RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 AKAP11Q9UKA4 1901 aa18.66■□□□□ 0.58
CHMP1A-202ENST00000535997 SPTLC2O15270 562 aa18.66■□□□□ 0.58
CHMP1A-202ENST00000535997 ANGEL1Q9UNK9 670 aaKnown RBP18.66■□□□□ 0.58
CHMP1A-202ENST00000535997 TOGARAM1Q9Y4F4 1720 aa18.66■□□□□ 0.58
CHMP1A-202ENST00000535997 A0A1B0GVL5 298 aa18.66■□□□□ 0.58
CHMP1A-202ENST00000535997 GPTP24298 496 aa18.66■□□□□ 0.58
CHMP1A-202ENST00000535997 NDUFA8P51970 172 aa18.66■□□□□ 0.58
CHMP1A-202ENST00000535997 CCDC144BQ3MJ40 725 aa18.66■□□□□ 0.58
CHMP1A-202ENST00000535997 LRRC8AQ8IWT6 810 aa18.66■□□□□ 0.58
CHMP1A-202ENST00000535997 CCDC144CPQ8IYA2 1237 aa18.66■□□□□ 0.58
CHMP1A-202ENST00000535997 IRS4O14654 1257 aaPredicted RBP18.65■□□□□ 0.58
CHMP1A-202ENST00000535997 KIAA1468Q9P260 1216 aa18.65■□□□□ 0.58
CHMP1A-202ENST00000535997 RIOK3O14730 519 aaKnown RBP18.65■□□□□ 0.58
CHMP1A-202ENST00000535997 TRMT112Q9UI30 125 aaKnown RBP18.65■□□□□ 0.58
CHMP1A-202ENST00000535997 ATRNO75882 1429 aa18.64■□□□□ 0.58
CHMP1A-202ENST00000535997 PDE8AO60658 829 aa18.64■□□□□ 0.57
CHMP1A-202ENST00000535997 CDKL5O76039 1030 aa18.64■□□□□ 0.57
CHMP1A-202ENST00000535997 UQCRFS1P1P0C7P4 283 aa18.64■□□□□ 0.57
CHMP1A-202ENST00000535997 CYP19A1P11511 503 aaPredicted RBP18.64■□□□□ 0.57
CHMP1A-202ENST00000535997 KIF23Q02241 960 aaPredicted RBP18.64■□□□□ 0.57
CHMP1A-202ENST00000535997 NBPF3Q9H094 633 aa18.64■□□□□ 0.57
CHMP1A-202ENST00000535997 TBC1D2BQ9UPU7 963 aa18.64■□□□□ 0.57
CHMP1A-202ENST00000535997 RBM6P78332 1123 aaKnown RBP18.63■□□□□ 0.57
CHMP1A-202ENST00000535997 ZRSR1Q15695 479 aaKnown RBP18.63■□□□□ 0.57
CHMP1A-202ENST00000535997 ANO1Q5XXA6 986 aa18.63■□□□□ 0.57
CHMP1A-202ENST00000535997 ZNF710Q8N1W2 664 aa18.63■□□□□ 0.57
CHMP1A-202ENST00000535997 BPIFA3Q9BQP9 254 aa18.63■□□□□ 0.57
CHMP1A-202ENST00000535997 ZMYM6O95789 1325 aa18.63■□□□□ 0.57
CHMP1A-202ENST00000535997 ERVV-1B6SEH8 477 aa18.63■□□□□ 0.57
CHMP1A-202ENST00000535997 CTIFO43310 598 aaKnown RBP18.63■□□□□ 0.57
CHMP1A-202ENST00000535997 APPP05067 770 aa18.63■□□□□ 0.57
CHMP1A-202ENST00000535997 CMA1P23946 247 aa18.63■□□□□ 0.57
CHMP1A-202ENST00000535997 ARID4AP29374 1257 aaPredicted RBP18.63■□□□□ 0.57
CHMP1A-202ENST00000535997 CCDC102BQ68D86 513 aa18.63■□□□□ 0.57
CHMP1A-202ENST00000535997 DDX60Q8IY21 1712 aaKnown RBP18.63■□□□□ 0.57
CHMP1A-202ENST00000535997 IDH1O75874 414 aaKnown RBP18.62■□□□□ 0.57
CHMP1A-202ENST00000535997 CPLX2Q6PUV4 134 aaKnown RBP18.62■□□□□ 0.57
CHMP1A-202ENST00000535997 TSC1Q92574 1164 aa18.62■□□□□ 0.57
CHMP1A-202ENST00000535997 TMEM87BQ96K49 555 aa18.62■□□□□ 0.57
CHMP1A-202ENST00000535997 PIH1D3Q9NQM4 214 aaKnown RBP18.62■□□□□ 0.57
CHMP1A-202ENST00000535997 PAXBP1Q9Y5B6 917 aa18.62■□□□□ 0.57
CHMP1A-202ENST00000535997 METAP2P50579 478 aaKnown RBP eCLIP18.62■□□□□ 0.572e-6■■■■□ 22.8
CHMP1A-202ENST00000535997 SLC39A14Q15043 492 aa18.62■□□□□ 0.57
CHMP1A-202ENST00000535997 ALX1Q15699 326 aa18.62■□□□□ 0.57
CHMP1A-202ENST00000535997 AXDND1Q5T1B0 1012 aaPredicted RBP18.62■□□□□ 0.57
CHMP1A-202ENST00000535997 ZNF532Q9HCE3 1301 aa18.62■□□□□ 0.57
CHMP1A-202ENST00000535997 ABCA3Q99758 1704 aa18.62■□□□□ 0.57
CHMP1A-202ENST00000535997 SH2B2O14492 632 aaPredicted RBP18.61■□□□□ 0.57
CHMP1A-202ENST00000535997 ZNF202O95125 648 aa18.61■□□□□ 0.57
CHMP1A-202ENST00000535997 TBC1D10CQ8IV04 446 aa18.61■□□□□ 0.57
CHMP1A-202ENST00000535997 LPIN2Q92539 896 aa18.61■□□□□ 0.57
CHMP1A-202ENST00000535997 BCL2L12Q9HB09 334 aa18.61■□□□□ 0.57
CHMP1A-202ENST00000535997 GJB4Q9NTQ9 266 aa18.61■□□□□ 0.57
CHMP1A-202ENST00000535997 MYH3P11055 1940 aa18.61■□□□□ 0.57
CHMP1A-202ENST00000535997 KIF28PB7ZC32 967 aa18.61■□□□□ 0.57
CHMP1A-202ENST00000535997 SLC3A2P08195 630 aaKnown RBP18.61■□□□□ 0.57
CHMP1A-202ENST00000535997 PDE6AP16499 860 aa18.61■□□□□ 0.57
CHMP1A-202ENST00000535997 PUM3Q15397 648 aaKnown RBP18.61■□□□□ 0.57
CHMP1A-202ENST00000535997 CYB5R4Q7L1T6 521 aa18.61■□□□□ 0.57
CHMP1A-202ENST00000535997 RAB11FIP4Q86YS3 637 aa18.61■□□□□ 0.57
CHMP1A-202ENST00000535997 AOPEPQ8N6M6 819 aa18.61■□□□□ 0.57
CHMP1A-202ENST00000535997 ERCC4Q92889 916 aaPredicted RBP18.61■□□□□ 0.57
CHMP1A-202ENST00000535997 AK7Q96M32 723 aa18.61■□□□□ 0.57
CHMP1A-202ENST00000535997 C16orf45Q96MC5 204 aaPredicted RBP18.61■□□□□ 0.57
CHMP1A-202ENST00000535997 SLC4A9Q96Q91 983 aa18.61■□□□□ 0.57
CHMP1A-202ENST00000535997 STRBPQ96SI9 672 aaKnown RBP18.61■□□□□ 0.57
CHMP1A-202ENST00000535997 MROH5Q6ZUA9 1318 aa18.61■□□□□ 0.57
CHMP1A-202ENST00000535997 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.6■□□□□ 0.57
CHMP1A-202ENST00000535997 TCRBV5S4A2TA0A5A2 114 aa18.6■□□□□ 0.57
CHMP1A-202ENST00000535997 TNNT1P13805 278 aa18.6■□□□□ 0.57
CHMP1A-202ENST00000535997 PHKA1P46020 1223 aa18.6■□□□□ 0.57
CHMP1A-202ENST00000535997 APOA5Q6Q788 366 aa18.6■□□□□ 0.57
CHMP1A-202ENST00000535997 TIGD1Q96MW7 591 aa18.6■□□□□ 0.57
CHMP1A-202ENST00000535997 ALG1Q9BT22 464 aa18.6■□□□□ 0.57
CHMP1A-202ENST00000535997 BCL9O00512 1426 aa18.6■□□□□ 0.57
CHMP1A-202ENST00000535997 A0A087WWV3 80 aa18.6■□□□□ 0.57
CHMP1A-202ENST00000535997 IL6STP40189 918 aaPredicted RBP18.6■□□□□ 0.57
CHMP1A-202ENST00000535997 TPD52L1Q16890 204 aaPredicted RBP18.6■□□□□ 0.57
CHMP1A-202ENST00000535997 IGDCC4Q8TDY8 1250 aa18.6■□□□□ 0.57
CHMP1A-202ENST00000535997 AIDAQ96BJ3 306 aa18.6■□□□□ 0.57
CHMP1A-202ENST00000535997 CCDC94Q9BW85 323 aaPredicted RBP18.6■□□□□ 0.57
CHMP1A-202ENST00000535997 NEDD4P46934 1319 aa18.59■□□□□ 0.57
CHMP1A-202ENST00000535997 ITGB4P16144 1822 aa18.59■□□□□ 0.57
CHMP1A-202ENST00000535997 SMTNL1A8MU46 457 aa18.59■□□□□ 0.57
CHMP1A-202ENST00000535997 PATL2C9JE40 543 aaKnown RBP18.59■□□□□ 0.57
CHMP1A-202ENST00000535997 SKILP12757 684 aa18.59■□□□□ 0.57
CHMP1A-202ENST00000535997 FGFR2P21802 821 aa18.59■□□□□ 0.57
CHMP1A-202ENST00000535997 GSDMDP57764 484 aa18.59■□□□□ 0.57
CHMP1A-202ENST00000535997 SGMS1Q86VZ5 419 aa18.59■□□□□ 0.57
CHMP1A-202ENST00000535997 BTG4Q9NY30 223 aa18.59■□□□□ 0.57
CHMP1A-202ENST00000535997 IMPACTQ9P2X3 320 aa18.59■□□□□ 0.57
CHMP1A-202ENST00000535997 DENND2AQ9ULE3 1009 aa18.59■□□□□ 0.57
CHMP1A-202ENST00000535997 ZBTB1Q9Y2K1 713 aa18.59■□□□□ 0.57
CHMP1A-202ENST00000535997 PPP6R2O75170 966 aa18.58■□□□□ 0.57
CHMP1A-202ENST00000535997 LIFRP42702 1097 aa18.58■□□□□ 0.57
CHMP1A-202ENST00000535997 ZNF34Q8IZ26 560 aa18.58■□□□□ 0.57
CHMP1A-202ENST00000535997 JMYQ8N9B5 988 aa18.58■□□□□ 0.57
CHMP1A-202ENST00000535997 B4E1Z4 1266 aa18.58■□□□□ 0.56
CHMP1A-202ENST00000535997 ZBTB43O43298 467 aa18.58■□□□□ 0.56
CHMP1A-202ENST00000535997 NLRP12P59046 1061 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms