RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 PODXL2Q9NZ53 605 aa17.75■□□□□ 0.43
CNOT9-208ENST00000542068 POLR3GO15318 223 aaPredicted RBP17.75■□□□□ 0.43
CNOT9-208ENST00000542068 URI1O94763 535 aaPredicted RBP17.75■□□□□ 0.43
CNOT9-208ENST00000542068 IMMTQ16891 758 aaKnown RBP17.75■□□□□ 0.43
CNOT9-208ENST00000542068 PDILTQ8N807 584 aa17.75■□□□□ 0.43
CNOT9-208ENST00000542068 ERO1AQ96HE7 468 aa17.75■□□□□ 0.43
CNOT9-208ENST00000542068 PRC1O43663 620 aa17.74■□□□□ 0.43
CNOT9-208ENST00000542068 ADAMTS2O95450 1211 aa17.74■□□□□ 0.43
CNOT9-208ENST00000542068 EXOSC10Q01780 885 aaKnown RBP17.74■□□□□ 0.43
CNOT9-208ENST00000542068 TRDNQ13061 729 aa17.74■□□□□ 0.43
CNOT9-208ENST00000542068 CFAP100Q494V2 611 aa17.74■□□□□ 0.43
CNOT9-208ENST00000542068 ARHGAP29Q52LW3 1261 aa17.74■□□□□ 0.43
CNOT9-208ENST00000542068 SLC9C2Q5TAH2 1124 aa17.74■□□□□ 0.43
CNOT9-208ENST00000542068 KIF28PB7ZC32 967 aa17.74■□□□□ 0.43
CNOT9-208ENST00000542068 STARD3NLO95772 234 aa17.74■□□□□ 0.43
CNOT9-208ENST00000542068 LINC00301Q8NCQ3 95 aa17.74■□□□□ 0.43
CNOT9-208ENST00000542068 GREM2Q9H772 168 aa17.74■□□□□ 0.43
CNOT9-208ENST00000542068 WDR17Q8IZU2 1322 aa17.74■□□□□ 0.43
CNOT9-208ENST00000542068 PUS7LQ9H0K6 701 aaKnown RBP17.74■□□□□ 0.43
CNOT9-208ENST00000542068 SLFN14P0C7P3 912 aa17.73■□□□□ 0.43
CNOT9-208ENST00000542068 ITGA6P23229 1130 aa17.73■□□□□ 0.43
CNOT9-208ENST00000542068 MICU3Q86XE3 530 aa17.73■□□□□ 0.43
CNOT9-208ENST00000542068 DPF2Q92785 391 aa17.73■□□□□ 0.43
CNOT9-208ENST00000542068 ZNF335Q9H4Z2 1342 aaPredicted RBP17.73■□□□□ 0.43
CNOT9-208ENST00000542068 ZNF213O14771 459 aa17.73■□□□□ 0.43
CNOT9-208ENST00000542068 GSDMDP57764 484 aa17.73■□□□□ 0.43
CNOT9-208ENST00000542068 TCIRG1Q13488 830 aa17.73■□□□□ 0.43
CNOT9-208ENST00000542068 ADALQ6DHV7 355 aa17.73■□□□□ 0.43
CNOT9-208ENST00000542068 CLIC6Q96NY7 704 aa17.73■□□□□ 0.43
CNOT9-208ENST00000542068 UTP14AQ9BVJ6 771 aaKnown RBP17.73■□□□□ 0.43
CNOT9-208ENST00000542068 INCENPQ9NQS7 918 aa17.73■□□□□ 0.43
CNOT9-208ENST00000542068 FGAP02671 866 aa17.73■□□□□ 0.43
CNOT9-208ENST00000542068 CASP7P55210 303 aa17.73■□□□□ 0.43
CNOT9-208ENST00000542068 TPM4P67936 248 aa17.73■□□□□ 0.43
CNOT9-208ENST00000542068 PIGBQ92521 554 aa17.73■□□□□ 0.43
CNOT9-208ENST00000542068 MYL10Q9BUA6 226 aa17.73■□□□□ 0.43
CNOT9-208ENST00000542068 MORC2Q9Y6X9 1032 aaPredicted RBP17.73■□□□□ 0.43
CNOT9-208ENST00000542068 CHD2O14647 1828 aaKnown RBP17.72■□□□□ 0.43
CNOT9-208ENST00000542068 PFKFB1P16118 471 aa17.72■□□□□ 0.43
CNOT9-208ENST00000542068 FANCCQ00597 558 aa17.72■□□□□ 0.43
CNOT9-208ENST00000542068 PHKBQ93100 1093 aa17.72■□□□□ 0.43
CNOT9-208ENST00000542068 RGPD5Q99666 1765 aa17.72■□□□□ 0.43
CNOT9-208ENST00000542068 NRDCO43847 1150 aa17.72■□□□□ 0.43
CNOT9-208ENST00000542068 PNOCQ13519 176 aa17.72■□□□□ 0.43
CNOT9-208ENST00000542068 ZMYM1Q5SVZ6 1142 aa17.72■□□□□ 0.43
CNOT9-208ENST00000542068 ZNF446Q9NWS9 450 aa17.72■□□□□ 0.43
CNOT9-208ENST00000542068 MARF1Q9Y4F3 1742 aaKnown RBP17.71■□□□□ 0.43
CNOT9-208ENST00000542068 MYSM1Q5VVJ2 828 aa17.71■□□□□ 0.43
CNOT9-208ENST00000542068 MNS1Q8NEH6 495 aa17.71■□□□□ 0.43
CNOT9-208ENST00000542068 UBE2Q2LH0YL09 131 aa17.71■□□□□ 0.43
CNOT9-208ENST00000542068 GPAA1O43292 621 aa17.71■□□□□ 0.43
CNOT9-208ENST00000542068 SYCP1Q15431 976 aa17.71■□□□□ 0.43
CNOT9-208ENST00000542068 TERF2Q15554 542 aa17.71■□□□□ 0.43
CNOT9-208ENST00000542068 TMEM232C9JQI7 657 aa17.71■□□□□ 0.42
CNOT9-208ENST00000542068 UBASH3AP57075 661 aa17.71■□□□□ 0.42
CNOT9-208ENST00000542068 HELLSQ9NRZ9 838 aa17.71■□□□□ 0.42
CNOT9-208ENST00000542068 RTEL1Q9NZ71 1219 aa17.71■□□□□ 0.42
CNOT9-208ENST00000542068 AKAP2Q9Y2D5 859 aa17.71■□□□□ 0.42
CNOT9-208ENST00000542068 IRS4O14654 1257 aaPredicted RBP17.7■□□□□ 0.42
CNOT9-208ENST00000542068 WDHD1O75717 1129 aaPredicted RBP17.7■□□□□ 0.42
CNOT9-208ENST00000542068 SEC31AO94979 1220 aaKnown RBP17.7■□□□□ 0.42
CNOT9-208ENST00000542068 DSCC1Q9BVC3 393 aa17.7■□□□□ 0.42
CNOT9-208ENST00000542068 ZSWIM4Q9H7M6 989 aa17.7■□□□□ 0.42
CNOT9-208ENST00000542068 ZBTB1Q9Y2K1 713 aa17.7■□□□□ 0.42
CNOT9-208ENST00000542068 CRYBG1Q9Y4K1 1723 aa17.7■□□□□ 0.42
CNOT9-208ENST00000542068 NUTM2BA6NNL0 878 aaPredicted RBP17.69■□□□□ 0.42
CNOT9-208ENST00000542068 NUTM2EB1AL46 878 aaPredicted RBP17.69■□□□□ 0.42
CNOT9-208ENST00000542068 ERVV-2B6SEH9 535 aa17.69■□□□□ 0.42
CNOT9-208ENST00000542068 NUTM2AQ8IVF1 878 aaPredicted RBP17.69■□□□□ 0.42
CNOT9-208ENST00000542068 KLHL34Q8N239 644 aa17.69■□□□□ 0.42
CNOT9-208ENST00000542068 SH3TC1Q8TE82 1336 aa17.69■□□□□ 0.42
CNOT9-208ENST00000542068 MST1RQ04912 1400 aa17.69■□□□□ 0.42
CNOT9-208ENST00000542068 SYKP43405 635 aa17.69■□□□□ 0.42
CNOT9-208ENST00000542068 ANO1Q5XXA6 986 aa17.69■□□□□ 0.42
CNOT9-208ENST00000542068 BICDL1Q6ZP65 573 aa17.69■□□□□ 0.42
CNOT9-208ENST00000542068 UBXN4Q92575 508 aa17.69■□□□□ 0.42
CNOT9-208ENST00000542068 ZKSCAN3Q9BRR0 538 aa17.69■□□□□ 0.42
CNOT9-208ENST00000542068 CARD6Q9BX69 1037 aa17.69■□□□□ 0.42
CNOT9-208ENST00000542068 ANKRD18BA2A2Z9 1011 aa17.69■□□□□ 0.42
CNOT9-208ENST00000542068 CLCN6P51797 869 aa17.69■□□□□ 0.42
CNOT9-208ENST00000542068 LRRFIP1Q32MZ4 808 aaKnown RBP17.69■□□□□ 0.42
CNOT9-208ENST00000542068 FBXO18Q8NFZ0 1043 aa17.69■□□□□ 0.42
CNOT9-208ENST00000542068 KCNG4Q8TDN1 519 aa17.69■□□□□ 0.42
CNOT9-208ENST00000542068 ZNF274Q96GC6 653 aaPredicted RBP17.69■□□□□ 0.42
CNOT9-208ENST00000542068 MROH7-TTC4A0A0A0MT08 1334 aa17.69■□□□□ 0.42
CNOT9-208ENST00000542068 JCADQ9P266 1359 aa17.69■□□□□ 0.42
CNOT9-208ENST00000542068 TNS3Q68CZ2 1445 aa17.68■□□□□ 0.42
CNOT9-208ENST00000542068 GABPB1Q06547 395 aaPredicted RBP17.68■□□□□ 0.42
CNOT9-208ENST00000542068 NLRP12P59046 1061 aa17.68■□□□□ 0.42
CNOT9-208ENST00000542068 CCDC150Q8NCX0 1101 aa17.68■□□□□ 0.42
CNOT9-208ENST00000542068 NKX2-3Q8TAU0 364 aa17.68■□□□□ 0.42
CNOT9-208ENST00000542068 AIDAQ96BJ3 306 aa17.68■□□□□ 0.42
CNOT9-208ENST00000542068 MPHOSPH8Q99549 860 aa17.68■□□□□ 0.42
CNOT9-208ENST00000542068 ABCF2Q9UG63 623 aa17.68■□□□□ 0.42
CNOT9-208ENST00000542068 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.68■□□□□ 0.423e-6■□□□□ 9.4
CNOT9-208ENST00000542068 B4E1Z4 1266 aa17.67■□□□□ 0.42
CNOT9-208ENST00000542068 KCNQ4P56696 695 aa17.67■□□□□ 0.42
CNOT9-208ENST00000542068 ALG1Q9BT22 464 aa17.67■□□□□ 0.42
CNOT9-208ENST00000542068 FOXN1O15353 648 aa17.67■□□□□ 0.42
CNOT9-208ENST00000542068 ZNF827Q17R98 1081 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms