RNA–Protein interactions for RNA: ENST00000535222.5

CPSF7-214, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-214ENST00000535222 COA1Q9GZY4 146 aa9.99□□□□□ -0.81
CPSF7-214ENST00000535222 THEGQ9P2T0 379 aa9.99□□□□□ -0.81
CPSF7-214ENST00000535222 REV3LO60673 3130 aa9.99□□□□□ -0.81
CPSF7-214ENST00000535222 SPDYE2BA6NHP3 402 aa9.98□□□□□ -0.81
CPSF7-214ENST00000535222 SPDYE6P0CI01 402 aa9.98□□□□□ -0.81
CPSF7-214ENST00000535222 TMEM31Q5JXX7 168 aa9.98□□□□□ -0.81
CPSF7-214ENST00000535222 AKNAD1Q5T1N1 836 aa9.98□□□□□ -0.81
CPSF7-214ENST00000535222 TTLL5Q6EMB2 1281 aa9.98□□□□□ -0.81
CPSF7-214ENST00000535222 ERO1BQ86YB8 467 aa9.98□□□□□ -0.81
CPSF7-214ENST00000535222 KIAA0825Q8IV33 1275 aa9.98□□□□□ -0.81
CPSF7-214ENST00000535222 TEPSINQ96N21 525 aa9.98□□□□□ -0.81
CPSF7-214ENST00000535222 C11orf16Q9NQ32 467 aa9.98□□□□□ -0.81
CPSF7-214ENST00000535222 SPTBN4Q9H254 2564 aa9.98□□□□□ -0.81
CPSF7-214ENST00000535222 C5orf42Q9H799 3197 aa9.97□□□□□ -0.81
CPSF7-214ENST00000535222 BMP1P13497 986 aa9.97□□□□□ -0.81
CPSF7-214ENST00000535222 PPIL2Q13356 520 aa9.97□□□□□ -0.81
CPSF7-214ENST00000535222 MOGSQ13724 837 aa9.97□□□□□ -0.81
CPSF7-214ENST00000535222 GRIN2CQ14957 1233 aa9.97□□□□□ -0.81
CPSF7-214ENST00000535222 SHHQ15465 462 aa9.97□□□□□ -0.81
CPSF7-214ENST00000535222 PNISRQ8TF01 805 aaKnown RBP9.97□□□□□ -0.81
CPSF7-214ENST00000535222 RTF1Q92541 710 aaKnown RBP9.97□□□□□ -0.81
CPSF7-214ENST00000535222 PRMT6Q96LA8 375 aaPredicted RBP9.97□□□□□ -0.81
CPSF7-214ENST00000535222 EPHX3Q9H6B9 360 aa9.97□□□□□ -0.81
CPSF7-214ENST00000535222 SEC31BQ9NQW1 1179 aa9.97□□□□□ -0.81
CPSF7-214ENST00000535222 SNCAIPQ9Y6H5 919 aa9.97□□□□□ -0.81
CPSF7-214ENST00000535222 DDX60LQ5H9U9 1706 aaKnown RBP9.96□□□□□ -0.81
CPSF7-214ENST00000535222 ECM29Q5VYK3 1845 aa9.96□□□□□ -0.81
CPSF7-214ENST00000535222 MGAMO43451 1857 aa9.96□□□□□ -0.81
CPSF7-214ENST00000535222 PDHXO00330 501 aa9.96□□□□□ -0.82
CPSF7-214ENST00000535222 MYO1BO43795 1136 aa9.96□□□□□ -0.82
CPSF7-214ENST00000535222 LRRC26Q2I0M4 334 aa9.96□□□□□ -0.82
CPSF7-214ENST00000535222 NCBP3Q53F19 620 aaKnown RBP9.96□□□□□ -0.82
CPSF7-214ENST00000535222 AMER1Q5JTC6 1135 aaPredicted RBP9.96□□□□□ -0.82
CPSF7-214ENST00000535222 FAM89AQ96GI7 184 aa9.96□□□□□ -0.82
CPSF7-214ENST00000535222 MIS18AQ9NYP9 233 aa9.96□□□□□ -0.82
CPSF7-214ENST00000535222 CSADQ9Y600 493 aa9.96□□□□□ -0.82
CPSF7-214ENST00000535222 MYO9BQ13459 2157 aa9.96□□□□□ -0.82
CPSF7-214ENST00000535222 CHD7Q9P2D1 2997 aa9.96□□□□□ -0.82
CPSF7-214ENST00000535222 DOCK3Q8IZD9 2030 aa9.95□□□□□ -0.82
CPSF7-214ENST00000535222 CACNA1BQ00975 2339 aa9.95□□□□□ -0.82
CPSF7-214ENST00000535222 PKD1L2Q7Z442 2459 aa9.95□□□□□ -0.82
CPSF7-214ENST00000535222 PPATQ06203 517 aa9.95□□□□□ -0.82
CPSF7-214ENST00000535222 ISCA1Q9BUE6 129 aa9.95□□□□□ -0.82
CPSF7-214ENST00000535222 RSPH6AQ9H0K4 717 aa9.95□□□□□ -0.82
CPSF7-214ENST00000535222 PCDHAC2Q9Y5I4 1007 aa9.95□□□□□ -0.82
CPSF7-214ENST00000535222 AOX1Q06278 1338 aa9.94□□□□□ -0.82
CPSF7-214ENST00000535222 TRIM28Q13263 835 aaKnown RBP9.94□□□□□ -0.82
CPSF7-214ENST00000535222 TNFAIP1Q13829 316 aa9.94□□□□□ -0.82
CPSF7-214ENST00000535222 DCTN1Q14203 1278 aa9.94□□□□□ -0.82
CPSF7-214ENST00000535222 C9orf50Q5SZB4 431 aa9.94□□□□□ -0.82
CPSF7-214ENST00000535222 COPS6Q7L5N1 327 aa9.94□□□□□ -0.82
CPSF7-214ENST00000535222 POTEDQ86YR6 584 aa9.94□□□□□ -0.82
CPSF7-214ENST00000535222 CERS5Q8N5B7 392 aa9.94□□□□□ -0.82
CPSF7-214ENST00000535222 LBHD1Q9BQE6 289 aaPredicted RBP9.94□□□□□ -0.82
CPSF7-214ENST00000535222 THUMPD2Q9BTF0 503 aaKnown RBP9.94□□□□□ -0.82
CPSF7-214ENST00000535222 KCNH4Q9UQ05 1017 aa9.94□□□□□ -0.82
CPSF7-214ENST00000535222 CHD8Q9HCK8 2581 aa9.94□□□□□ -0.82
CPSF7-214ENST00000535222 CLRN2A0PK11 232 aa9.93□□□□□ -0.82
CPSF7-214ENST00000535222 IRS4O14654 1257 aaPredicted RBP9.93□□□□□ -0.82
CPSF7-214ENST00000535222 HMGCRP04035 888 aa9.93□□□□□ -0.82
CPSF7-214ENST00000535222 PRKAR2BP31323 418 aa9.93□□□□□ -0.82
CPSF7-214ENST00000535222 FKBP1AP62942 108 aaKnown RBP9.93□□□□□ -0.82
CPSF7-214ENST00000535222 PROSER3Q2NL68 480 aa9.93□□□□□ -0.82
CPSF7-214ENST00000535222 CFAP100Q494V2 611 aa9.93□□□□□ -0.82
CPSF7-214ENST00000535222 MAP3K21Q5TCX8 1036 aa9.93□□□□□ -0.82
CPSF7-214ENST00000535222 POTEEQ6S8J3 1075 aa9.93□□□□□ -0.82
CPSF7-214ENST00000535222 TXNRD3Q86VQ6 643 aa9.93□□□□□ -0.82
CPSF7-214ENST00000535222 CDAN1Q8IWY9 1227 aa9.93□□□□□ -0.82
CPSF7-214ENST00000535222 HMX1Q9NP08 348 aaPredicted RBP9.93□□□□□ -0.82
CPSF7-214ENST00000535222 CXXC1Q9P0U4 656 aaPredicted RBP9.93□□□□□ -0.82
CPSF7-214ENST00000535222 NPM3O75607 178 aaKnown RBP9.92□□□□□ -0.82
CPSF7-214ENST00000535222 GTF2IP78347 998 aa9.92□□□□□ -0.82
CPSF7-214ENST00000535222 NHLH1Q02575 133 aa9.92□□□□□ -0.82
CPSF7-214ENST00000535222 SPDYE2Q495Y8 402 aa9.92□□□□□ -0.82
CPSF7-214ENST00000535222 GPAT2Q6NUI2 795 aa9.92□□□□□ -0.82
CPSF7-214ENST00000535222 NECAB3Q96P71 396 aaPredicted RBP9.92□□□□□ -0.82
CPSF7-214ENST00000535222 PARK7Q99497 189 aaKnown RBP9.92□□□□□ -0.82
CPSF7-214ENST00000535222 KCNH6Q9H252 994 aa9.92□□□□□ -0.82
CPSF7-214ENST00000535222 VEZTQ9HBM0 779 aa9.92□□□□□ -0.82
CPSF7-214ENST00000535222 KNSTRNQ9Y448 316 aa9.92□□□□□ -0.82
CPSF7-214ENST00000535222 DCHS1Q96JQ0 3298 aa9.92□□□□□ -0.82
CPSF7-214ENST00000535222 EPG5Q9HCE0 2579 aa9.91□□□□□ -0.82
CPSF7-214ENST00000535222 U2AF1L5P0DN76 240 aaPredicted RBP9.91□□□□□ -0.82
CPSF7-214ENST00000535222 CCT4P50991 539 aaKnown RBP9.91□□□□□ -0.82
CPSF7-214ENST00000535222 U2AF1Q01081 240 aaKnown RBP eCLIP9.91□□□□□ -0.82
CPSF7-214ENST00000535222 XAGE3Q8WTP9 111 aa9.91□□□□□ -0.82
CPSF7-214ENST00000535222 BSDC1Q9NW68 430 aaPredicted RBP9.91□□□□□ -0.82
CPSF7-214ENST00000535222 MINPP1Q9UNW1 487 aa9.91□□□□□ -0.82
CPSF7-214ENST00000535222 ZFHX4Q86UP3 3567 aa9.91□□□□□ -0.82
CPSF7-214ENST00000535222 TCF20Q9UGU0 1960 aaKnown RBP9.9□□□□□ -0.82
CPSF7-214ENST00000535222 TNPO2O14787 897 aaKnown RBP9.9□□□□□ -0.82
CPSF7-214ENST00000535222 U2SURPO15042 1029 aaKnown RBP9.9□□□□□ -0.82
CPSF7-214ENST00000535222 LHX8Q68G74 356 aa9.9□□□□□ -0.82
CPSF7-214ENST00000535222 IL27Q8NEV9 243 aa9.9□□□□□ -0.82
CPSF7-214ENST00000535222 FBXW7Q969H0 707 aa9.9□□□□□ -0.82
CPSF7-214ENST00000535222 ZKSCAN4Q969J2 545 aaPredicted RBP9.9□□□□□ -0.82
CPSF7-214ENST00000535222 ZNF576Q9H609 170 aa9.9□□□□□ -0.82
CPSF7-214ENST00000535222 ZNF70Q9UC06 446 aaPredicted RBP9.9□□□□□ -0.82
CPSF7-214ENST00000535222 GJD2Q9UKL4 321 aa9.9□□□□□ -0.82
CPSF7-214ENST00000535222 LEMD3Q9Y2U8 911 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms