RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 CCDC148Q8NFR7 591 aa9.7□□□□□ -0.86
SRGAP1-202ENST00000537556 COG1Q8WTW3 980 aa9.7□□□□□ -0.86
SRGAP1-202ENST00000537556 OSBPL9Q96SU4 736 aa9.7□□□□□ -0.86
SRGAP1-202ENST00000537556 ACTR5Q9H9F9 607 aaPredicted RBP9.7□□□□□ -0.86
SRGAP1-202ENST00000537556 SLC40A1Q9NP59 571 aa9.7□□□□□ -0.86
SRGAP1-202ENST00000537556 KIAA0232Q92628 1395 aa9.7□□□□□ -0.86
SRGAP1-202ENST00000537556 NRXN1Q9ULB1 1477 aa9.69□□□□□ -0.86
SRGAP1-202ENST00000537556 UBASH3AP57075 661 aa9.69□□□□□ -0.86
SRGAP1-202ENST00000537556 SNX1Q13596 522 aa9.69□□□□□ -0.86
SRGAP1-202ENST00000537556 WHAMMP3Q1A5X7 153 aa9.69□□□□□ -0.86
SRGAP1-202ENST00000537556 TTLL7Q6ZT98 887 aa9.69□□□□□ -0.86
SRGAP1-202ENST00000537556 RASEFQ8IZ41 740 aa9.69□□□□□ -0.86
SRGAP1-202ENST00000537556 TSPYL6Q8N831 410 aa9.69□□□□□ -0.86
SRGAP1-202ENST00000537556 SDF4Q9BRK5 362 aa9.69□□□□□ -0.86
SRGAP1-202ENST00000537556 GGA2Q9UJY4 613 aa9.69□□□□□ -0.86
SRGAP1-202ENST00000537556 UNC13BO14795 1591 aa9.69□□□□□ -0.86
SRGAP1-202ENST00000537556 ENO4A6NNW6 628 aa9.69□□□□□ -0.86
SRGAP1-202ENST00000537556 ELL2O00472 640 aaPredicted RBP9.69□□□□□ -0.86
SRGAP1-202ENST00000537556 AHCYL1O43865 530 aa9.69□□□□□ -0.86
SRGAP1-202ENST00000537556 ZNF202O95125 648 aa9.69□□□□□ -0.86
SRGAP1-202ENST00000537556 PDIA5Q14554 519 aa9.69□□□□□ -0.86
SRGAP1-202ENST00000537556 SETDB1Q15047 1291 aa9.69□□□□□ -0.86
SRGAP1-202ENST00000537556 CCDC13Q8IYE1 715 aa9.69□□□□□ -0.86
SRGAP1-202ENST00000537556 SMARCC2Q8TAQ2 1214 aa9.69□□□□□ -0.86
SRGAP1-202ENST00000537556 ZSWIM6Q9HCJ5 1215 aa9.69□□□□□ -0.86
SRGAP1-202ENST00000537556 IKBKBO14920 756 aa9.69□□□□□ -0.86
SRGAP1-202ENST00000537556 SERPINC1P01008 464 aa9.69□□□□□ -0.86
SRGAP1-202ENST00000537556 FESP07332 822 aa9.69□□□□□ -0.86
SRGAP1-202ENST00000537556 RPSAP08865 295 aaKnown RBP9.69□□□□□ -0.86
SRGAP1-202ENST00000537556 NBPF7P0C2Y1 421 aaPredicted RBP9.69□□□□□ -0.86
SRGAP1-202ENST00000537556 IMPDH2P12268 514 aa9.69□□□□□ -0.86
SRGAP1-202ENST00000537556 ABCD1P33897 745 aa9.69□□□□□ -0.86
SRGAP1-202ENST00000537556 RNF187Q5TA31 235 aaPredicted RBP9.69□□□□□ -0.86
SRGAP1-202ENST00000537556 TSHZ3Q63HK5 1081 aa9.69□□□□□ -0.86
SRGAP1-202ENST00000537556 CCDC114Q96M63 670 aa9.69□□□□□ -0.86
SRGAP1-202ENST00000537556 SCLT1Q96NL6 688 aa9.69□□□□□ -0.86
SRGAP1-202ENST00000537556 RAPGEF6Q8TEU7 1601 aa9.68□□□□□ -0.86
SRGAP1-202ENST00000537556 GRIN2DO15399 1336 aa9.68□□□□□ -0.86
SRGAP1-202ENST00000537556 CTAGE9A4FU28 777 aa9.68□□□□□ -0.86
SRGAP1-202ENST00000537556 GOLGA8KD6RF30 607 aa9.68□□□□□ -0.86
SRGAP1-202ENST00000537556 MYO1BO43795 1136 aa9.68□□□□□ -0.86
SRGAP1-202ENST00000537556 ZEB2O60315 1214 aa9.68□□□□□ -0.86
SRGAP1-202ENST00000537556 CCDC175P0C221 793 aa9.68□□□□□ -0.86
SRGAP1-202ENST00000537556 GGCXP38435 758 aa9.68□□□□□ -0.86
SRGAP1-202ENST00000537556 ANKRD1Q15327 319 aa9.68□□□□□ -0.86
SRGAP1-202ENST00000537556 CCDC96Q2M329 555 aa9.68□□□□□ -0.86
SRGAP1-202ENST00000537556 CFAP100Q494V2 611 aa9.68□□□□□ -0.86
SRGAP1-202ENST00000537556 CYB5D1Q6P9G0 228 aa9.68□□□□□ -0.86
SRGAP1-202ENST00000537556 SLC30A9Q6PML9 568 aa9.68□□□□□ -0.86
SRGAP1-202ENST00000537556 NECAB1Q8N987 351 aa9.68□□□□□ -0.86
SRGAP1-202ENST00000537556 NUP133Q8WUM0 1156 aa9.68□□□□□ -0.86
SRGAP1-202ENST00000537556 CCDC47Q96A33 483 aaKnown RBP9.68□□□□□ -0.86
SRGAP1-202ENST00000537556 JAKMIP1Q96N16 626 aaKnown RBP9.68□□□□□ -0.86
SRGAP1-202ENST00000537556 FMNL2Q96PY5 1086 aa9.68□□□□□ -0.86
SRGAP1-202ENST00000537556 LSG1Q9H089 658 aaKnown RBP9.68□□□□□ -0.86
SRGAP1-202ENST00000537556 SLC12A5Q9H2X9 1139 aa9.68□□□□□ -0.86
SRGAP1-202ENST00000537556 TPCN1Q9ULQ1 816 aa9.68□□□□□ -0.86
SRGAP1-202ENST00000537556 TBC1D2BQ9UPU7 963 aa9.68□□□□□ -0.86
SRGAP1-202ENST00000537556 ADCY9O60503 1353 aa9.68□□□□□ -0.86
SRGAP1-202ENST00000537556 KIAA1210Q9ULL0 1709 aa9.68□□□□□ -0.86
SRGAP1-202ENST00000537556 HECW2Q9P2P5 1572 aa9.68□□□□□ -0.86
SRGAP1-202ENST00000537556 PRPF40BQ6NWY9 871 aaKnown RBP9.68□□□□□ -0.86
SRGAP1-202ENST00000537556 LARP1Q6PKG0 1096 aaKnown RBP9.68□□□□□ -0.86
SRGAP1-202ENST00000537556 VSTM4Q8IW00 320 aa9.68□□□□□ -0.86
SRGAP1-202ENST00000537556 MFN1Q8IWA4 741 aa9.68□□□□□ -0.86
SRGAP1-202ENST00000537556 KIRREL3Q8IZU9 778 aa9.68□□□□□ -0.86
SRGAP1-202ENST00000537556 PIK3R5Q8WYR1 880 aa9.68□□□□□ -0.86
SRGAP1-202ENST00000537556 SH3GL2Q99962 352 aa9.68□□□□□ -0.86
SRGAP1-202ENST00000537556 PRDM16Q9HAZ2 1276 aa9.68□□□□□ -0.86
SRGAP1-202ENST00000537556 IQGAP3Q86VI3 1631 aa9.67□□□□□ -0.86
SRGAP1-202ENST00000537556 ZKSCAN1P17029 563 aaPredicted RBP9.67□□□□□ -0.86
SRGAP1-202ENST00000537556 ATP5JP18859 108 aa9.67□□□□□ -0.86
SRGAP1-202ENST00000537556 LAMB3Q13751 1172 aa9.67□□□□□ -0.86
SRGAP1-202ENST00000537556 E2F5Q15329 346 aa9.67□□□□□ -0.86
SRGAP1-202ENST00000537556 TMEM139Q8IV31 216 aa9.67□□□□□ -0.86
SRGAP1-202ENST00000537556 FBXW7Q969H0 707 aa9.67□□□□□ -0.86
SRGAP1-202ENST00000537556 SPAG5Q96R06 1193 aa9.67□□□□□ -0.86
SRGAP1-202ENST00000537556 KIAA1468Q9P260 1216 aa9.67□□□□□ -0.86
SRGAP1-202ENST00000537556 RCOR1Q9UKL0 485 aa9.67□□□□□ -0.86
SRGAP1-202ENST00000537556 ABCA8O94911 1581 aa9.67□□□□□ -0.86
SRGAP1-202ENST00000537556 ABCA6Q8N139 1617 aa9.67□□□□□ -0.86
SRGAP1-202ENST00000537556 ERICH2A1L162 156 aa9.67□□□□□ -0.86
SRGAP1-202ENST00000537556 GOLGA6BA6NDN3 693 aa9.67□□□□□ -0.86
SRGAP1-202ENST00000537556 PFKFB2O60825 505 aa9.67□□□□□ -0.86
SRGAP1-202ENST00000537556 FCHSD2O94868 740 aa9.67□□□□□ -0.86
SRGAP1-202ENST00000537556 CPA1P15085 419 aa9.67□□□□□ -0.86
SRGAP1-202ENST00000537556 ST3GAL1Q11201 340 aa9.67□□□□□ -0.86
SRGAP1-202ENST00000537556 CCDC181Q5TID7 509 aa9.67□□□□□ -0.86
SRGAP1-202ENST00000537556 HHATQ5VTY9 493 aa9.67□□□□□ -0.86
SRGAP1-202ENST00000537556 ATL3Q6DD88 541 aa9.67□□□□□ -0.86
SRGAP1-202ENST00000537556 ENGASEQ8NFI3 743 aa9.67□□□□□ -0.86
SRGAP1-202ENST00000537556 SPHKAPQ2M3C7 1700 aa9.67□□□□□ -0.86
SRGAP1-202ENST00000537556 H3BQV1 296 aa9.66□□□□□ -0.86
SRGAP1-202ENST00000537556 PPP1R12BO60237 982 aaPredicted RBP9.66□□□□□ -0.86
SRGAP1-202ENST00000537556 OPA1O60313 960 aa9.66□□□□□ -0.86
SRGAP1-202ENST00000537556 LMOD1P29536 600 aaPredicted RBP9.66□□□□□ -0.86
SRGAP1-202ENST00000537556 SKOR1P84550 965 aa9.66□□□□□ -0.86
SRGAP1-202ENST00000537556 IFFO2Q5TF58 517 aa9.66□□□□□ -0.86
SRGAP1-202ENST00000537556 FUKQ8N0W3 1084 aa9.66□□□□□ -0.86
SRGAP1-202ENST00000537556 EZH1Q92800 747 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 712.9 ms