□□□ -1.38
NPIPB4-219ENST00000543660 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.42□□□□□ -1.38
NPIPB4-219ENST00000543660 NSFL1CQ9UNZ2 370 aaKnown RBP6.42□□□□□ -1.38
NPIPB4-219ENST00000543660 SCN9AQ15858 1988 aa6.42□□□□□ -1.38
NPIPB4-219ENST00000543660 LRRC37AA6NMS7 1700 aa6.42□□□□□ -1.38
NPIPB4-219ENST00000543660 ZNF609O15014 1411 aa6.42□□□□□ -1.38
NPIPB4-219ENST00000543660 TAF1P21675 1872 aa6.41□□□□□ -1.38
NPIPB4-219ENST00000543660 C6orf229H3BNL8 230 aa6.41□□□□□ -1.38
NPIPB4-219ENST00000543660 IGF2BP3O00425 579 aaKnown RBP eCLIP6.41□□□□□ -1.38
NPIPB4-219ENST00000543660 PER1O15534 1290 aaPredicted RBP6.41□□□□□ -1.38
NPIPB4-219ENST00000543660 GPSM2P81274 684 aa6.41□□□□□ -1.38
NPIPB4-219ENST00000543660 LDLRAD1Q5T700 205 aa6.41□□□□□ -1.38
NPIPB4-219ENST00000543660 SPRYD7Q5W111 196 aa6.41□□□□□ -1.38
NPIPB4-219ENST00000543660 RSBN1LQ6PCB5 846 aaPredicted RBP6.41□□□□□ -1.38
NPIPB4-219ENST00000543660 NLRP10Q86W26 655 aa6.41□□□□□ -1.38
NPIPB4-219ENST00000543660 AGBL3Q8NEM8 1001 aa6.41□□□□□ -1.38
NPIPB4-219ENST00000543660 TBC1D16Q8TBP0 767 aa6.41□□□□□ -1.38
NPIPB4-219ENST00000543660 CD99L2Q8TCZ2 262 aa6.41□□□□□ -1.38
NPIPB4-219ENST00000543660 CELF1Q92879 486 aaKnown RBP6.41□□□□□ -1.38
NPIPB4-219ENST00000543660 ERO1AQ96HE7 468 aa6.41□□□□□ -1.38
NPIPB4-219ENST00000543660 MYOZ2Q9NPC6 264 aa6.41□□□□□ -1.38
NPIPB4-219ENST00000543660 MTMR7Q9Y216 660 aa6.41□□□□□ -1.38
NPIPB4-219ENST00000543660 LAMB2P55268 1798 aa6.41□□□□□ -1.38
NPIPB4-219ENST00000543660 ANKRD36CQ5JPF3 1778 aa6.41□□□□□ -1.38
NPIPB4-219ENST00000543660 SPTBN5Q9NRC6 3674 aaKnown RBP6.4□□□□□ -1.38
NPIPB4-219ENST00000543660 LAMB4A4D0S4 1761 aa6.4□□□□□ -1.38
NPIPB4-219ENST00000543660 DPYSL4O14531 572 aa6.4□□□□□ -1.38
NPIPB4-219ENST00000543660 HTATSF1O43719 755 aaKnown RBP6.4□□□□□ -1.38
NPIPB4-219ENST00000543660 USP17L8P0C7I0 530 aa6.4□□□□□ -1.38
NPIPB4-219ENST00000543660 HSPA5P11021 654 aaKnown RBP6.4□□□□□ -1.38
NPIPB4-219ENST00000543660 INHBEP58166 350 aa6.4□□□□□ -1.38
NPIPB4-219ENST00000543660 EIF4A1P60842 406 aaKnown RBP6.4□□□□□ -1.38
NPIPB4-219ENST00000543660 TTLL12Q14166 644 aaPredicted RBP6.4□□□□□ -1.38
NPIPB4-219ENST00000543660 PDIA6Q15084 440 aa6.4□□□□□ -1.38
NPIPB4-219ENST00000543660 NBPF9Q3BBW0 867 aa6.4□□□□□ -1.38
NPIPB4-219ENST00000543660 EYA3Q99504 573 aa6.4□□□□□ -1.38
NPIPB4-219ENST00000543660 EFCC1Q9HA90 598 aa6.4□□□□□ -1.38
NPIPB4-219ENST00000543660 COL4A1P02462 1669 aa6.39□□□□□ -1.39
NPIPB4-219ENST00000543660 MANSC4A6NHS7 340 aaPredicted RBP6.39□□□□□ -1.39
NPIPB4-219ENST00000543660 TRIM66O15016 1216 aa6.39□□□□□ -1.39
NPIPB4-219ENST00000543660 GGCXP38435 758 aa6.39□□□□□ -1.39
NPIPB4-219ENST00000543660 EIF4G2P78344 907 aaKnown RBP eCLIP6.39□□□□□ -1.39
NPIPB4-219ENST00000543660 CRHR2Q13324 411 aa6.39□□□□□ -1.39
NPIPB4-219ENST00000543660 TCIRG1Q13488 830 aa6.39□□□□□ -1.39
NPIPB4-219ENST00000543660 SF3B3Q15393 1217 aaKnown RBP6.39□□□□□ -1.39
NPIPB4-219ENST00000543660 CC2D1BQ5T0F9 858 aaKnown RBP6.39□□□□□ -1.39
NPIPB4-219ENST00000543660 ARMC9Q7Z3E5 817 aa6.39□□□□□ -1.39
NPIPB4-219ENST00000543660 DDX12PQ92771 950 aa6.39□□□□□ -1.39
NPIPB4-219ENST00000543660 THUMPD2Q9BTF0 503 aaKnown RBP6.39□□□□□ -1.39
NPIPB4-219ENST00000543660 ZC3H12CQ9C0D7 883 aaKnown RBP6.39□□□□□ -1.39
NPIPB4-219ENST00000543660 TRMT112Q9UI30 125 aaKnown RBP6.39□□□□□ -1.39
NPIPB4-219ENST00000543660 ERBB4Q15303 1308 aa6.39□□□□□ -1.39
NPIPB4-219ENST00000543660 SH3TC1Q8TE82 1336 aa6.39□□□□□ -1.39
NPIPB4-219ENST00000543660 WTIPA6NIX2 430 aaPredicted RBP6.38□□□□□ -1.39
NPIPB4-219ENST00000543660 SOX1O00570 391 aaPredicted RBP6.38□□□□□ -1.39
NPIPB4-219ENST00000543660 WNT10BO00744 389 aa6.38□□□□□ -1.39
NPIPB4-219ENST00000543660 MAP3K7O43318 606 aa6.38□□□□□ -1.39
NPIPB4-219ENST00000543660 ZBTB48P10074 688 aaPredicted RBP6.38□□□□□ -1.39
NPIPB4-219ENST00000543660 NF2P35240 595 aa6.38□□□□□ -1.39
NPIPB4-219ENST00000543660 SP3Q02447 781 aa6.38□□□□□ -1.39
NPIPB4-219ENST00000543660 PRKG1Q13976 671 aa6.38□□□□□ -1.39
NPIPB4-219ENST00000543660 PROSER3Q2NL68 480 aa6.38□□□□□ -1.39
NPIPB4-219ENST00000543660 SLC4A8Q2Y0W8 1093 aa6.38□□□□□ -1.39
NPIPB4-219ENST00000543660 NBPF11Q86T75 865 aa6.38□□□□□ -1.39
NPIPB4-219ENST00000543660 PNISRQ8TF01 805 aaKnown RBP6.38□□□□□ -1.39
NPIPB4-219ENST00000543660 ZNF775Q96BV0 537 aaPredicted RBP6.38□□□□□ -1.39
NPIPB4-219ENST00000543660 FZD1Q9UP38 647 aa6.38□□□□□ -1.39
NPIPB4-219ENST00000543660 PTCH2Q9Y6C5 1203 aa6.38□□□□□ -1.39
NPIPB4-219ENST00000543660 DDX60Q8IY21 1712 aaKnown RBP6.38□□□□□ -1.39
NPIPB4-219ENST00000543660 TTC28Q96AY4 2481 aa6.37□□□□□ -1.39
NPIPB4-219ENST00000543660 KDM3BQ7LBC6 1761 aa6.37□□□□□ -1.39
NPIPB4-219ENST00000543660 ANXA1P04083 346 aa6.37□□□□□ -1.39
NPIPB4-219ENST00000543660 RPS8P62241 208 aaKnown RBP6.37□□□□□ -1.39
NPIPB4-219ENST00000543660 MAP3K11Q16584 847 aa6.37□□□□□ -1.39
NPIPB4-219ENST00000543660 SLC9C1Q4G0N8 1177 aa6.37□□□□□ -1.39
NPIPB4-219ENST00000543660 HSP90AB3PQ58FF7 597 aa6.37□□□□□ -1.39
NPIPB4-219ENST00000543660 DPF3Q92784 378 aa6.37□□□□□ -1.39
NPIPB4-219ENST00000543660 ZNF428Q96B54 188 aa6.37□□□□□ -1.39
NPIPB4-219ENST00000543660 SHISA4Q96DD7 197 aa6.37□□□□□ -1.39
NPIPB4-219ENST00000543660 SLC10A4Q96EP9 437 aa6.37□□□□□ -1.39
NPIPB4-219ENST00000543660 CDCA7LQ96GN5 454 aa6.37□□□□□ -1.39
NPIPB4-219ENST00000543660 CLMNQ96JQ2 1002 aa6.37□□□□□ -1.39
NPIPB4-219ENST00000543660 PTPN18Q99952 460 aa6.37□□□□□ -1.39
NPIPB4-219ENST00000543660 TMUB1Q9BVT8 246 aa6.37□□□□□ -1.39
NPIPB4-219ENST00000543660 COL25A1Q9BXS0 654 aaPredicted RBP6.37□□□□□ -1.39
NPIPB4-219ENST00000543660 ANGEL1Q9UNK9 670 aaKnown RBP6.37□□□□□ -1.39
NPIPB4-219ENST00000543660 A0A1W2PPC1 479 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms