RNA–Protein interactions for RNA: ENST00000539369.1

LDHC-206, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 881 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-206ENST00000539369 ROBO1Q9Y6N7 1651 aa7.57□□□□□ -1.2
LDHC-206ENST00000539369 CAMSAP2Q08AD1 1489 aa7.56□□□□□ -1.2
LDHC-206ENST00000539369 UBR1Q8IWV7 1749 aa7.56□□□□□ -1.2
LDHC-206ENST00000539369 CEP162Q5TB80 1403 aa7.56□□□□□ -1.2
LDHC-206ENST00000539369 TARSP26639 723 aaKnown RBP7.56□□□□□ -1.2
LDHC-206ENST00000539369 GPLD1P80108 840 aa7.56□□□□□ -1.2
LDHC-206ENST00000539369 ZDHHC13Q8IUH4 622 aa7.56□□□□□ -1.2
LDHC-206ENST00000539369 IFT43Q96FT9 208 aa7.56□□□□□ -1.2
LDHC-206ENST00000539369 KRTAP4-2Q9BYR5 136 aa7.56□□□□□ -1.2
LDHC-206ENST00000539369 NOVA2Q9UNW9 492 aaKnown RBP7.56□□□□□ -1.2
LDHC-206ENST00000539369 HFE2Q6ZVN8 426 aa7.55□□□□□ -1.2
LDHC-206ENST00000539369 MYO19Q96H55 970 aa7.55□□□□□ -1.2
LDHC-206ENST00000539369 UBL7Q96S82 380 aaPredicted RBP7.55□□□□□ -1.2
LDHC-206ENST00000539369 EHBP1L1Q8N3D4 1523 aa7.55□□□□□ -1.2
LDHC-206ENST00000539369 LRP6O75581 1613 aa7.55□□□□□ -1.2
LDHC-206ENST00000539369 MROH1Q8NDA8 1641 aa7.55□□□□□ -1.2
LDHC-206ENST00000539369 JCADQ9P266 1359 aa7.55□□□□□ -1.2
LDHC-206ENST00000539369 KCNA6P17658 529 aa7.54□□□□□ -1.2
LDHC-206ENST00000539369 ARSDP51689 593 aa7.54□□□□□ -1.2
LDHC-206ENST00000539369 C11orf91Q3C1V1 193 aa7.54□□□□□ -1.2
LDHC-206ENST00000539369 EID1Q9Y6B2 187 aa7.54□□□□□ -1.2
LDHC-206ENST00000539369 TMEM2Q9UHN6 1383 aa7.54□□□□□ -1.2
LDHC-206ENST00000539369 PTCD1O75127 700 aaKnown RBP7.53□□□□□ -1.2
LDHC-206ENST00000539369 MICAL2O94851 1124 aa7.53□□□□□ -1.2
LDHC-206ENST00000539369 TSPY4P0CV99 314 aa7.53□□□□□ -1.2
LDHC-206ENST00000539369 TSPY10P0CW01 314 aa7.53□□□□□ -1.2
LDHC-206ENST00000539369 SETDB1Q15047 1291 aa7.53□□□□□ -1.2
LDHC-206ENST00000539369 SWI5Q1ZZU3 235 aa7.53□□□□□ -1.2
LDHC-206ENST00000539369 SLC26A8Q96RN1 970 aa7.53□□□□□ -1.2
LDHC-206ENST00000539369 LRFN2Q9ULH4 789 aa7.53□□□□□ -1.2
LDHC-206ENST00000539369 LRRC9Q6ZRR7 1453 aa7.53□□□□□ -1.2
LDHC-206ENST00000539369 ARHGEF5Q12774 1597 aa7.53□□□□□ -1.2
LDHC-206ENST00000539369 PRDM15P57071 1507 aaPredicted RBP7.52□□□□□ -1.2
LDHC-206ENST00000539369 GSC2O15499 205 aa7.52□□□□□ -1.21
LDHC-206ENST00000539369 SASH3O75995 380 aa7.52□□□□□ -1.21
LDHC-206ENST00000539369 GLB1P16278 677 aa7.52□□□□□ -1.21
LDHC-206ENST00000539369 JAG1P78504 1218 aa7.52□□□□□ -1.21
LDHC-206ENST00000539369 FKBP5Q13451 457 aaPredicted RBP7.52□□□□□ -1.21
LDHC-206ENST00000539369 ARMC10Q8N2F6 343 aa7.52□□□□□ -1.21
LDHC-206ENST00000539369 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.52□□□□□ -1.21
LDHC-206ENST00000539369 SLAIN2Q9P270 581 aa7.52□□□□□ -1.21
LDHC-206ENST00000539369 STOML1Q9UBI4 398 aa7.52□□□□□ -1.21
LDHC-206ENST00000539369 ZMIZ1Q9ULJ6 1067 aa7.52□□□□□ -1.21
LDHC-206ENST00000539369 ACIN1Q9UKV3 1341 aaKnown RBP7.52□□□□□ -1.21
LDHC-206ENST00000539369 TET3O43151 1660 aa7.51□□□□□ -1.21
LDHC-206ENST00000539369 PRR19A6NJB7 356 aa7.51□□□□□ -1.21
LDHC-206ENST00000539369 RARAP10276 462 aa7.51□□□□□ -1.21
LDHC-206ENST00000539369 DTX1Q86Y01 620 aa7.51□□□□□ -1.21
LDHC-206ENST00000539369 PRIMPOLQ96LW4 560 aa7.51□□□□□ -1.21
LDHC-206ENST00000539369 C11orf16Q9NQ32 467 aa7.51□□□□□ -1.21
LDHC-206ENST00000539369 ADGRE2Q9UHX3 823 aa7.51□□□□□ -1.21
LDHC-206ENST00000539369 CEP152O94986 1710 aa7.51□□□□□ -1.21
LDHC-206ENST00000539369 COL16A1Q07092 1604 aaPredicted RBP7.51□□□□□ -1.21
LDHC-206ENST00000539369 ARHGAP31Q2M1Z3 1444 aa7.51□□□□□ -1.21
LDHC-206ENST00000539369 NKTRP30414 1462 aaKnown RBP7.5□□□□□ -1.21
LDHC-206ENST00000539369 PHLPP1O60346 1717 aa7.5□□□□□ -1.21
LDHC-206ENST00000539369 MSH6P52701 1360 aa7.5□□□□□ -1.21
LDHC-206ENST00000539369 PIK3C2BO00750 1634 aa7.5□□□□□ -1.21
LDHC-206ENST00000539369 EIF2AK4Q9P2K8 1649 aaKnown RBP7.5□□□□□ -1.21
LDHC-206ENST00000539369 PRMT3O60678 531 aa7.5□□□□□ -1.21
LDHC-206ENST00000539369 EIF2AK2P19525 551 aaKnown RBP7.5□□□□□ -1.21
LDHC-206ENST00000539369 NRLP54845 237 aa7.5□□□□□ -1.21
LDHC-206ENST00000539369 ELOAQ14241 798 aaKnown RBP7.5□□□□□ -1.21
LDHC-206ENST00000539369 ZNF772Q68DY9 489 aaPredicted RBP7.5□□□□□ -1.21
LDHC-206ENST00000539369 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.5□□□□□ -1.21
LDHC-206ENST00000539369 USP20Q9Y2K6 914 aa7.5□□□□□ -1.21
LDHC-206ENST00000539369 NWD1Q149M9 1564 aa7.5□□□□□ -1.21
LDHC-206ENST00000539369 SPATA31A6Q5VVP1 1343 aa7.5□□□□□ -1.21
LDHC-206ENST00000539369 EFCAB6Q5THR3 1501 aa7.49□□□□□ -1.21
LDHC-206ENST00000539369 OPLAHO14841 1288 aa7.49□□□□□ -1.21
LDHC-206ENST00000539369 RXRBP28702 533 aa7.49□□□□□ -1.21
LDHC-206ENST00000539369 NFIAQ12857 509 aa7.49□□□□□ -1.21
LDHC-206ENST00000539369 IDI1Q13907 227 aa7.49□□□□□ -1.21
LDHC-206ENST00000539369 COX20Q5RI15 118 aa7.49□□□□□ -1.21
LDHC-206ENST00000539369 MEX3CQ5U5Q3 659 aaKnown RBP7.49□□□□□ -1.21
LDHC-206ENST00000539369 GDF6Q6KF10 455 aaPredicted RBP7.49□□□□□ -1.21
LDHC-206ENST00000539369 TREML1Q86YW5 311 aa7.49□□□□□ -1.21
LDHC-206ENST00000539369 IL22RA1Q8N6P7 574 aa7.49□□□□□ -1.21
LDHC-206ENST00000539369 STK32AQ8WU08 396 aa7.49□□□□□ -1.21
LDHC-206ENST00000539369 PLD4Q96BZ4 506 aa7.49□□□□□ -1.21
LDHC-206ENST00000539369 RTCBQ9Y3I0 505 aaKnown RBP7.49□□□□□ -1.21
LDHC-206ENST00000539369 FGD6Q6ZV73 1430 aa7.49□□□□□ -1.21
LDHC-206ENST00000539369 MAST1Q9Y2H9 1570 aa7.49□□□□□ -1.21
LDHC-206ENST00000539369 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.48□□□□□ -1.21
LDHC-206ENST00000539369 J3QW42 95 aa7.48□□□□□ -1.21
LDHC-206ENST00000539369 WISP1O95388 367 aa7.48□□□□□ -1.21
LDHC-206ENST00000539369 OCLNQ16625 522 aa7.48□□□□□ -1.21
LDHC-206ENST00000539369 RGL4Q8IZJ4 473 aa7.48□□□□□ -1.21
LDHC-206ENST00000539369 CFAP65Q6ZU64 1925 aaKnown RBP7.48□□□□□ -1.21
LDHC-206ENST00000539369 CDK12Q9NYV4 1490 aaPredicted RBP7.48□□□□□ -1.21
LDHC-206ENST00000539369 DHX15O43143 795 aaKnown RBP7.47□□□□□ -1.21
LDHC-206ENST00000539369 EGFRP00533 1210 aa7.47□□□□□ -1.21
LDHC-206ENST00000539369 SRPK2P78362 688 aaKnown RBP7.47□□□□□ -1.21
LDHC-206ENST00000539369 LCE4AQ5TA78 99 aa7.47□□□□□ -1.21
LDHC-206ENST00000539369 INTS5Q6P9B9 1019 aaKnown RBP7.47□□□□□ -1.21
LDHC-206ENST00000539369 CMTR1Q8N1G2 835 aaKnown RBP7.47□□□□□ -1.21
LDHC-206ENST00000539369 GALNT11Q8NCW6 608 aa7.47□□□□□ -1.21
LDHC-206ENST00000539369 C7orf69Q9H7B7 122 aa7.47□□□□□ -1.21
LDHC-206ENST00000539369 SRA1Q9HD15 236 aaKnown RBP7.47□□□□□ -1.21
LDHC-206ENST00000539369 TLR7Q9NYK1 1049 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms