RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 LRRC8AQ8IWT6 810 aa12.99□□□□□ -0.33
CDH4-201ENST00000543233 MIEF2Q96C03 454 aa12.99□□□□□ -0.33
CDH4-201ENST00000543233 MST1RQ04912 1400 aa12.99□□□□□ -0.33
CDH4-201ENST00000543233 HEG1Q9ULI3 1381 aa12.99□□□□□ -0.33
CDH4-201ENST00000543233 CCDC69A6NI79 296 aa12.99□□□□□ -0.33
CDH4-201ENST00000543233 HNRNPH1P31943 449 aaKnown RBP12.99□□□□□ -0.33
CDH4-201ENST00000543233 TYRO3Q06418 890 aa12.99□□□□□ -0.33
CDH4-201ENST00000543233 ZCRB1Q8TBF4 217 aaKnown RBP12.99□□□□□ -0.33
CDH4-201ENST00000543233 PSMD1Q99460 953 aa12.99□□□□□ -0.33
CDH4-201ENST00000543233 GNL3LQ9NVN8 582 aaKnown RBP12.99□□□□□ -0.33
CDH4-201ENST00000543233 DBNLQ9UJU6 430 aaKnown RBP12.99□□□□□ -0.33
CDH4-201ENST00000543233 LIMCH1Q9UPQ0 1083 aa12.99□□□□□ -0.33
CDH4-201ENST00000543233 NCAPD2Q15021 1401 aa12.98□□□□□ -0.33
CDH4-201ENST00000543233 ZNF142P52746 1687 aaPredicted RBP12.98□□□□□ -0.33
CDH4-201ENST00000543233 CACNA1FO60840 1977 aa12.98□□□□□ -0.33
CDH4-201ENST00000543233 A0A087WUV0 522 aaPredicted RBP12.98□□□□□ -0.33
CDH4-201ENST00000543233 NBPF26B4DH59 902 aa12.98□□□□□ -0.33
CDH4-201ENST00000543233 FOSBP53539 338 aa12.98□□□□□ -0.33
CDH4-201ENST00000543233 TIMM10P62072 90 aa12.98□□□□□ -0.33
CDH4-201ENST00000543233 NBPF14Q5TI25 921 aa12.98□□□□□ -0.33
CDH4-201ENST00000543233 NBPF15Q8N660 670 aa12.98□□□□□ -0.33
CDH4-201ENST00000543233 LRRC2Q9BYS8 371 aa12.98□□□□□ -0.33
CDH4-201ENST00000543233 CBX8Q9HC52 389 aa12.98□□□□□ -0.33
CDH4-201ENST00000543233 CYP46A1Q9Y6A2 500 aa12.98□□□□□ -0.33
CDH4-201ENST00000543233 TCHHQ07283 1943 aa12.98□□□□□ -0.33
CDH4-201ENST00000543233 SPATA31A3Q5VYP0 1347 aa12.98□□□□□ -0.33
CDH4-201ENST00000543233 H3BQF6 201 aa12.98□□□□□ -0.33
CDH4-201ENST00000543233 ELF1P32519 619 aa12.98□□□□□ -0.33
CDH4-201ENST00000543233 EVCP57679 992 aa12.98□□□□□ -0.33
CDH4-201ENST00000543233 CREB3L3Q68CJ9 461 aa12.98□□□□□ -0.33
CDH4-201ENST00000543233 TBC1D22AQ8WUA7 517 aa12.98□□□□□ -0.33
CDH4-201ENST00000543233 BORCS6Q96GS4 357 aa12.98□□□□□ -0.33
CDH4-201ENST00000543233 FUCA2Q9BTY2 467 aa12.98□□□□□ -0.33
CDH4-201ENST00000543233 NUCKS1Q9H1E3 243 aaKnown RBP12.98□□□□□ -0.33
CDH4-201ENST00000543233 VEZTQ9HBM0 779 aa12.98□□□□□ -0.33
CDH4-201ENST00000543233 MED1Q15648 1581 aaPredicted RBP12.98□□□□□ -0.33
CDH4-201ENST00000543233 ATP2B2Q01814 1243 aa12.97□□□□□ -0.33
CDH4-201ENST00000543233 PTPN12Q05209 780 aaKnown RBP12.97□□□□□ -0.33
CDH4-201ENST00000543233 MAP3K11Q16584 847 aa12.97□□□□□ -0.33
CDH4-201ENST00000543233 FAM173BQ6P4H8 233 aa12.97□□□□□ -0.33
CDH4-201ENST00000543233 CARD6Q9BX69 1037 aa12.97□□□□□ -0.33
CDH4-201ENST00000543233 PSD3Q9NYI0 1048 aa12.97□□□□□ -0.33
CDH4-201ENST00000543233 GOLGA6L19H0YKK7 550 aa12.97□□□□□ -0.33
CDH4-201ENST00000543233 SYT1P21579 422 aa12.97□□□□□ -0.33
CDH4-201ENST00000543233 GJB2P29033 226 aa12.97□□□□□ -0.33
CDH4-201ENST00000543233 CC2D1AQ6P1N0 951 aaPredicted RBP12.97□□□□□ -0.33
CDH4-201ENST00000543233 OTUD6BQ8N6M0 293 aa12.97□□□□□ -0.33
CDH4-201ENST00000543233 ITFG2Q969R8 447 aa12.97□□□□□ -0.33
CDH4-201ENST00000543233 DNAI1Q9UI46 699 aa12.97□□□□□ -0.33
CDH4-201ENST00000543233 FMNL3Q8IVF7 1028 aa12.97□□□□□ -0.33
CDH4-201ENST00000543233 KAT2BQ92831 832 aa12.97□□□□□ -0.33
CDH4-201ENST00000543233 MKRN1Q9UHC7 482 aaKnown RBP12.97□□□□□ -0.33
CDH4-201ENST00000543233 SLIT3O75094 1523 aa12.97□□□□□ -0.33
CDH4-201ENST00000543233 ELP1O95163 1332 aa12.96□□□□□ -0.33
CDH4-201ENST00000543233 JAKMIP3Q5VZ66 844 aa12.96□□□□□ -0.33
CDH4-201ENST00000543233 ARMC3Q5W041 872 aa12.96□□□□□ -0.33
CDH4-201ENST00000543233 FAM177A1Q8N128 213 aaPredicted RBP12.96□□□□□ -0.33
CDH4-201ENST00000543233 CTCFLQ8NI51 663 aaPredicted RBP12.96□□□□□ -0.33
CDH4-201ENST00000543233 TTC14Q96N46 770 aa12.96□□□□□ -0.33
CDH4-201ENST00000543233 NEDD9Q14511 834 aa12.96□□□□□ -0.34
CDH4-201ENST00000543233 TNNI3KQ59H18 835 aa12.96□□□□□ -0.34
CDH4-201ENST00000543233 CCDC102AQ96A19 550 aa12.96□□□□□ -0.34
CDH4-201ENST00000543233 INTS4Q96HW7 963 aaKnown RBP12.96□□□□□ -0.34
CDH4-201ENST00000543233 FAXDC2Q96IV6 333 aa12.96□□□□□ -0.34
CDH4-201ENST00000543233 TRIM6Q9C030 488 aaPredicted RBP12.96□□□□□ -0.34
CDH4-201ENST00000543233 NUP62CLQ9H1M0 184 aa12.96□□□□□ -0.34
CDH4-201ENST00000543233 SNRKQ9NRH2 765 aa12.96□□□□□ -0.34
CDH4-201ENST00000543233 FPGT-TNNI3KV9GXZ4 949 aa12.96□□□□□ -0.34
CDH4-201ENST00000543233 STX6O43752 255 aa12.95□□□□□ -0.34
CDH4-201ENST00000543233 IRX1P78414 480 aaPredicted RBP12.95□□□□□ -0.34
CDH4-201ENST00000543233 ME3Q16798 604 aa12.95□□□□□ -0.34
CDH4-201ENST00000543233 PAIP2Q9BPZ3 127 aaKnown RBP12.95□□□□□ -0.34
CDH4-201ENST00000543233 PDE11AQ9HCR9 933 aa12.95□□□□□ -0.34
CDH4-201ENST00000543233 KDM3BQ7LBC6 1761 aa12.95□□□□□ -0.34
CDH4-201ENST00000543233 PEX19P40855 299 aa12.95□□□□□ -0.34
CDH4-201ENST00000543233 PSMD2Q13200 908 aa12.95□□□□□ -0.34
CDH4-201ENST00000543233 THOC1Q96FV9 657 aaKnown RBP12.95□□□□□ -0.34
CDH4-201ENST00000543233 SLC27A2O14975 620 aa12.95□□□□□ -0.34
CDH4-201ENST00000543233 IPO7O95373 1038 aaKnown RBP12.95□□□□□ -0.34
CDH4-201ENST00000543233 LRRC24Q50LG9 513 aa12.95□□□□□ -0.34
CDH4-201ENST00000543233 TNMDQ9H2S6 317 aa12.95□□□□□ -0.34
CDH4-201ENST00000543233 SLAIN2Q9P270 581 aa12.95□□□□□ -0.34
CDH4-201ENST00000543233 FAN1Q9Y2M0 1017 aa12.95□□□□□ -0.34
CDH4-201ENST00000543233 GPTP24298 496 aa12.94□□□□□ -0.34
CDH4-201ENST00000543233 ZNF165P49910 485 aa12.94□□□□□ -0.34
CDH4-201ENST00000543233 EIF5P55010 431 aaKnown RBP12.94□□□□□ -0.34
CDH4-201ENST00000543233 C11orf91Q3C1V1 193 aa12.94□□□□□ -0.34
CDH4-201ENST00000543233 LRP10Q7Z4F1 713 aa12.94□□□□□ -0.34
CDH4-201ENST00000543233 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.94□□□□□ -0.34
CDH4-201ENST00000543233 DNAJC25Q9H1X3 360 aa12.94□□□□□ -0.34
CDH4-201ENST00000543233 TPCN1Q9ULQ1 816 aa12.94□□□□□ -0.34
CDH4-201ENST00000543233 ATP8B1O43520 1251 aa12.94□□□□□ -0.34
CDH4-201ENST00000543233 CPP00450 1065 aa12.94□□□□□ -0.34
CDH4-201ENST00000543233 DNM1Q05193 864 aaKnown RBP12.94□□□□□ -0.34
CDH4-201ENST00000543233 HSP90B2PQ58FF3 399 aa12.94□□□□□ -0.34
CDH4-201ENST00000543233 BLOC1S2Q6QNY1 142 aa12.94□□□□□ -0.34
CDH4-201ENST00000543233 PUS3Q9BZE2 481 aaKnown RBP12.94□□□□□ -0.34
CDH4-201ENST00000543233 NBPF3Q9H094 633 aa12.94□□□□□ -0.34
CDH4-201ENST00000543233 TNS3Q68CZ2 1445 aa12.94□□□□□ -0.34
CDH4-201ENST00000543233 STRCQ7RTU9 1775 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms