RNA–Protein interactions for RNA: ENST00000537062.1

NPIPA1-205, Transcript of nuclear pore complex interacting protein family member A1, human

TSL 2

Gene NPIPA1, Length 568 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPA1-205	ENST00000537062	DACH1	Q9UI36	760 aa		10.86	□□□□□ -0.67
NPIPA1-205	ENST00000537062	NUP188	Q5SRE5	1749 aa		10.85	□□□□□ -0.67
NPIPA1-205	ENST00000537062	KLF18	A0A0U1RQI7	1052 aa		10.85	□□□□□ -0.67
NPIPA1-205	ENST00000537062	FDPS	P14324	419 aa	Known RBP	10.85	□□□□□ -0.67
NPIPA1-205	ENST00000537062	NDUFA8	P51970	172 aa		10.85	□□□□□ -0.67
NPIPA1-205	ENST00000537062	TIMM10	P62072	90 aa		10.85	□□□□□ -0.67
NPIPA1-205	ENST00000537062	TUBB4B	P68371	445 aa		10.85	□□□□□ -0.67
NPIPA1-205	ENST00000537062	TRIM28	Q13263	835 aa	Known RBP	10.85	□□□□□ -0.67
NPIPA1-205	ENST00000537062	TRIM29	Q14134	588 aa		10.85	□□□□□ -0.67
NPIPA1-205	ENST00000537062	TTF1	Q15361	905 aa	Predicted RBP	10.85	□□□□□ -0.67
NPIPA1-205	ENST00000537062	CCDC57	Q2TAC2	916 aa		10.85	□□□□□ -0.67
NPIPA1-205	ENST00000537062	CT47A1	Q5JQC4	288 aa	Predicted RBP	10.85	□□□□□ -0.67
NPIPA1-205	ENST00000537062	TMC6	Q7Z403	805 aa		10.85	□□□□□ -0.67
NPIPA1-205	ENST00000537062	WASF1	Q92558	559 aa		10.85	□□□□□ -0.67
NPIPA1-205	ENST00000537062	ZNF512B	Q96KM6	892 aa	Predicted RBP	10.85	□□□□□ -0.67
NPIPA1-205	ENST00000537062	XPO4	Q9C0E2	1151 aa	Known RBP	10.85	□□□□□ -0.67
NPIPA1-205	ENST00000537062	C19orf44	Q9H6X5	657 aa		10.85	□□□□□ -0.67
NPIPA1-205	ENST00000537062	IFNK	Q9P0W0	207 aa		10.85	□□□□□ -0.67
NPIPA1-205	ENST00000537062	TUBE1	Q9UJT0	475 aa		10.85	□□□□□ -0.67
NPIPA1-205	ENST00000537062	ZNF215	Q9UL58	517 aa	Predicted RBP	10.85	□□□□□ -0.67
NPIPA1-205	ENST00000537062	COL18A1	P39060	1754 aa		10.85	□□□□□ -0.67
NPIPA1-205	ENST00000537062		A0A1B0GVL5	298 aa		10.84	□□□□□ -0.67
NPIPA1-205	ENST00000537062	CUTA	O60888	179 aa		10.84	□□□□□ -0.67
NPIPA1-205	ENST00000537062	SYK	P43405	635 aa		10.84	□□□□□ -0.67
NPIPA1-205	ENST00000537062	ETF1	P62495	437 aa	Known RBP	10.84	□□□□□ -0.67
NPIPA1-205	ENST00000537062	FANCC	Q00597	558 aa		10.84	□□□□□ -0.67
NPIPA1-205	ENST00000537062	WASHC4	Q2M389	1173 aa		10.84	□□□□□ -0.67
NPIPA1-205	ENST00000537062	ILDR1	Q86SU0	546 aa	Predicted RBP	10.84	□□□□□ -0.67
NPIPA1-205	ENST00000537062	PROSER2	Q86WR7	435 aa	Predicted RBP	10.84	□□□□□ -0.67
NPIPA1-205	ENST00000537062	MB21D2	Q8IYB1	491 aa	Predicted RBP	10.84	□□□□□ -0.67
NPIPA1-205	ENST00000537062	CCDC34	Q96HJ3	373 aa		10.84	□□□□□ -0.67
NPIPA1-205	ENST00000537062	TMEM87B	Q96K49	555 aa		10.84	□□□□□ -0.67
NPIPA1-205	ENST00000537062	NCOA5	Q9HCD5	579 aa	Known RBP	10.84	□□□□□ -0.67
NPIPA1-205	ENST00000537062	ZMYM6	O95789	1325 aa		10.84	□□□□□ -0.67
NPIPA1-205	ENST00000537062	MAP3K15	Q6ZN16	1313 aa		10.84	□□□□□ -0.67
NPIPA1-205	ENST00000537062	CPD	O75976	1380 aa		10.83	□□□□□ -0.68
NPIPA1-205	ENST00000537062	GOLGA8B	A8MQT2	603 aa		10.83	□□□□□ -0.68
NPIPA1-205	ENST00000537062		M0R2C6	588 aa		10.83	□□□□□ -0.68
NPIPA1-205	ENST00000537062	FOSB	P53539	338 aa		10.83	□□□□□ -0.68
NPIPA1-205	ENST00000537062	ZC3H6	P61129	1189 aa	Known RBP	10.83	□□□□□ -0.68
NPIPA1-205	ENST00000537062	MYL5	Q02045	173 aa		10.83	□□□□□ -0.68
NPIPA1-205	ENST00000537062	GUCY1B3	Q02153	619 aa		10.83	□□□□□ -0.68
NPIPA1-205	ENST00000537062	KIF23	Q02241	960 aa	Predicted RBP	10.83	□□□□□ -0.68
NPIPA1-205	ENST00000537062	GNL2	Q13823	731 aa	Known RBP	10.83	□□□□□ -0.68
NPIPA1-205	ENST00000537062	CCDC102B	Q68D86	513 aa		10.83	□□□□□ -0.68
NPIPA1-205	ENST00000537062	KANK3	Q6NY19	840 aa		10.83	□□□□□ -0.68
NPIPA1-205	ENST00000537062	NBPF11	Q86T75	865 aa		10.83	□□□□□ -0.68
NPIPA1-205	ENST00000537062	HOMER1	Q86YM7	354 aa		10.83	□□□□□ -0.68
NPIPA1-205	ENST00000537062	PPP1R13B	Q96KQ4	1090 aa		10.83	□□□□□ -0.68
NPIPA1-205	ENST00000537062	PLA2G12B	Q9BX93	195 aa		10.83	□□□□□ -0.68
NPIPA1-205	ENST00000537062	TEX13A	Q9BXU3	409 aa	Predicted RBP	10.83	□□□□□ -0.68
NPIPA1-205	ENST00000537062	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	10.83	□□□□□ -0.68
NPIPA1-205	ENST00000537062	TRMT1	Q9NXH9	659 aa	Known RBP	10.83	□□□□□ -0.68
NPIPA1-205	ENST00000537062	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	10.83	□□□□□ -0.68
NPIPA1-205	ENST00000537062	CLIC4	Q9Y696	253 aa		10.83	□□□□□ -0.68
NPIPA1-205	ENST00000537062	DDX60	Q8IY21	1712 aa	Known RBP	10.83	□□□□□ -0.68
NPIPA1-205	ENST00000537062	C1orf167	Q5SNV9	1468 aa		10.82	□□□□□ -0.68
NPIPA1-205	ENST00000537062	USP27X	A6NNY8	438 aa		10.82	□□□□□ -0.68
NPIPA1-205	ENST00000537062	SERPINC1	P01008	464 aa		10.82	□□□□□ -0.68
NPIPA1-205	ENST00000537062	FGA	P02671	866 aa		10.82	□□□□□ -0.68
NPIPA1-205	ENST00000537062	PFKFB1	P16118	471 aa		10.82	□□□□□ -0.68
NPIPA1-205	ENST00000537062	UBASH3A	P57075	661 aa		10.82	□□□□□ -0.68
NPIPA1-205	ENST00000537062	FKBP4	Q02790	459 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
NPIPA1-205	ENST00000537062	ARID5B	Q14865	1188 aa		10.82	□□□□□ -0.68
NPIPA1-205	ENST00000537062	DPCR1	Q3MIW9	517 aa		10.82	□□□□□ -0.68
NPIPA1-205	ENST00000537062	KMT5B	Q4FZB7	885 aa		10.82	□□□□□ -0.68
NPIPA1-205	ENST00000537062	CCDC93	Q567U6	631 aa		10.82	□□□□□ -0.68
NPIPA1-205	ENST00000537062	TAF7L	Q5H9L4	462 aa		10.82	□□□□□ -0.68
NPIPA1-205	ENST00000537062	TEX35	Q5T0J7	233 aa		10.82	□□□□□ -0.68
NPIPA1-205	ENST00000537062	AXDND1	Q5T1B0	1012 aa	Predicted RBP	10.82	□□□□□ -0.68
NPIPA1-205	ENST00000537062	E4F1	Q66K89	784 aa	Predicted RBP	10.82	□□□□□ -0.68
NPIPA1-205	ENST00000537062	UBXN4	Q92575	508 aa		10.82	□□□□□ -0.68
NPIPA1-205	ENST00000537062	OSBP2	Q969R2	916 aa		10.82	□□□□□ -0.68
NPIPA1-205	ENST00000537062	MPHOSPH8	Q99549	860 aa		10.82	□□□□□ -0.68
NPIPA1-205	ENST00000537062	ANGEL1	Q9UNK9	670 aa	Known RBP	10.82	□□□□□ -0.68
NPIPA1-205	ENST00000537062	STK36	Q9NRP7	1315 aa		10.82	□□□□□ -0.68
NPIPA1-205	ENST00000537062	C4A	P0C0L4	1744 aa		10.81	□□□□□ -0.68
NPIPA1-205	ENST00000537062	C4B	P0C0L5	1744 aa		10.81	□□□□□ -0.68
NPIPA1-205	ENST00000537062	TJP1	Q07157	1748 aa		10.81	□□□□□ -0.68
NPIPA1-205	ENST00000537062	UBR2	Q8IWV8	1755 aa		10.81	□□□□□ -0.68
NPIPA1-205	ENST00000537062	CYP27B1	O15528	508 aa		10.81	□□□□□ -0.68
NPIPA1-205	ENST00000537062	ARHGAP6	O43182	974 aa		10.81	□□□□□ -0.68
NPIPA1-205	ENST00000537062	PCCA	P05165	728 aa	Predicted RBP	10.81	□□□□□ -0.68
NPIPA1-205	ENST00000537062	POLR3D	P05423	398 aa	Predicted RBP	10.81	□□□□□ -0.68
NPIPA1-205	ENST00000537062	TOP1	P11387	765 aa	Known RBP	10.81	□□□□□ -0.68
NPIPA1-205	ENST00000537062	H2AFX	P16104	143 aa	Predicted RBP	10.81	□□□□□ -0.68
NPIPA1-205	ENST00000537062	TCIRG1	Q13488	830 aa		10.81	□□□□□ -0.68
NPIPA1-205	ENST00000537062	TUBB2A	Q13885	445 aa		10.81	□□□□□ -0.68
NPIPA1-205	ENST00000537062	NCAPH	Q15003	741 aa		10.81	□□□□□ -0.68
NPIPA1-205	ENST00000537062	SAFB	Q15424	915 aa	Known RBP eCLIP	10.81	□□□□□ -0.68
NPIPA1-205	ENST00000537062	TERF2	Q15554	542 aa		10.81	□□□□□ -0.68
NPIPA1-205	ENST00000537062	ALX1	Q15699	326 aa		10.81	□□□□□ -0.68
NPIPA1-205	ENST00000537062	RESP18	Q5W5W9	173 aa		10.81	□□□□□ -0.68
NPIPA1-205	ENST00000537062	ARMCX5	Q6P1M9	558 aa		10.81	□□□□□ -0.68
NPIPA1-205	ENST00000537062	TRIML1	Q8N9V2	468 aa		10.81	□□□□□ -0.68
NPIPA1-205	ENST00000537062	MNS1	Q8NEH6	495 aa		10.81	□□□□□ -0.68
NPIPA1-205	ENST00000537062	XAGE2	Q96GT9	111 aa		10.81	□□□□□ -0.68
NPIPA1-205	ENST00000537062	ALG1	Q9BT22	464 aa		10.81	□□□□□ -0.68
NPIPA1-205	ENST00000537062	MTA3	Q9BTC8	594 aa		10.81	□□□□□ -0.68
NPIPA1-205	ENST00000537062	ISCA1	Q9BUE6	129 aa		10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms