RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 IL17RAQ96F46 866 aa10.57□□□□□ -0.72
SF3B2-216ENST00000534765 IQSEC3Q9UPP2 1182 aaPredicted RBP10.57□□□□□ -0.72
SF3B2-216ENST00000534765 CIAO1O76071 339 aa10.57□□□□□ -0.72
SF3B2-216ENST00000534765 FGFR2P21802 821 aa10.57□□□□□ -0.72
SF3B2-216ENST00000534765 AXDND1Q5T1B0 1012 aaPredicted RBP10.57□□□□□ -0.72
SF3B2-216ENST00000534765 MAP4K1Q92918 833 aa10.57□□□□□ -0.72
SF3B2-216ENST00000534765 TMX3Q96JJ7 454 aa10.57□□□□□ -0.72
SF3B2-216ENST00000534765 PUS7LQ9H0K6 701 aaKnown RBP10.57□□□□□ -0.72
SF3B2-216ENST00000534765 PIH1D3Q9NQM4 214 aaKnown RBP10.57□□□□□ -0.72
SF3B2-216ENST00000534765 RBM8AQ9Y5S9 174 aaKnown RBP10.57□□□□□ -0.72
SF3B2-216ENST00000534765 CCDC171Q6TFL3 1326 aa10.57□□□□□ -0.72
SF3B2-216ENST00000534765 MBD3O95983 291 aa10.57□□□□□ -0.72
SF3B2-216ENST00000534765 TM4SF1P30408 202 aa10.57□□□□□ -0.72
SF3B2-216ENST00000534765 TCHHQ07283 1943 aa10.57□□□□□ -0.72
SF3B2-216ENST00000534765 REC8O95072 547 aa10.56□□□□□ -0.72
SF3B2-216ENST00000534765 FKBP4Q02790 459 aaKnown RBP eCLIP10.56□□□□□ -0.72
SF3B2-216ENST00000534765 LMBRD1Q9NUN5 540 aa10.56□□□□□ -0.72
SF3B2-216ENST00000534765 TRMT1Q9NXH9 659 aaKnown RBP10.56□□□□□ -0.72
SF3B2-216ENST00000534765 PYCARDQ9ULZ3 195 aa10.56□□□□□ -0.72
SF3B2-216ENST00000534765 CNTNAP4Q9C0A0 1308 aa10.56□□□□□ -0.72
SF3B2-216ENST00000534765 DOCK2Q92608 1830 aa10.56□□□□□ -0.72
SF3B2-216ENST00000534765 ST18O60284 1047 aa10.56□□□□□ -0.72
SF3B2-216ENST00000534765 INCENPQ9NQS7 918 aa10.56□□□□□ -0.72
SF3B2-216ENST00000534765 PAG1Q9NWQ8 432 aa10.56□□□□□ -0.72
SF3B2-216ENST00000534765 NSFL1CQ9UNZ2 370 aaKnown RBP10.56□□□□□ -0.72
SF3B2-216ENST00000534765 SH3TC1Q8TE82 1336 aa10.56□□□□□ -0.72
SF3B2-216ENST00000534765 SLC27A2O14975 620 aa10.56□□□□□ -0.72
SF3B2-216ENST00000534765 LMAN1P49257 510 aa10.56□□□□□ -0.72
SF3B2-216ENST00000534765 AK2P54819 239 aa10.56□□□□□ -0.72
SF3B2-216ENST00000534765 ZNF827Q17R98 1081 aa10.56□□□□□ -0.72
SF3B2-216ENST00000534765 TXNRD3Q86VQ6 643 aa10.56□□□□□ -0.72
SF3B2-216ENST00000534765 PDLIM2Q96JY6 352 aa10.56□□□□□ -0.72
SF3B2-216ENST00000534765 GPR101Q96P66 508 aaPredicted RBP10.56□□□□□ -0.72
SF3B2-216ENST00000534765 UTP14AQ9BVJ6 771 aaKnown RBP10.56□□□□□ -0.72
SF3B2-216ENST00000534765 MAST3O60307 1309 aa10.56□□□□□ -0.72
SF3B2-216ENST00000534765 BCAMP50895 628 aa10.55□□□□□ -0.72
SF3B2-216ENST00000534765 NCBP1Q09161 790 aaKnown RBP10.55□□□□□ -0.72
SF3B2-216ENST00000534765 CREB3L3Q68CJ9 461 aa10.55□□□□□ -0.72
SF3B2-216ENST00000534765 SYT10Q6XYQ8 523 aa10.55□□□□□ -0.72
SF3B2-216ENST00000534765 ZNF384Q8TF68 577 aa10.55□□□□□ -0.72
SF3B2-216ENST00000534765 RABEP1Q15276 862 aa10.55□□□□□ -0.72
SF3B2-216ENST00000534765 ADGRA1Q86SQ6 560 aa10.55□□□□□ -0.72
SF3B2-216ENST00000534765 GPT2Q8TD30 523 aa10.55□□□□□ -0.72
SF3B2-216ENST00000534765 LRRC2Q9BYS8 371 aa10.55□□□□□ -0.72
SF3B2-216ENST00000534765 NBPF3Q9H094 633 aa10.55□□□□□ -0.72
SF3B2-216ENST00000534765 GPHNQ9NQX3 736 aaPredicted RBP10.55□□□□□ -0.72
SF3B2-216ENST00000534765 TRPC5Q9UL62 973 aaPredicted RBP10.55□□□□□ -0.72
SF3B2-216ENST00000534765 ANKRD65E5RJM6 399 aa10.55□□□□□ -0.72
SF3B2-216ENST00000534765 PPFIA3O75145 1194 aa10.55□□□□□ -0.72
SF3B2-216ENST00000534765 PDE8BO95263 885 aa10.55□□□□□ -0.72
SF3B2-216ENST00000534765 CYP21A2P08686 494 aa10.55□□□□□ -0.72
SF3B2-216ENST00000534765 METTL24Q5JXM2 366 aa10.55□□□□□ -0.72
SF3B2-216ENST00000534765 KCNB2Q92953 911 aa10.55□□□□□ -0.72
SF3B2-216ENST00000534765 TRIM5Q9C035 493 aa10.55□□□□□ -0.72
SF3B2-216ENST00000534765 PDGFDQ9GZP0 370 aaPredicted RBP10.55□□□□□ -0.72
SF3B2-216ENST00000534765 ELF2Q15723 593 aa10.54□□□□□ -0.72
SF3B2-216ENST00000534765 ZBTB12Q9Y330 459 aaPredicted RBP10.54□□□□□ -0.72
SF3B2-216ENST00000534765 RPAP1Q9BWH6 1393 aaPredicted RBP10.54□□□□□ -0.72
SF3B2-216ENST00000534765 DHX16O60231 1041 aaKnown RBP10.54□□□□□ -0.72
SF3B2-216ENST00000534765 RPS6KA4O75676 772 aa10.54□□□□□ -0.72
SF3B2-216ENST00000534765 PTGS1P23219 599 aa10.54□□□□□ -0.72
SF3B2-216ENST00000534765 KBTBD3Q8NAB2 608 aa10.54□□□□□ -0.72
SF3B2-216ENST00000534765 WWC3Q9ULE0 1092 aa10.54□□□□□ -0.72
SF3B2-216ENST00000534765 ANKRD31Q8N7Z5 1873 aa10.54□□□□□ -0.72
SF3B2-216ENST00000534765 FIBPO43427 364 aa10.54□□□□□ -0.72
SF3B2-216ENST00000534765 CASTP20810 708 aaKnown RBP10.54□□□□□ -0.72
SF3B2-216ENST00000534765 TTC31Q49AM3 519 aaPredicted RBP10.54□□□□□ -0.72
SF3B2-216ENST00000534765 CCDC102BQ68D86 513 aa10.54□□□□□ -0.72
SF3B2-216ENST00000534765 OLFM4Q6UX06 510 aa10.54□□□□□ -0.72
SF3B2-216ENST00000534765 CHST3Q7LGC8 479 aa10.54□□□□□ -0.72
SF3B2-216ENST00000534765 CTNNA3Q9UI47 895 aa10.54□□□□□ -0.72
SF3B2-216ENST00000534765 IFIT1P09914 478 aaKnown RBP10.53□□□□□ -0.72
SF3B2-216ENST00000534765 RASGRF1Q13972 1273 aa10.53□□□□□ -0.72
SF3B2-216ENST00000534765 EFCC1Q9HA90 598 aa10.53□□□□□ -0.72
SF3B2-216ENST00000534765 CNNM1Q9NRU3 951 aa10.53□□□□□ -0.72
SF3B2-216ENST00000534765 ANKRD18BA2A2Z9 1011 aa10.53□□□□□ -0.72
SF3B2-216ENST00000534765 NFIXQ14938 502 aa10.53□□□□□ -0.72
SF3B2-216ENST00000534765 ICE2Q659A1 982 aa10.53□□□□□ -0.72
SF3B2-216ENST00000534765 NECAB1Q8N987 351 aa10.53□□□□□ -0.72
SF3B2-216ENST00000534765 CEP126Q9P2H0 1117 aa10.53□□□□□ -0.72
SF3B2-216ENST00000534765 NARFQ9UHQ1 456 aa10.53□□□□□ -0.72
SF3B2-216ENST00000534765 JAG2Q9Y219 1238 aa10.53□□□□□ -0.72
SF3B2-216ENST00000534765 TNS1Q9HBL0 1735 aaKnown RBP10.53□□□□□ -0.72
SF3B2-216ENST00000534765 CHRNDQ07001 517 aa10.53□□□□□ -0.72
SF3B2-216ENST00000534765 TOB2Q14106 344 aaPredicted RBP10.53□□□□□ -0.72
SF3B2-216ENST00000534765 POTEAQ6S8J7 498 aa10.53□□□□□ -0.72
SF3B2-216ENST00000534765 CASC1Q6TDU7 716 aa10.53□□□□□ -0.72
SF3B2-216ENST00000534765 ZNF397Q8NF99 534 aaPredicted RBP10.53□□□□□ -0.72
SF3B2-216ENST00000534765 FBXW7Q969H0 707 aa10.53□□□□□ -0.72
SF3B2-216ENST00000534765 GPR108Q9NPR9 543 aa10.53□□□□□ -0.72
SF3B2-216ENST00000534765 DDX41Q9UJV9 622 aaKnown RBP10.53□□□□□ -0.72
SF3B2-216ENST00000534765 TPCN1Q9ULQ1 816 aa10.53□□□□□ -0.72
SF3B2-216ENST00000534765 MYH13Q9UKX3 1938 aa10.53□□□□□ -0.72
SF3B2-216ENST00000534765 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.52□□□□□ -0.72
SF3B2-216ENST00000534765 LEKR1Q6ZMV7 388 aa10.52□□□□□ -0.72
SF3B2-216ENST00000534765 SMARCC1Q92922 1105 aaPredicted RBP10.52□□□□□ -0.72
SF3B2-216ENST00000534765 SRRTQ9BXP5 876 aaKnown RBP10.52□□□□□ -0.72
SF3B2-216ENST00000534765 HMG20BQ9P0W2 317 aa10.52□□□□□ -0.72
SF3B2-216ENST00000534765 CACNA1SQ13698 1873 aa10.52□□□□□ -0.72
SF3B2-216ENST00000534765 GYG1P46976 350 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms