RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 PARP3Q9Y6F1 533 aa13.13□□□□□ -0.31
SEMA4D-221ENST00000537934 BCL9O00512 1426 aa13.13□□□□□ -0.31
SEMA4D-221ENST00000537934 PXDNLA1KZ92 1463 aa13.13□□□□□ -0.31
SEMA4D-221ENST00000537934 E2F4Q16254 413 aa13.13□□□□□ -0.31
SEMA4D-221ENST00000537934 BEND3Q5T5X7 828 aa13.13□□□□□ -0.31
SEMA4D-221ENST00000537934 EFCAB13Q8IY85 973 aa13.13□□□□□ -0.31
SEMA4D-221ENST00000537934 XAGE3Q8WTP9 111 aa13.13□□□□□ -0.31
SEMA4D-221ENST00000537934 ZSWIM6Q9HCJ5 1215 aa13.13□□□□□ -0.31
SEMA4D-221ENST00000537934 ANO10Q9NW15 660 aa13.13□□□□□ -0.31
SEMA4D-221ENST00000537934 LAMB4A4D0S4 1761 aa13.13□□□□□ -0.31
SEMA4D-221ENST00000537934 N4BP2Q86UW6 1770 aaPredicted RBP13.13□□□□□ -0.31
SEMA4D-221ENST00000537934 A1BGP04217 495 aa13.12□□□□□ -0.31
SEMA4D-221ENST00000537934 FOXR1Q6PIV2 292 aa13.12□□□□□ -0.31
SEMA4D-221ENST00000537934 COPS6Q7L5N1 327 aa13.12□□□□□ -0.31
SEMA4D-221ENST00000537934 PARD6BQ9BYG5 372 aa13.12□□□□□ -0.31
SEMA4D-221ENST00000537934 USP44Q9H0E7 712 aa13.12□□□□□ -0.31
SEMA4D-221ENST00000537934 EPC1Q9H2F5 836 aa13.12□□□□□ -0.31
SEMA4D-221ENST00000537934 MED4Q9NPJ6 270 aa13.12□□□□□ -0.31
SEMA4D-221ENST00000537934 CYP46A1Q9Y6A2 500 aa13.12□□□□□ -0.31
SEMA4D-221ENST00000537934 NBPF26B4DH59 902 aa13.12□□□□□ -0.31
SEMA4D-221ENST00000537934 LONRF2Q1L5Z9 754 aa13.12□□□□□ -0.31
SEMA4D-221ENST00000537934 NBPF14Q5TI25 921 aa13.12□□□□□ -0.31
SEMA4D-221ENST00000537934 NBPF10Q6P3W6 841 aaKnown RBP13.12□□□□□ -0.31
SEMA4D-221ENST00000537934 KSR2Q6VAB6 950 aa13.12□□□□□ -0.31
SEMA4D-221ENST00000537934 RSRC2Q7L4I2 434 aaKnown RBP13.12□□□□□ -0.31
SEMA4D-221ENST00000537934 NBPF15Q8N660 670 aa13.12□□□□□ -0.31
SEMA4D-221ENST00000537934 RABGGTAQ92696 567 aa13.12□□□□□ -0.31
SEMA4D-221ENST00000537934 MSL3Q8N5Y2 521 aaKnown RBP13.12□□□□□ -0.31
SEMA4D-221ENST00000537934 NECAB1Q8N987 351 aa13.12□□□□□ -0.31
SEMA4D-221ENST00000537934 VPS18Q9P253 973 aa13.12□□□□□ -0.31
SEMA4D-221ENST00000537934 AFF2P51816 1311 aa13.11□□□□□ -0.31
SEMA4D-221ENST00000537934 CCDC151A5D8V7 595 aa13.11□□□□□ -0.31
SEMA4D-221ENST00000537934 ZRSR1Q15695 479 aaKnown RBP13.11□□□□□ -0.31
SEMA4D-221ENST00000537934 CWF19L2Q2TBE0 894 aaKnown RBP13.11□□□□□ -0.31
SEMA4D-221ENST00000537934 JAKMIP1Q96N16 626 aaKnown RBP13.11□□□□□ -0.31
SEMA4D-221ENST00000537934 FANCGO15287 622 aa13.11□□□□□ -0.31
SEMA4D-221ENST00000537934 ATP6V1AP38606 617 aa13.11□□□□□ -0.31
SEMA4D-221ENST00000537934 APOBRQ0VD83 1088 aa13.11□□□□□ -0.31
SEMA4D-221ENST00000537934 BRD3Q15059 726 aa13.11□□□□□ -0.31
SEMA4D-221ENST00000537934 CEP57L1Q8IYX8 460 aa13.11□□□□□ -0.31
SEMA4D-221ENST00000537934 NAT10Q9H0A0 1025 aaKnown RBP13.11□□□□□ -0.31
SEMA4D-221ENST00000537934 SUFUQ9UMX1 484 aa13.11□□□□□ -0.31
SEMA4D-221ENST00000537934 NBPF7P0C2Y1 421 aaPredicted RBP13.1□□□□□ -0.31
SEMA4D-221ENST00000537934 MAP2K2P36507 400 aa13.1□□□□□ -0.31
SEMA4D-221ENST00000537934 TMC6Q7Z403 805 aa13.1□□□□□ -0.31
SEMA4D-221ENST00000537934 DNAJC10Q8IXB1 793 aa13.1□□□□□ -0.31
SEMA4D-221ENST00000537934 AOPEPQ8N6M6 819 aa13.1□□□□□ -0.31
SEMA4D-221ENST00000537934 KCNB2Q92953 911 aa13.1□□□□□ -0.31
SEMA4D-221ENST00000537934 SLC4A9Q96Q91 983 aa13.1□□□□□ -0.31
SEMA4D-221ENST00000537934 MPHOSPH8Q99549 860 aa13.1□□□□□ -0.31
SEMA4D-221ENST00000537934 CCDC196A0A1B0GTZ2 297 aa13.1□□□□□ -0.31
SEMA4D-221ENST00000537934 SRGAP3O43295 1099 aa13.1□□□□□ -0.31
SEMA4D-221ENST00000537934 MAP3K9P80192 1104 aa13.1□□□□□ -0.31
SEMA4D-221ENST00000537934 ATP8B2P98198 1209 aa13.1□□□□□ -0.31
SEMA4D-221ENST00000537934 GNL2Q13823 731 aaKnown RBP13.1□□□□□ -0.31
SEMA4D-221ENST00000537934 RIC3Q7Z5B4 369 aa13.1□□□□□ -0.31
SEMA4D-221ENST00000537934 RPAINQ86UA6 219 aa13.1□□□□□ -0.31
SEMA4D-221ENST00000537934 ANKRD20A12PQ8NF67 263 aa13.1□□□□□ -0.31
SEMA4D-221ENST00000537934 TPCN1Q9ULQ1 816 aa13.1□□□□□ -0.31
SEMA4D-221ENST00000537934 A0A087WUV0 522 aaPredicted RBP13.09□□□□□ -0.31
SEMA4D-221ENST00000537934 DDX58O95786 925 aaKnown RBP13.09□□□□□ -0.31
SEMA4D-221ENST00000537934 SATB1Q01826 763 aa13.09□□□□□ -0.31
SEMA4D-221ENST00000537934 ADCK5Q3MIX3 580 aa13.09□□□□□ -0.31
SEMA4D-221ENST00000537934 TADA2BQ86TJ2 420 aa13.09□□□□□ -0.31
SEMA4D-221ENST00000537934 KCNQ2O43526 872 aa13.09□□□□□ -0.31
SEMA4D-221ENST00000537934 UBTFL1P0CB47 393 aaPredicted RBP13.09□□□□□ -0.31
SEMA4D-221ENST00000537934 LRRC31Q6UY01 552 aa13.09□□□□□ -0.31
SEMA4D-221ENST00000537934 CEP120Q8N960 986 aa13.09□□□□□ -0.31
SEMA4D-221ENST00000537934 HNRNPLLQ8WVV9 542 aaKnown RBP13.09□□□□□ -0.31
SEMA4D-221ENST00000537934 PDE11AQ9HCR9 933 aa13.09□□□□□ -0.31
SEMA4D-221ENST00000537934 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.08□□□□□ -0.32
SEMA4D-221ENST00000537934 TXLNAP40222 546 aa13.08□□□□□ -0.32
SEMA4D-221ENST00000537934 PPP2R3AQ06190 1150 aa13.08□□□□□ -0.32
SEMA4D-221ENST00000537934 FAM182BQ5T319 152 aa13.08□□□□□ -0.32
SEMA4D-221ENST00000537934 XPO4Q9C0E2 1151 aaKnown RBP13.08□□□□□ -0.32
SEMA4D-221ENST00000537934 PNMA6EA0A0J9YXQ4 647 aa13.08□□□□□ -0.32
SEMA4D-221ENST00000537934 ANKRD13DQ6ZTN6 518 aa13.08□□□□□ -0.32
SEMA4D-221ENST00000537934 CNTROBQ8N137 903 aa13.08□□□□□ -0.32
SEMA4D-221ENST00000537934 GOLGA1Q92805 767 aa13.08□□□□□ -0.32
SEMA4D-221ENST00000537934 CFAP45Q9UL16 551 aa13.08□□□□□ -0.32
SEMA4D-221ENST00000537934 MRFAP1Q9Y605 127 aa13.08□□□□□ -0.32
SEMA4D-221ENST00000537934 EIF3JO75822 258 aaKnown RBP13.07□□□□□ -0.32
SEMA4D-221ENST00000537934 IGKV5-2P06315 115 aa13.07□□□□□ -0.32
SEMA4D-221ENST00000537934 IFIT2P09913 472 aaKnown RBP13.07□□□□□ -0.32
SEMA4D-221ENST00000537934 TTLL7Q6ZT98 887 aa13.07□□□□□ -0.32
SEMA4D-221ENST00000537934 HDXQ7Z353 690 aa13.07□□□□□ -0.32
SEMA4D-221ENST00000537934 PI4K2BQ8TCG2 481 aa13.07□□□□□ -0.32
SEMA4D-221ENST00000537934 ZNF330Q9Y3S2 320 aaPredicted RBP13.07□□□□□ -0.32
SEMA4D-221ENST00000537934 MAP4K4O95819 1239 aaPredicted RBP13.07□□□□□ -0.32
SEMA4D-221ENST00000537934 CWC27Q6UX04 472 aaKnown RBP13.07□□□□□ -0.32
SEMA4D-221ENST00000537934 FCHSD1Q86WN1 690 aa13.07□□□□□ -0.32
SEMA4D-221ENST00000537934 GJD4Q96KN9 370 aaPredicted RBP13.07□□□□□ -0.32
SEMA4D-221ENST00000537934 FAM107BQ9H098 131 aa13.07□□□□□ -0.32
SEMA4D-221ENST00000537934 IFNKQ9P0W0 207 aa13.07□□□□□ -0.32
SEMA4D-221ENST00000537934 ZSCAN12O43309 604 aa13.06□□□□□ -0.32
SEMA4D-221ENST00000537934 PPFIA4O75335 1185 aa13.06□□□□□ -0.32
SEMA4D-221ENST00000537934 PRPF40BQ6NWY9 871 aaKnown RBP13.06□□□□□ -0.32
SEMA4D-221ENST00000537934 PTF1AQ7RTS3 328 aa13.06□□□□□ -0.32
SEMA4D-221ENST00000537934 MYD88Q99836 296 aa13.06□□□□□ -0.32
SEMA4D-221ENST00000537934 AKAP2Q9Y2D5 859 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms