RNA–Protein interactions for RNA: ENST00000538418.1

CD9-207, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-207ENST00000538418 S100BP04271 92 aaPredicted RBP12.14□□□□□ -0.47
CD9-207ENST00000538418 SOX18P35713 384 aa12.14□□□□□ -0.47
CD9-207ENST00000538418 SFSWAPQ12872 951 aaKnown RBP12.14□□□□□ -0.47
CD9-207ENST00000538418 SEPT6Q14141 434 aa12.14□□□□□ -0.47
CD9-207ENST00000538418 RPS26P11Q5JNZ5 115 aaPredicted RBP12.14□□□□□ -0.47
CD9-207ENST00000538418 BHLHE41Q9C0J9 482 aaPredicted RBP12.14□□□□□ -0.47
CD9-207ENST00000538418 SLC52A1Q9NWF4 448 aa12.14□□□□□ -0.47
CD9-207ENST00000538418 GPN3Q9UHW5 284 aaPredicted RBP12.14□□□□□ -0.47
CD9-207ENST00000538418 PCDHB5Q9Y5E4 795 aa12.14□□□□□ -0.47
CD9-207ENST00000538418 A0A096LPE4 126 aa12.13□□□□□ -0.47
CD9-207ENST00000538418 A0A1W2PPZ6 126 aa12.13□□□□□ -0.47
CD9-207ENST00000538418 FAAP100Q0VG06 881 aa12.13□□□□□ -0.47
CD9-207ENST00000538418 MTERF2Q49AM1 385 aa12.13□□□□□ -0.47
CD9-207ENST00000538418 LARP1BQ659C4 914 aaKnown RBP12.13□□□□□ -0.47
CD9-207ENST00000538418 REXO1Q8N1G1 1221 aaKnown RBP12.13□□□□□ -0.47
CD9-207ENST00000538418 CEP120Q8N960 986 aa12.13□□□□□ -0.47
CD9-207ENST00000538418 THAP3Q8WTV1 239 aaPredicted RBP12.13□□□□□ -0.47
CD9-207ENST00000538418 JARID2Q92833 1246 aaPredicted RBP12.13□□□□□ -0.47
CD9-207ENST00000538418 TNKS2Q9H2K2 1166 aa12.13□□□□□ -0.47
CD9-207ENST00000538418 ZNF576Q9H609 170 aa12.13□□□□□ -0.47
CD9-207ENST00000538418 TOR4AQ9NXH8 423 aa12.13□□□□□ -0.47
CD9-207ENST00000538418 TLR7Q9NYK1 1049 aaKnown RBP12.13□□□□□ -0.47
CD9-207ENST00000538418 ZNRF3Q9ULT6 936 aa12.13□□□□□ -0.47
CD9-207ENST00000538418 PDGFRBP09619 1106 aa12.12□□□□□ -0.47
CD9-207ENST00000538418 IMPDH2P12268 514 aa12.12□□□□□ -0.47
CD9-207ENST00000538418 HPS1Q92902 700 aa12.12□□□□□ -0.47
CD9-207ENST00000538418 BRMS1Q9HCU9 246 aa12.12□□□□□ -0.47
CD9-207ENST00000538418 TYW1Q9NV66 732 aaKnown RBP12.12□□□□□ -0.47
CD9-207ENST00000538418 G3BP2Q9UN86 482 aaKnown RBP12.12□□□□□ -0.47
CD9-207ENST00000538418 FAN1Q9Y2M0 1017 aa12.12□□□□□ -0.47
CD9-207ENST00000538418 RAD54L2Q9Y4B4 1467 aa12.11□□□□□ -0.47
CD9-207ENST00000538418 CAPN5O15484 640 aaPredicted RBP12.11□□□□□ -0.47
CD9-207ENST00000538418 GDF9O60383 454 aa12.11□□□□□ -0.47
CD9-207ENST00000538418 F11P03951 625 aa12.11□□□□□ -0.47
CD9-207ENST00000538418 TKFCQ3LXA3 575 aa12.11□□□□□ -0.47
CD9-207ENST00000538418 GK5Q6ZS86 529 aa12.11□□□□□ -0.47
CD9-207ENST00000538418 JMYQ8N9B5 988 aa12.11□□□□□ -0.47
CD9-207ENST00000538418 TMEM102Q8N9M5 508 aaPredicted RBP12.11□□□□□ -0.47
CD9-207ENST00000538418 RBBP8NLQ8NC74 664 aaPredicted RBP12.11□□□□□ -0.47
CD9-207ENST00000538418 PNMA5Q96PV4 448 aa12.11□□□□□ -0.47
CD9-207ENST00000538418 MAGI1Q96QZ7 1491 aaPredicted RBP12.1□□□□□ -0.47
CD9-207ENST00000538418 NFKBIEO00221 500 aa12.1□□□□□ -0.47
CD9-207ENST00000538418 HOXD8P13378 290 aaPredicted RBP12.1□□□□□ -0.47
CD9-207ENST00000538418 CASP7P55210 303 aa12.1□□□□□ -0.47
CD9-207ENST00000538418 PLAURQ03405 335 aa12.1□□□□□ -0.47
CD9-207ENST00000538418 C6orf118Q5T5N4 469 aa12.1□□□□□ -0.47
CD9-207ENST00000538418 POTEGQ6S5H5 508 aa12.1□□□□□ -0.47
CD9-207ENST00000538418 REC114Q7Z4M0 266 aa12.1□□□□□ -0.47
CD9-207ENST00000538418 LSRQ86X29 649 aaPredicted RBP12.1□□□□□ -0.47
CD9-207ENST00000538418 DHX37Q8IY37 1157 aaKnown RBP12.1□□□□□ -0.47
CD9-207ENST00000538418 NXPE3Q969Y0 559 aa12.1□□□□□ -0.47
CD9-207ENST00000538418 HHIPQ96QV1 700 aa12.1□□□□□ -0.47
CD9-207ENST00000538418 TMEM39AQ9NV64 488 aa12.1□□□□□ -0.47
CD9-207ENST00000538418 SAMM50Q9Y512 469 aa12.1□□□□□ -0.47
CD9-207ENST00000538418 GRIN2BQ13224 1484 aa12.09□□□□□ -0.47
CD9-207ENST00000538418 CILPO75339 1184 aa12.09□□□□□ -0.47
CD9-207ENST00000538418 GJB6O95452 261 aa12.09□□□□□ -0.47
CD9-207ENST00000538418 FAM157BP0CG42 384 aa12.09□□□□□ -0.47
CD9-207ENST00000538418 HCLS1P14317 486 aaPredicted RBP12.09□□□□□ -0.47
CD9-207ENST00000538418 NFKB1P19838 968 aa12.09□□□□□ -0.47
CD9-207ENST00000538418 CLCQ05315 142 aa12.09□□□□□ -0.47
CD9-207ENST00000538418 TCEA2Q15560 299 aa12.09□□□□□ -0.47
CD9-207ENST00000538418 EFHC2Q5JST6 749 aa12.09□□□□□ -0.47
CD9-207ENST00000538418 DIEXFQ68CQ4 756 aaKnown RBP12.09□□□□□ -0.47
CD9-207ENST00000538418 KANK3Q6NY19 840 aa12.09□□□□□ -0.47
CD9-207ENST00000538418 DYRK1BQ9Y463 629 aa12.09□□□□□ -0.47
CD9-207ENST00000538418 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.09□□□□□ -0.47
CD9-207ENST00000538418 KDM2BQ8NHM5 1336 aa12.09□□□□□ -0.47
CD9-207ENST00000538418 EFSO43281 561 aa12.08□□□□□ -0.48
CD9-207ENST00000538418 VIL1P09327 827 aaKnown RBP12.08□□□□□ -0.48
CD9-207ENST00000538418 ASAP3Q8TDY4 903 aa12.08□□□□□ -0.48
CD9-207ENST00000538418 FGD5Q6ZNL6 1462 aa12.08□□□□□ -0.48
CD9-207ENST00000538418 TTLL8A6PVC2 850 aa12.07□□□□□ -0.48
CD9-207ENST00000538418 ATXN7O15265 892 aaPredicted RBP12.07□□□□□ -0.48
CD9-207ENST00000538418 PPP2R3AQ06190 1150 aa12.07□□□□□ -0.48
CD9-207ENST00000538418 PPP2R5EQ16537 467 aa12.07□□□□□ -0.48
CD9-207ENST00000538418 RASIP1Q5U651 963 aa12.07□□□□□ -0.48
CD9-207ENST00000538418 EFCC1Q9HA90 598 aa12.07□□□□□ -0.48
CD9-207ENST00000538418 PFDN2Q9UHV9 154 aa12.07□□□□□ -0.48
CD9-207ENST00000538418 CYP8B1Q9UNU6 501 aa12.07□□□□□ -0.48
CD9-207ENST00000538418 PTCH2Q9Y6C5 1203 aa12.07□□□□□ -0.48
CD9-207ENST00000538418 PLEKHD1A6NEE1 506 aa12.06□□□□□ -0.48
CD9-207ENST00000538418 KHNYNO15037 678 aaKnown RBP12.06□□□□□ -0.48
CD9-207ENST00000538418 DDAH1O94760 285 aa12.06□□□□□ -0.48
CD9-207ENST00000538418 MAP3K6O95382 1288 aa12.06□□□□□ -0.48
CD9-207ENST00000538418 BPNT1O95861 308 aa12.06□□□□□ -0.48
CD9-207ENST00000538418 BMP6P22004 513 aa12.06□□□□□ -0.48
CD9-207ENST00000538418 ZNF157P51786 506 aaPredicted RBP12.06□□□□□ -0.48
CD9-207ENST00000538418 FIGNL1Q6PIW4 674 aa12.06□□□□□ -0.48
CD9-207ENST00000538418 SYNPOQ8N3V7 929 aa12.06□□□□□ -0.48
CD9-207ENST00000538418 NSUN5Q96P11 429 aaKnown RBP12.06□□□□□ -0.48
CD9-207ENST00000538418 ARAP1Q96P48 1450 aa12.06□□□□□ -0.48
CD9-207ENST00000538418 TNFRSF10AO00220 468 aa12.05□□□□□ -0.48
CD9-207ENST00000538418 DIAPH1O60610 1272 aaKnown RBP12.05□□□□□ -0.48
CD9-207ENST00000538418 ASMTLO95671 621 aa12.05□□□□□ -0.48
CD9-207ENST00000538418 DALRD3Q5D0E6 543 aaKnown RBP12.05□□□□□ -0.48
CD9-207ENST00000538418 SPATC1Q76KD6 591 aa12.05□□□□□ -0.48
CD9-207ENST00000538418 GAS2L1Q99501 681 aaPredicted RBP12.05□□□□□ -0.48
CD9-207ENST00000538418 RIPOR2Q9Y4F9 1068 aa12.05□□□□□ -0.48
CD9-207ENST00000538418 SYNJ2O15056 1496 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms