RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 BRF1Q92994 677 aa20.26■□□□□ 0.83
LTBR-207ENST00000539925 SALL1Q9NSC2 1324 aa20.26■□□□□ 0.83
LTBR-207ENST00000539925 SYT1P21579 422 aa20.26■□□□□ 0.83
LTBR-207ENST00000539925 IFNL3Q8IZI9 196 aa20.26■□□□□ 0.83
LTBR-207ENST00000539925 WDR66Q8TBY9 1149 aa20.26■□□□□ 0.83
LTBR-207ENST00000539925 TCEANC2Q96MN5 208 aa20.26■□□□□ 0.83
LTBR-207ENST00000539925 LARP6Q9BRS8 491 aaKnown RBP20.26■□□□□ 0.83
LTBR-207ENST00000539925 PODXL2Q9NZ53 605 aa20.26■□□□□ 0.83
LTBR-207ENST00000539925 MAGEB6P1A0A0J9YX57 407 aa20.25■□□□□ 0.83
LTBR-207ENST00000539925 HMGN5P82970 282 aaKnown RBP20.25■□□□□ 0.83
LTBR-207ENST00000539925 ZNF827Q17R98 1081 aa20.25■□□□□ 0.83
LTBR-207ENST00000539925 MCTP1Q6DN14 999 aa20.25■□□□□ 0.83
LTBR-207ENST00000539925 NAA16Q6N069 864 aaPredicted RBP20.25■□□□□ 0.83
LTBR-207ENST00000539925 GIMAP6Q6P9H5 292 aa20.25■□□□□ 0.83
LTBR-207ENST00000539925 MB21D2Q8IYB1 491 aaPredicted RBP20.25■□□□□ 0.83
LTBR-207ENST00000539925 MTA3Q9BTC8 594 aa20.25■□□□□ 0.83
LTBR-207ENST00000539925 RNF41Q9H4P4 317 aaPredicted RBP20.25■□□□□ 0.83
LTBR-207ENST00000539925 IRS2Q9Y4H2 1338 aa20.25■□□□□ 0.83
LTBR-207ENST00000539925 TAF1P21675 1872 aa20.24■□□□□ 0.83
LTBR-207ENST00000539925 DHX16O60231 1041 aaKnown RBP20.24■□□□□ 0.83
LTBR-207ENST00000539925 DEKP35659 375 aaKnown RBP20.24■□□□□ 0.83
LTBR-207ENST00000539925 COL23A1Q86Y22 540 aaPredicted RBP20.24■□□□□ 0.83
LTBR-207ENST00000539925 NECAB1Q8N987 351 aa20.24■□□□□ 0.83
LTBR-207ENST00000539925 SLC4A4Q9Y6R1 1079 aa20.24■□□□□ 0.83
LTBR-207ENST00000539925 DUOX1Q9NRD9 1551 aa20.24■□□□□ 0.83
LTBR-207ENST00000539925 PDE6BP35913 854 aa20.23■□□□□ 0.83
LTBR-207ENST00000539925 HAND2P61296 217 aa20.23■□□□□ 0.83
LTBR-207ENST00000539925 ST3GAL1Q11201 340 aa20.23■□□□□ 0.83
LTBR-207ENST00000539925 CSPP1Q1MSJ5 1256 aa20.23■□□□□ 0.83
LTBR-207ENST00000539925 KLHL40Q2TBA0 621 aa20.23■□□□□ 0.83
LTBR-207ENST00000539925 CERS3Q8IU89 383 aa20.23■□□□□ 0.83
LTBR-207ENST00000539925 KRT23Q9C075 422 aa20.23■□□□□ 0.83
LTBR-207ENST00000539925 ARMT1Q9H993 441 aa20.23■□□□□ 0.83
LTBR-207ENST00000539925 GGA1Q9UJY5 639 aa20.23■□□□□ 0.83
LTBR-207ENST00000539925 ISY1Q9ULR0 285 aaKnown RBP20.23■□□□□ 0.83
LTBR-207ENST00000539925 PARP3Q9Y6F1 533 aa20.23■□□□□ 0.83
LTBR-207ENST00000539925 COL1A1P02452 1464 aaPredicted RBP20.23■□□□□ 0.83
LTBR-207ENST00000539925 GSG1L2A8MUP6 293 aa20.22■□□□□ 0.83
LTBR-207ENST00000539925 PRC1O43663 620 aa20.22■□□□□ 0.83
LTBR-207ENST00000539925 PCP11498 1178 aaKnown RBP20.22■□□□□ 0.83
LTBR-207ENST00000539925 TDO2P48775 406 aa20.22■□□□□ 0.83
LTBR-207ENST00000539925 TMEM87BQ96K49 555 aa20.22■□□□□ 0.83
LTBR-207ENST00000539925 IQSEC3Q9UPP2 1182 aaPredicted RBP20.22■□□□□ 0.83
LTBR-207ENST00000539925 NPR1P16066 1061 aa20.22■□□□□ 0.83
LTBR-207ENST00000539925 NT5C2P49902 561 aa20.22■□□□□ 0.83
LTBR-207ENST00000539925 LARP1BQ659C4 914 aaKnown RBP20.22■□□□□ 0.83
LTBR-207ENST00000539925 TDRD7Q8NHU6 1098 aaKnown RBP20.22■□□□□ 0.83
LTBR-207ENST00000539925 LAMA4Q16363 1823 aa20.21■□□□□ 0.83
LTBR-207ENST00000539925 MYO5AQ9Y4I1 1855 aaKnown RBP20.21■□□□□ 0.83
LTBR-207ENST00000539925 F13A1P00488 732 aa20.21■□□□□ 0.83
LTBR-207ENST00000539925 ALDH1B1P30837 517 aa20.21■□□□□ 0.83
LTBR-207ENST00000539925 GSTO1P78417 241 aa20.21■□□□□ 0.83
LTBR-207ENST00000539925 SP8Q8IXZ3 490 aa20.21■□□□□ 0.83
LTBR-207ENST00000539925 LCORLQ8N3X6 602 aa20.21■□□□□ 0.83
LTBR-207ENST00000539925 TNS1Q9HBL0 1735 aaKnown RBP20.2■□□□□ 0.82
LTBR-207ENST00000539925 NRXN2Q9P2S2 1712 aa20.2■□□□□ 0.82
LTBR-207ENST00000539925 MBD3O95983 291 aa20.2■□□□□ 0.82
LTBR-207ENST00000539925 RGS22Q8NE09 1264 aa20.2■□□□□ 0.82
LTBR-207ENST00000539925 NSUN4Q96CB9 384 aaKnown RBP20.2■□□□□ 0.82
LTBR-207ENST00000539925 TMX4Q9H1E5 349 aaPredicted RBP20.2■□□□□ 0.82
LTBR-207ENST00000539925 EPB41L4AQ9HCS5 686 aaPredicted RBP20.2■□□□□ 0.82
LTBR-207ENST00000539925 ANAPC4Q9UJX5 808 aa20.2■□□□□ 0.82
LTBR-207ENST00000539925 COL9A3Q14050 684 aaPredicted RBP20.19■□□□□ 0.82
LTBR-207ENST00000539925 AKNAD1Q5T1N1 836 aa20.19■□□□□ 0.82
LTBR-207ENST00000539925 SMARCC2Q8TAQ2 1214 aa20.19■□□□□ 0.82
LTBR-207ENST00000539925 FBXO41Q8TF61 875 aa20.19■□□□□ 0.82
LTBR-207ENST00000539925 STAG1Q8WVM7 1258 aa20.19■□□□□ 0.82
LTBR-207ENST00000539925 LMBRD1Q9NUN5 540 aa20.19■□□□□ 0.82
LTBR-207ENST00000539925 MTMR6Q9Y217 621 aa20.19■□□□□ 0.82
LTBR-207ENST00000539925 DDX49Q9Y6V7 483 aaKnown RBP20.19■□□□□ 0.82
LTBR-207ENST00000539925 UFL1O94874 794 aa20.19■□□□□ 0.82
LTBR-207ENST00000539925 NCLP19338 710 aaKnown RBP20.19■□□□□ 0.82
LTBR-207ENST00000539925 KLRK1P26718 216 aa20.19■□□□□ 0.82
LTBR-207ENST00000539925 PDIA3P30101 505 aaKnown RBP20.19■□□□□ 0.82
LTBR-207ENST00000539925 GPSM2P81274 684 aa20.19■□□□□ 0.82
LTBR-207ENST00000539925 APOBRQ0VD83 1088 aa20.19■□□□□ 0.82
LTBR-207ENST00000539925 STK3Q13188 491 aa20.19■□□□□ 0.82
LTBR-207ENST00000539925 MFSD6Q6ZSS7 791 aa20.19■□□□□ 0.82
LTBR-207ENST00000539925 FAM184AQ8NB25 1140 aa20.19■□□□□ 0.82
LTBR-207ENST00000539925 RIOK1Q9BRS2 568 aaKnown RBP20.19■□□□□ 0.82
LTBR-207ENST00000539925 CRNKL1Q9BZJ0 848 aaKnown RBP20.19■□□□□ 0.82
LTBR-207ENST00000539925 ANGEL1Q9UNK9 670 aaKnown RBP20.19■□□□□ 0.82
LTBR-207ENST00000539925 NSFL1CQ9UNZ2 370 aaKnown RBP20.19■□□□□ 0.82
LTBR-207ENST00000539925 TIAM2Q8IVF5 1701 aa20.18■□□□□ 0.82
LTBR-207ENST00000539925 A0A0G2JLW4 131 aa20.18■□□□□ 0.82
LTBR-207ENST00000539925 LDHCP07864 332 aa20.18■□□□□ 0.82
LTBR-207ENST00000539925 SCRN1Q12765 414 aa20.18■□□□□ 0.82
LTBR-207ENST00000539925 SART3Q15020 963 aaKnown RBP20.18■□□□□ 0.82
LTBR-207ENST00000539925 TBC1D10CQ8IV04 446 aa20.18■□□□□ 0.82
LTBR-207ENST00000539925 TMEM87AQ8NBN3 555 aa20.18■□□□□ 0.82
LTBR-207ENST00000539925 LRRC2Q9BYS8 371 aa20.18■□□□□ 0.82
LTBR-207ENST00000539925 MYH13Q9UKX3 1938 aa20.18■□□□□ 0.82
LTBR-207ENST00000539925 CACNA1SQ13698 1873 aa20.18■□□□□ 0.82
LTBR-207ENST00000539925 WTIPA6NIX2 430 aaPredicted RBP20.17■□□□□ 0.82
LTBR-207ENST00000539925 PPEF1O14829 653 aaPredicted RBP20.17■□□□□ 0.82
LTBR-207ENST00000539925 MECOMQ03112 1051 aa20.17■□□□□ 0.82
LTBR-207ENST00000539925 CHAF1AQ13111 956 aaPredicted RBP20.17■□□□□ 0.82
LTBR-207ENST00000539925 DZIP1Q86YF9 867 aaKnown RBP20.17■□□□□ 0.82
LTBR-207ENST00000539925 TMTC2Q8N394 836 aa20.17■□□□□ 0.82
LTBR-207ENST00000539925 MIGA1Q8NAN2 632 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms