RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 SMAP1Q8IYB5 467 aaPredicted RBP11.17□□□□□ -0.62
CNOT4-212ENST00000541284 LINC00301Q8NCQ3 95 aa11.17□□□□□ -0.62
CNOT4-212ENST00000541284 KCND1Q9NSA2 647 aa11.17□□□□□ -0.62
CNOT4-212ENST00000541284 DENND2AQ9ULE3 1009 aa11.17□□□□□ -0.62
CNOT4-212ENST00000541284 CSB-PGBD3P0DP91 1061 aa11.17□□□□□ -0.62
CNOT4-212ENST00000541284 ARID3AQ99856 593 aa11.17□□□□□ -0.62
CNOT4-212ENST00000541284 GJB4Q9NTQ9 266 aa11.17□□□□□ -0.62
CNOT4-212ENST00000541284 CLIC4Q9Y696 253 aa11.17□□□□□ -0.62
CNOT4-212ENST00000541284 CDHR2Q9BYE9 1310 aa11.17□□□□□ -0.62
CNOT4-212ENST00000541284 PUS7LQ9H0K6 701 aaKnown RBP11.17□□□□□ -0.62
CNOT4-212ENST00000541284 RTL9Q8NET4 1388 aa11.16□□□□□ -0.62
CNOT4-212ENST00000541284 A0A1W2PQ27 194 aa11.16□□□□□ -0.62
CNOT4-212ENST00000541284 A0A1W2PQ64 194 aa11.16□□□□□ -0.62
CNOT4-212ENST00000541284 A0A1W2PQD8 194 aa11.16□□□□□ -0.62
CNOT4-212ENST00000541284 CSF1RP07333 972 aa11.16□□□□□ -0.62
CNOT4-212ENST00000541284 ZSCAN20P17040 1043 aaPredicted RBP11.16□□□□□ -0.62
CNOT4-212ENST00000541284 NDUFA8P51970 172 aa11.16□□□□□ -0.62
CNOT4-212ENST00000541284 PI16Q6UXB8 463 aa11.16□□□□□ -0.62
CNOT4-212ENST00000541284 PIGBQ92521 554 aa11.16□□□□□ -0.62
CNOT4-212ENST00000541284 C16orf45Q96MC5 204 aaPredicted RBP11.16□□□□□ -0.62
CNOT4-212ENST00000541284 FGAP02671 866 aa11.16□□□□□ -0.62
CNOT4-212ENST00000541284 AXDND1Q5T1B0 1012 aaPredicted RBP11.16□□□□□ -0.62
CNOT4-212ENST00000541284 FSIP1Q8NA03 581 aa11.16□□□□□ -0.62
CNOT4-212ENST00000541284 HSD3B7Q9H2F3 369 aa11.16□□□□□ -0.62
CNOT4-212ENST00000541284 MROH7-TTC4A0A0A0MT08 1334 aa11.16□□□□□ -0.62
CNOT4-212ENST00000541284 SMTNL1A8MU46 457 aa11.16□□□□□ -0.62
CNOT4-212ENST00000541284 NAA30Q147X3 362 aaPredicted RBP11.16□□□□□ -0.62
CNOT4-212ENST00000541284 ADALQ6DHV7 355 aa11.16□□□□□ -0.62
CNOT4-212ENST00000541284 XAGE2Q96GT9 111 aa11.16□□□□□ -0.62
CNOT4-212ENST00000541284 RGL2O15211 777 aa11.15□□□□□ -0.62
CNOT4-212ENST00000541284 SYCP1Q15431 976 aa11.15□□□□□ -0.62
CNOT4-212ENST00000541284 NCAPHQ15003 741 aa11.15□□□□□ -0.62
CNOT4-212ENST00000541284 VGLL2Q8N8G2 317 aa11.15□□□□□ -0.62
CNOT4-212ENST00000541284 POLR3EQ9NVU0 708 aa11.15□□□□□ -0.62
CNOT4-212ENST00000541284 ZAP70P43403 619 aa11.15□□□□□ -0.63
CNOT4-212ENST00000541284 DPCR1Q3MIW9 517 aa11.15□□□□□ -0.63
CNOT4-212ENST00000541284 HSP90AB3PQ58FF7 597 aa11.15□□□□□ -0.63
CNOT4-212ENST00000541284 PPP4R3BQ5MIZ7 849 aa11.15□□□□□ -0.63
CNOT4-212ENST00000541284 FBXO18Q8NFZ0 1043 aa11.15□□□□□ -0.63
CNOT4-212ENST00000541284 ZNF396Q96N95 335 aaPredicted RBP11.15□□□□□ -0.63
CNOT4-212ENST00000541284 A0A1B0GVL5 298 aa11.14□□□□□ -0.63
CNOT4-212ENST00000541284 CYP19A1P11511 503 aaPredicted RBP11.14□□□□□ -0.63
CNOT4-212ENST00000541284 HAND2P61296 217 aa11.14□□□□□ -0.63
CNOT4-212ENST00000541284 MRPS27Q92552 414 aaKnown RBP11.14□□□□□ -0.63
CNOT4-212ENST00000541284 BPIFA3Q9BQP9 254 aa11.14□□□□□ -0.63
CNOT4-212ENST00000541284 WDR19Q8NEZ3 1342 aa11.14□□□□□ -0.63
CNOT4-212ENST00000541284 TNNT1P13805 278 aa11.14□□□□□ -0.63
CNOT4-212ENST00000541284 TCIRG1Q13488 830 aa11.14□□□□□ -0.63
CNOT4-212ENST00000541284 SYNE4Q8N205 404 aa11.14□□□□□ -0.63
CNOT4-212ENST00000541284 AOPEPQ8N6M6 819 aa11.14□□□□□ -0.63
CNOT4-212ENST00000541284 PKNOX2Q96KN3 472 aa11.14□□□□□ -0.63
CNOT4-212ENST00000541284 OSBPL5Q9H0X9 879 aaPredicted RBP11.14□□□□□ -0.63
CNOT4-212ENST00000541284 FBXO3Q9UK99 471 aa11.14□□□□□ -0.63
CNOT4-212ENST00000541284 PRC1O43663 620 aa11.13□□□□□ -0.63
CNOT4-212ENST00000541284 KIF23Q02241 960 aaPredicted RBP11.13□□□□□ -0.63
CNOT4-212ENST00000541284 PRDM11Q9NQV5 511 aa11.13□□□□□ -0.63
CNOT4-212ENST00000541284 RIPOR2Q9Y4F9 1068 aa11.13□□□□□ -0.63
CNOT4-212ENST00000541284 CCDC88AQ3V6T2 1871 aa11.13□□□□□ -0.63
CNOT4-212ENST00000541284 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.13□□□□□ -0.63
CNOT4-212ENST00000541284 WDHD1O75717 1129 aaPredicted RBP11.13□□□□□ -0.63
CNOT4-212ENST00000541284 YEATS4O95619 227 aa11.13□□□□□ -0.63
CNOT4-212ENST00000541284 MCAMP43121 646 aa11.13□□□□□ -0.63
CNOT4-212ENST00000541284 FGD1P98174 961 aa11.13□□□□□ -0.63
CNOT4-212ENST00000541284 MYSM1Q5VVJ2 828 aa11.13□□□□□ -0.63
CNOT4-212ENST00000541284 CCDC73Q6ZRK6 1079 aa11.13□□□□□ -0.63
CNOT4-212ENST00000541284 APPBP2Q92624 585 aa11.13□□□□□ -0.63
CNOT4-212ENST00000541284 ANO10Q9NW15 660 aa11.13□□□□□ -0.63
CNOT4-212ENST00000541284 TACC3Q9Y6A5 838 aa11.13□□□□□ -0.63
CNOT4-212ENST00000541284 ME1P48163 572 aa11.13□□□□□ -0.63
CNOT4-212ENST00000541284 TBC1D10CQ8IV04 446 aa11.13□□□□□ -0.63
CNOT4-212ENST00000541284 DRC7Q8IY82 874 aa11.13□□□□□ -0.63
CNOT4-212ENST00000541284 SENP2Q9HC62 589 aa11.13□□□□□ -0.63
CNOT4-212ENST00000541284 KIAA1468Q9P260 1216 aa11.13□□□□□ -0.63
CNOT4-212ENST00000541284 COL11A2P13942 1736 aaPredicted RBP11.12□□□□□ -0.63
CNOT4-212ENST00000541284 KLF18A0A0U1RQI7 1052 aa11.12□□□□□ -0.63
CNOT4-212ENST00000541284 CCDC69A6NI79 296 aa11.12□□□□□ -0.63
CNOT4-212ENST00000541284 KINO60870 393 aaKnown RBP11.12□□□□□ -0.63
CNOT4-212ENST00000541284 PCCAP05165 728 aaPredicted RBP11.12□□□□□ -0.63
CNOT4-212ENST00000541284 FKBP4Q02790 459 aaKnown RBP eCLIP11.12□□□□□ -0.63
CNOT4-212ENST00000541284 CYB5R4Q7L1T6 521 aa11.12□□□□□ -0.63
CNOT4-212ENST00000541284 RGS22Q8NE09 1264 aa11.12□□□□□ -0.63
CNOT4-212ENST00000541284 PSME4Q14997 1843 aa11.12□□□□□ -0.63
CNOT4-212ENST00000541284 U2AF2P26368 475 aaKnown RBP eCLIP11.12□□□□□ -0.635e-7■■■■■ 54.6
CNOT4-212ENST00000541284 RAB11FIP4Q86YS3 637 aa11.12□□□□□ -0.63
CNOT4-212ENST00000541284 PDCL2Q8N4E4 241 aa11.12□□□□□ -0.63
CNOT4-212ENST00000541284 AIFM3Q96NN9 605 aa11.12□□□□□ -0.63
CNOT4-212ENST00000541284 PRDM10Q9NQV6 1147 aa11.12□□□□□ -0.63
CNOT4-212ENST00000541284 CEP126Q9P2H0 1117 aa11.12□□□□□ -0.63
CNOT4-212ENST00000541284 HPSEQ9Y251 543 aa11.12□□□□□ -0.63
CNOT4-212ENST00000541284 FAM237AA0A1B0GTK4 181 aa11.12□□□□□ -0.63
CNOT4-212ENST00000541284 ZFYP08048 801 aaPredicted RBP11.12□□□□□ -0.63
CNOT4-212ENST00000541284 ARMCX5Q6P1M9 558 aa11.12□□□□□ -0.63
CNOT4-212ENST00000541284 TCRBV5S4A2TA0A5A2 114 aa11.11□□□□□ -0.63
CNOT4-212ENST00000541284 GPAA1O43292 621 aa11.11□□□□□ -0.63
CNOT4-212ENST00000541284 PTPAQ15257 358 aa11.11□□□□□ -0.63
CNOT4-212ENST00000541284 CCAR2Q8N163 923 aaKnown RBP11.11□□□□□ -0.63
CNOT4-212ENST00000541284 FAM217BQ9NTX9 383 aaPredicted RBP11.11□□□□□ -0.63
CNOT4-212ENST00000541284 CTNNA3Q9UI47 895 aa11.11□□□□□ -0.63
CNOT4-212ENST00000541284 GOLGA8BA8MQT2 603 aa11.11□□□□□ -0.63
CNOT4-212ENST00000541284 POLR3DP05423 398 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms