RNA–Protein interactions for RNA: ENST00000541841.1

CIT-211, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-211ENST00000541841 MFSD14AQ96MC6 490 aa8.75□□□□□ -1.01
CIT-211ENST00000541841 TRAIPQ9BWF2 469 aa8.75□□□□□ -1.01
CIT-211ENST00000541841 ZNF576Q9H609 170 aa8.75□□□□□ -1.01
CIT-211ENST00000541841 BIN2Q9UBW5 565 aaPredicted RBP8.75□□□□□ -1.01
CIT-211ENST00000541841 CD97P48960 835 aa8.74□□□□□ -1.01
CIT-211ENST00000541841 ZNF157P51786 506 aaPredicted RBP8.74□□□□□ -1.01
CIT-211ENST00000541841 CDPF1Q6NVV7 123 aa8.74□□□□□ -1.01
CIT-211ENST00000541841 PI16Q6UXB8 463 aa8.74□□□□□ -1.01
CIT-211ENST00000541841 SMG8Q8ND04 991 aaKnown RBP8.74□□□□□ -1.01
CIT-211ENST00000541841 TRIM56Q9BRZ2 755 aaKnown RBP8.74□□□□□ -1.01
CIT-211ENST00000541841 CYP4F12Q9HCS2 524 aa8.74□□□□□ -1.01
CIT-211ENST00000541841 GADD45BO75293 160 aaPredicted RBP8.73□□□□□ -1.01
CIT-211ENST00000541841 NEFLP07196 543 aa8.73□□□□□ -1.01
CIT-211ENST00000541841 EXOSC6Q5RKV6 272 aaKnown RBP8.73□□□□□ -1.01
CIT-211ENST00000541841 FBXL6Q8N531 539 aa8.73□□□□□ -1.01
CIT-211ENST00000541841 FBLIM1Q8WUP2 373 aa8.73□□□□□ -1.01
CIT-211ENST00000541841 DBNDD2Q9BQY9 259 aa8.73□□□□□ -1.01
CIT-211ENST00000541841 SUGCTQ9HAC7 445 aa8.73□□□□□ -1.01
CIT-211ENST00000541841 ABCB6Q9NP58 842 aa8.73□□□□□ -1.01
CIT-211ENST00000541841 PRR19A6NJB7 356 aa8.72□□□□□ -1.01
CIT-211ENST00000541841 POU4F3Q15319 338 aa8.72□□□□□ -1.01
CIT-211ENST00000541841 TMC7Q7Z402 723 aa8.72□□□□□ -1.01
CIT-211ENST00000541841 SLC51AQ86UW1 340 aa8.72□□□□□ -1.01
CIT-211ENST00000541841 AEBP1Q8IUX7 1158 aa8.72□□□□□ -1.01
CIT-211ENST00000541841 C2CD4AQ8NCU7 369 aaPredicted RBP8.72□□□□□ -1.01
CIT-211ENST00000541841 CITED4Q96RK1 184 aa8.72□□□□□ -1.01
CIT-211ENST00000541841 CSRNP1Q96S65 589 aa8.72□□□□□ -1.01
CIT-211ENST00000541841 WDR64B1ANS9 1081 aa8.71□□□□□ -1.02
CIT-211ENST00000541841 B3GALT4O96024 378 aa8.71□□□□□ -1.02
CIT-211ENST00000541841 GRM2Q14416 872 aa8.71□□□□□ -1.02
CIT-211ENST00000541841 RBCK1Q9BYM8 510 aa8.71□□□□□ -1.02
CIT-211ENST00000541841 KRTAP4-8Q9BYQ9 185 aa8.71□□□□□ -1.02
CIT-211ENST00000541841 HIF3AQ9Y2N7 669 aa8.71□□□□□ -1.02
CIT-211ENST00000541841 ADAMTS4O75173 837 aa8.7□□□□□ -1.02
CIT-211ENST00000541841 ADH5P11766 374 aa8.7□□□□□ -1.02
CIT-211ENST00000541841 ITPKAP23677 461 aa8.7□□□□□ -1.02
CIT-211ENST00000541841 USP11P51784 963 aa8.7□□□□□ -1.02
CIT-211ENST00000541841 SOX4Q06945 474 aaPredicted RBP8.7□□□□□ -1.02
CIT-211ENST00000541841 FAAP100Q0VG06 881 aa8.7□□□□□ -1.02
CIT-211ENST00000541841 NFKBIBQ15653 356 aa8.7□□□□□ -1.02
CIT-211ENST00000541841 GLIS3Q8NEA6 775 aa8.7□□□□□ -1.02
CIT-211ENST00000541841 ZC3H12CQ9C0D7 883 aaKnown RBP8.7□□□□□ -1.02
CIT-211ENST00000541841 ACTL7BQ9Y614 415 aa8.7□□□□□ -1.02
CIT-211ENST00000541841 COBLO75128 1261 aa8.69□□□□□ -1.02
CIT-211ENST00000541841 RAB6AP20340 208 aa8.69□□□□□ -1.02
CIT-211ENST00000541841 HOXA10P31260 410 aaPredicted RBP8.69□□□□□ -1.02
CIT-211ENST00000541841 PDE4CQ08493 712 aa8.69□□□□□ -1.02
CIT-211ENST00000541841 AKAP4Q5JQC9 854 aa8.69□□□□□ -1.02
CIT-211ENST00000541841 PSMG3-AS1Q96PY0 264 aa8.69□□□□□ -1.02
CIT-211ENST00000541841 CORO1BQ9BR76 489 aa8.69□□□□□ -1.02
CIT-211ENST00000541841 DNAJC25Q9H1X3 360 aa8.69□□□□□ -1.02
CIT-211ENST00000541841 TMEM238LA0A1B0GVL6 79 aa8.68□□□□□ -1.02
CIT-211ENST00000541841 FAM95CA0A1B0GW59 222 aa8.68□□□□□ -1.02
CIT-211ENST00000541841 CYP11A1P05108 521 aa8.68□□□□□ -1.02
CIT-211ENST00000541841 F13BP05160 661 aa8.68□□□□□ -1.02
CIT-211ENST00000541841 DYMQ7RTS9 669 aa8.68□□□□□ -1.02
CIT-211ENST00000541841 ALKBH8Q96BT7 664 aaKnown RBP8.68□□□□□ -1.02
CIT-211ENST00000541841 DMRTB1Q96MA1 342 aa8.68□□□□□ -1.02
CIT-211ENST00000541841 DCTN4Q9UJW0 460 aa8.68□□□□□ -1.02
CIT-211ENST00000541841 AP4E1Q9UPM8 1137 aa8.68□□□□□ -1.02
CIT-211ENST00000541841 BRD1O95696 1058 aa8.67□□□□□ -1.02
CIT-211ENST00000541841 MAPK1P28482 360 aa8.67□□□□□ -1.02
CIT-211ENST00000541841 ADMP35318 185 aa8.67□□□□□ -1.02
CIT-211ENST00000541841 PDE3AQ14432 1141 aa8.67□□□□□ -1.02
CIT-211ENST00000541841 RAD18Q9NS91 495 aa8.67□□□□□ -1.02
CIT-211ENST00000541841 FAM105AQ9NUU6 356 aa8.67□□□□□ -1.02
CIT-211ENST00000541841 GNEQ9Y223 722 aaKnown RBP8.67□□□□□ -1.02
CIT-211ENST00000541841 KIAA1324LA8MWY0 1029 aaPredicted RBP8.66□□□□□ -1.02
CIT-211ENST00000541841 FCGRTP55899 365 aa8.66□□□□□ -1.02
CIT-211ENST00000541841 PRPF40BQ6NWY9 871 aaKnown RBP8.66□□□□□ -1.02
CIT-211ENST00000541841 WDR89Q96FK6 387 aaPredicted RBP8.66□□□□□ -1.02
CIT-211ENST00000541841 LGR6Q9HBX8 967 aa8.66□□□□□ -1.02
CIT-211ENST00000541841 PNMA6FA0A0J9YX94 578 aa8.65□□□□□ -1.02
CIT-211ENST00000541841 NFICP08651 508 aa8.65□□□□□ -1.02
CIT-211ENST00000541841 LIG1P18858 919 aa8.65□□□□□ -1.02
CIT-211ENST00000541841 SPINK2P20155 84 aa8.65□□□□□ -1.02
CIT-211ENST00000541841 PAOXQ6QHF9 649 aa8.65□□□□□ -1.02
CIT-211ENST00000541841 SETDB2Q96T68 719 aa8.65□□□□□ -1.02
CIT-211ENST00000541841 IVNS1ABPQ9Y6Y0 642 aa8.65□□□□□ -1.02
CIT-211ENST00000541841 GRIK1P39086 918 aa8.64□□□□□ -1.03
CIT-211ENST00000541841 DTHD1Q6ZMT9 781 aa8.64□□□□□ -1.03
CIT-211ENST00000541841 WDR18Q9BV38 432 aa8.64□□□□□ -1.03
CIT-211ENST00000541841 BCO2Q9BYV7 579 aa8.64□□□□□ -1.03
CIT-211ENST00000541841 FAM170BA6NMN3 283 aa8.63□□□□□ -1.03
CIT-211ENST00000541841 AOC2O75106 756 aa8.63□□□□□ -1.03
CIT-211ENST00000541841 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.63□□□□□ -1.03
CIT-211ENST00000541841 RGS22Q8NE09 1264 aa8.63□□□□□ -1.03
CIT-211ENST00000541841 DDX54Q8TDD1 881 aaKnown RBP8.63□□□□□ -1.03
CIT-211ENST00000541841 TBC1D32Q96NH3 1257 aa8.63□□□□□ -1.03
CIT-211ENST00000541841 CCDC86Q9H6F5 360 aaKnown RBP8.63□□□□□ -1.03
CIT-211ENST00000541841 ATG3Q9NT62 314 aa8.63□□□□□ -1.03
CIT-211ENST00000541841 NLRP2Q9NX02 1062 aa8.63□□□□□ -1.03
CIT-211ENST00000541841 PRKAG2Q9UGJ0 569 aa8.63□□□□□ -1.03
CIT-211ENST00000541841 GPN3Q9UHW5 284 aaPredicted RBP8.63□□□□□ -1.03
CIT-211ENST00000541841 PPP1R9AQ9ULJ8 1098 aa8.63□□□□□ -1.03
CIT-211ENST00000541841 TRAK1Q9UPV9 953 aa8.63□□□□□ -1.03
CIT-211ENST00000541841 OAS3Q9Y6K5 1087 aaKnown RBP8.63□□□□□ -1.03
CIT-211ENST00000541841 DYNC1LI2O43237 492 aaPredicted RBP8.62□□□□□ -1.03
CIT-211ENST00000541841 ASPAP45381 313 aa8.62□□□□□ -1.03
CIT-211ENST00000541841 PTPN12Q05209 780 aaKnown RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms