RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 MBD4O95243 580 aa10.47□□□□□ -0.73
GGA3-202ENST00000538886 VEGFAP15692 232 aaPredicted RBP10.47□□□□□ -0.73
GGA3-202ENST00000538886 SPRYD3Q8NCJ5 442 aa10.47□□□□□ -0.73
GGA3-202ENST00000538886 HACL1Q9UJ83 578 aa10.47□□□□□ -0.73
GGA3-202ENST00000538886 IQCA1LA6NCM1 817 aa10.47□□□□□ -0.73
GGA3-202ENST00000538886 MCCP23508 829 aa10.47□□□□□ -0.73
GGA3-202ENST00000538886 GSTO1P78417 241 aa10.47□□□□□ -0.73
GGA3-202ENST00000538886 HDAC1Q13547 482 aaPredicted RBP10.47□□□□□ -0.73
GGA3-202ENST00000538886 ZYXQ15942 572 aaKnown RBP10.47□□□□□ -0.73
GGA3-202ENST00000538886 FEZ1Q99689 392 aa10.47□□□□□ -0.73
GGA3-202ENST00000538886 RANBP6O60518 1105 aaKnown RBP10.47□□□□□ -0.73
GGA3-202ENST00000538886 CIAO1O76071 339 aa10.47□□□□□ -0.73
GGA3-202ENST00000538886 GOLGA6L3A6NEY3 463 aa10.46□□□□□ -0.73
GGA3-202ENST00000538886 MCAMP43121 646 aa10.46□□□□□ -0.73
GGA3-202ENST00000538886 RALYLQ86SE5 291 aaKnown RBP10.46□□□□□ -0.73
GGA3-202ENST00000538886 SDR42E1Q8WUS8 393 aa10.46□□□□□ -0.73
GGA3-202ENST00000538886 PIBF1Q8WXW3 757 aa10.46□□□□□ -0.73
GGA3-202ENST00000538886 CRYBG1Q9Y4K1 1723 aa10.46□□□□□ -0.73
GGA3-202ENST00000538886 PRDM1O75626 825 aa10.46□□□□□ -0.73
GGA3-202ENST00000538886 BTDP43251 543 aa10.46□□□□□ -0.73
GGA3-202ENST00000538886 ZNF532Q9HCE3 1301 aa10.46□□□□□ -0.74
GGA3-202ENST00000538886 RGPD1P0DJD0 1748 aa10.46□□□□□ -0.74
GGA3-202ENST00000538886 SHTN1A0MZ66 631 aa10.46□□□□□ -0.74
GGA3-202ENST00000538886 NCLP19338 710 aaKnown RBP10.46□□□□□ -0.74
GGA3-202ENST00000538886 NUCB1Q02818 461 aa10.46□□□□□ -0.74
GGA3-202ENST00000538886 KIF4BQ2VIQ3 1234 aa10.46□□□□□ -0.74
GGA3-202ENST00000538886 ANGEL2Q5VTE6 544 aaKnown RBP10.46□□□□□ -0.74
GGA3-202ENST00000538886 ANP32BQ92688 251 aaKnown RBP10.46□□□□□ -0.74
GGA3-202ENST00000538886 SEC62Q99442 399 aaKnown RBP10.46□□□□□ -0.74
GGA3-202ENST00000538886 CRNKL1Q9BZJ0 848 aaKnown RBP10.46□□□□□ -0.74
GGA3-202ENST00000538886 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.46□□□□□ -0.74
GGA3-202ENST00000538886 C4BP0C0L5 1744 aa10.45□□□□□ -0.74
GGA3-202ENST00000538886 FAM196BA6NMK8 535 aa10.45□□□□□ -0.74
GGA3-202ENST00000538886 KCNA3P22001 575 aa10.45□□□□□ -0.74
GGA3-202ENST00000538886 TNNI2P48788 182 aa10.45□□□□□ -0.74
GGA3-202ENST00000538886 DYNLL1P63167 89 aaKnown RBP10.45□□□□□ -0.74
GGA3-202ENST00000538886 NFXL1Q6ZNB6 911 aa10.45□□□□□ -0.74
GGA3-202ENST00000538886 GGA3Q9NZ52 723 aa10.45□□□□□ -0.74
GGA3-202ENST00000538886 MYH14Q7Z406 1995 aaKnown RBP10.45□□□□□ -0.74
GGA3-202ENST00000538886 HLA-DOAP06340 250 aa10.45□□□□□ -0.74
GGA3-202ENST00000538886 EPHX2P34913 555 aa10.45□□□□□ -0.74
GGA3-202ENST00000538886 RFX5P48382 616 aaPredicted RBP10.45□□□□□ -0.74
GGA3-202ENST00000538886 USP48Q86UV5 1035 aa10.45□□□□□ -0.74
GGA3-202ENST00000538886 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.45□□□□□ -0.74
GGA3-202ENST00000538886 CHGBP05060 677 aa10.45□□□□□ -0.74
GGA3-202ENST00000538886 POLA2Q14181 598 aa10.45□□□□□ -0.74
GGA3-202ENST00000538886 RAB3GAP1Q15042 981 aa10.45□□□□□ -0.74
GGA3-202ENST00000538886 EVI5LQ96CN4 794 aa10.45□□□□□ -0.74
GGA3-202ENST00000538886 PDCL3Q9H2J4 239 aa10.45□□□□□ -0.74
GGA3-202ENST00000538886 CICQ96RK0 1608 aaPredicted RBP10.45□□□□□ -0.74
GGA3-202ENST00000538886 NBPF9Q3BBW0 867 aa10.44□□□□□ -0.74
GGA3-202ENST00000538886 ITGB4P16144 1822 aa10.44□□□□□ -0.74
GGA3-202ENST00000538886 ZKSCAN1P17029 563 aaPredicted RBP10.44□□□□□ -0.74
GGA3-202ENST00000538886 SDSP20132 328 aa10.44□□□□□ -0.74
GGA3-202ENST00000538886 CRKP46108 304 aa10.44□□□□□ -0.74
GGA3-202ENST00000538886 MECOMQ03112 1051 aa10.44□□□□□ -0.74
GGA3-202ENST00000538886 STX8Q9UNK0 236 aa10.44□□□□□ -0.74
GGA3-202ENST00000538886 RSBN1LQ6PCB5 846 aaPredicted RBP10.44□□□□□ -0.74
GGA3-202ENST00000538886 DLK2Q6UY11 383 aa10.44□□□□□ -0.74
GGA3-202ENST00000538886 FAM227BQ96M60 508 aa10.44□□□□□ -0.74
GGA3-202ENST00000538886 FBXO3Q9UK99 471 aa10.44□□□□□ -0.74
GGA3-202ENST00000538886 FZD1Q9UP38 647 aa10.44□□□□□ -0.74
GGA3-202ENST00000538886 SLC3A2P08195 630 aaKnown RBP10.43□□□□□ -0.74
GGA3-202ENST00000538886 PLEKHM2Q8IWE5 1019 aa10.43□□□□□ -0.74
GGA3-202ENST00000538886 ZNF444Q8N0Y2 327 aaPredicted RBP10.43□□□□□ -0.74
GGA3-202ENST00000538886 PALD1Q9ULE6 856 aa10.43□□□□□ -0.74
GGA3-202ENST00000538886 SCN11AQ9UI33 1791 aa10.43□□□□□ -0.74
GGA3-202ENST00000538886 GRIPAP1Q4V328 841 aa10.43□□□□□ -0.74
GGA3-202ENST00000538886 STRIP1Q5VSL9 837 aa10.43□□□□□ -0.74
GGA3-202ENST00000538886 PIH1D3Q9NQM4 214 aaKnown RBP10.43□□□□□ -0.74
GGA3-202ENST00000538886 PCDHAC2Q9Y5I4 1007 aa10.43□□□□□ -0.74
GGA3-202ENST00000538886 ZNF541Q9H0D2 1346 aa10.43□□□□□ -0.74
GGA3-202ENST00000538886 PPP1R12BO60237 982 aaPredicted RBP10.43□□□□□ -0.74
GGA3-202ENST00000538886 CDC45O75419 566 aa10.43□□□□□ -0.74
GGA3-202ENST00000538886 MTX1Q13505 466 aa10.43□□□□□ -0.74
GGA3-202ENST00000538886 SMC5Q8IY18 1101 aa10.43□□□□□ -0.74
GGA3-202ENST00000538886 BACH2Q9BYV9 841 aa10.43□□□□□ -0.74
GGA3-202ENST00000538886 CYP2E1P05181 493 aaPredicted RBP10.42□□□□□ -0.74
GGA3-202ENST00000538886 PDE6AP16499 860 aa10.42□□□□□ -0.74
GGA3-202ENST00000538886 NMIQ13287 307 aaPredicted RBP10.42□□□□□ -0.74
GGA3-202ENST00000538886 CSRNP1Q96S65 589 aa10.42□□□□□ -0.74
GGA3-202ENST00000538886 SGIP1Q9BQI5 828 aa10.42□□□□□ -0.74
GGA3-202ENST00000538886 BEGAINQ9BUH8 593 aa10.42□□□□□ -0.74
GGA3-202ENST00000538886 GLIS2Q9BZE0 524 aaPredicted RBP10.42□□□□□ -0.74
GGA3-202ENST00000538886 ANGEL1Q9UNK9 670 aaKnown RBP10.42□□□□□ -0.74
GGA3-202ENST00000538886 IBTKQ9P2D0 1353 aaPredicted RBP10.42□□□□□ -0.74
GGA3-202ENST00000538886 MAST3O60307 1309 aa10.42□□□□□ -0.74
GGA3-202ENST00000538886 ERICH2A1L162 156 aa10.42□□□□□ -0.74
GGA3-202ENST00000538886 PPFIA3O75145 1194 aa10.42□□□□□ -0.74
GGA3-202ENST00000538886 CCDC82Q8N4S0 544 aa10.42□□□□□ -0.74
GGA3-202ENST00000538886 MYOZ2Q9NPC6 264 aa10.42□□□□□ -0.74
GGA3-202ENST00000538886 PKD1L3Q7Z443 1732 aa10.42□□□□□ -0.74
GGA3-202ENST00000538886 RNF113AO15541 343 aaKnown RBP10.42□□□□□ -0.74
GGA3-202ENST00000538886 PSMD1Q99460 953 aa10.42□□□□□ -0.74
GGA3-202ENST00000538886 CABP5Q9NP86 173 aa10.42□□□□□ -0.74
GGA3-202ENST00000538886 FOXD4L1Q9NU39 408 aa10.42□□□□□ -0.74
GGA3-202ENST00000538886 PRKAB2O43741 272 aa10.41□□□□□ -0.74
GGA3-202ENST00000538886 TNFAIP1Q13829 316 aa10.41□□□□□ -0.74
GGA3-202ENST00000538886 RAB11FIP4Q86YS3 637 aa10.41□□□□□ -0.74
GGA3-202ENST00000538886 NUP133Q8WUM0 1156 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms