RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 FAM161BQ96MY7 647 aa5.44□□□□□ -1.54
CSMD3-210ENST00000534172 NECAB3Q96P71 396 aaPredicted RBP5.44□□□□□ -1.54
CSMD3-210ENST00000534172 RSRP1Q9BUV0 290 aa5.44□□□□□ -1.54
CSMD3-210ENST00000534172 CYP8B1Q9UNU6 501 aa5.44□□□□□ -1.54
CSMD3-210ENST00000534172 BICRAQ9NZM4 1560 aa5.44□□□□□ -1.54
CSMD3-210ENST00000534172 METTL12A8MUP2 240 aa5.43□□□□□ -1.54
CSMD3-210ENST00000534172 SOX1O00570 391 aaPredicted RBP5.43□□□□□ -1.54
CSMD3-210ENST00000534172 LMNB1P20700 586 aa5.43□□□□□ -1.54
CSMD3-210ENST00000534172 CD68P34810 354 aaPredicted RBP5.43□□□□□ -1.54
CSMD3-210ENST00000534172 ZNF76P36508 570 aa5.43□□□□□ -1.54
CSMD3-210ENST00000534172 CCDC85BQ15834 202 aaPredicted RBP5.43□□□□□ -1.54
CSMD3-210ENST00000534172 IGF2-ASQ6U949 168 aa5.43□□□□□ -1.54
CSMD3-210ENST00000534172 HS2ST1Q7LGA3 356 aa5.43□□□□□ -1.54
CSMD3-210ENST00000534172 C9orf172C9J069 976 aa5.43□□□□□ -1.54
CSMD3-210ENST00000534172 CTSHP09668 335 aa5.43□□□□□ -1.54
CSMD3-210ENST00000534172 SNRPNP63162 240 aaKnown RBP5.43□□□□□ -1.54
CSMD3-210ENST00000534172 NRG1Q02297 640 aaPredicted RBP5.43□□□□□ -1.54
CSMD3-210ENST00000534172 ZNF423Q2M1K9 1284 aa5.43□□□□□ -1.54
CSMD3-210ENST00000534172 TRIM11Q96F44 468 aa5.43□□□□□ -1.54
CSMD3-210ENST00000534172 BACH2Q9BYV9 841 aa5.43□□□□□ -1.54
CSMD3-210ENST00000534172 MRPL18Q9H0U6 180 aaKnown RBP5.43□□□□□ -1.54
CSMD3-210ENST00000534172 ARNTP27540 789 aa5.42□□□□□ -1.54
CSMD3-210ENST00000534172 GSTM4Q03013 218 aa5.42□□□□□ -1.54
CSMD3-210ENST00000534172 SETDB1Q15047 1291 aa5.42□□□□□ -1.54
CSMD3-210ENST00000534172 KRT82Q9NSB4 513 aa5.42□□□□□ -1.54
CSMD3-210ENST00000534172 RECKO95980 971 aa5.42□□□□□ -1.54
CSMD3-210ENST00000534172 CORO1BQ9BR76 489 aa5.42□□□□□ -1.54
CSMD3-210ENST00000534172 RNF19AQ9NV58 838 aa5.42□□□□□ -1.54
CSMD3-210ENST00000534172 CNTNAP5Q8WYK1 1306 aa5.42□□□□□ -1.54
CSMD3-210ENST00000534172 SYNGAP1Q96PV0 1343 aa5.42□□□□□ -1.54
CSMD3-210ENST00000534172 DLL1O00548 723 aa5.41□□□□□ -1.54
CSMD3-210ENST00000534172 POU4F3Q15319 338 aa5.41□□□□□ -1.54
CSMD3-210ENST00000534172 TPTE2Q6XPS3 522 aa5.41□□□□□ -1.54
CSMD3-210ENST00000534172 CCDC84Q86UT8 332 aaPredicted RBP5.41□□□□□ -1.54
CSMD3-210ENST00000534172 SLC7A3Q8WY07 619 aa5.41□□□□□ -1.54
CSMD3-210ENST00000534172 MEGF11A6BM72 1044 aa5.41□□□□□ -1.54
CSMD3-210ENST00000534172 TCF3P15923 654 aa5.41□□□□□ -1.54
CSMD3-210ENST00000534172 FAAP100Q0VG06 881 aa5.4□□□□□ -1.54
CSMD3-210ENST00000534172 SULF2Q8IWU5 870 aa5.4□□□□□ -1.54
CSMD3-210ENST00000534172 TMEM130Q8N3G9 435 aa5.4□□□□□ -1.55
CSMD3-210ENST00000534172 LENG1Q96BZ8 264 aaPredicted RBP5.4□□□□□ -1.55
CSMD3-210ENST00000534172 TRIM37O94972 964 aa5.39□□□□□ -1.55
CSMD3-210ENST00000534172 DUOXA2Q1HG44 320 aa5.39□□□□□ -1.55
CSMD3-210ENST00000534172 KLHDC7BQ96G42 594 aa5.39□□□□□ -1.55
CSMD3-210ENST00000534172 ENC1O14682 589 aa5.39□□□□□ -1.55
CSMD3-210ENST00000534172 DEAF1O75398 565 aaPredicted RBP5.39□□□□□ -1.55
CSMD3-210ENST00000534172 GSTP1P09211 210 aaKnown RBP5.39□□□□□ -1.55
CSMD3-210ENST00000534172 CDC25BP30305 580 aa5.39□□□□□ -1.55
CSMD3-210ENST00000534172 LIG3P49916 1009 aa5.39□□□□□ -1.55
CSMD3-210ENST00000534172 FANCCQ00597 558 aa5.39□□□□□ -1.55
CSMD3-210ENST00000534172 EXOSC6Q5RKV6 272 aaKnown RBP5.39□□□□□ -1.55
CSMD3-210ENST00000534172 MEI1Q5TIA1 1274 aa5.39□□□□□ -1.55
CSMD3-210ENST00000534172 TTBK2Q6IQ55 1244 aa5.39□□□□□ -1.55
CSMD3-210ENST00000534172 LLGL2Q6P1M3 1020 aa5.39□□□□□ -1.55
CSMD3-210ENST00000534172 ERMP1Q7Z2K6 904 aa5.39□□□□□ -1.55
CSMD3-210ENST00000534172 ZNF654Q8IZM8 581 aa5.39□□□□□ -1.55
CSMD3-210ENST00000534172 GGT7Q9UJ14 662 aa5.39□□□□□ -1.55
CSMD3-210ENST00000534172 ROBO2Q9HCK4 1378 aa5.38□□□□□ -1.55
CSMD3-210ENST00000534172 SLFN14P0C7P3 912 aa5.38□□□□□ -1.55
CSMD3-210ENST00000534172 PCNX4Q63HM2 1172 aa5.38□□□□□ -1.55
CSMD3-210ENST00000534172 ADAMTSL4Q6UY14 1074 aa5.38□□□□□ -1.55
CSMD3-210ENST00000534172 AGMOQ6ZNB7 445 aa5.38□□□□□ -1.55
CSMD3-210ENST00000534172 SPATA32Q96LK8 384 aa5.38□□□□□ -1.55
CSMD3-210ENST00000534172 TMEM74Q96NL1 305 aa5.38□□□□□ -1.55
CSMD3-210ENST00000534172 CARD10Q9BWT7 1032 aa5.38□□□□□ -1.55
CSMD3-210ENST00000534172 CEP41Q9BYV8 373 aa5.38□□□□□ -1.55
CSMD3-210ENST00000534172 RNF208Q9H0X6 261 aa5.38□□□□□ -1.55
CSMD3-210ENST00000534172 CYP4F12Q9HCS2 524 aa5.38□□□□□ -1.55
CSMD3-210ENST00000534172 NACADO15069 1562 aa5.38□□□□□ -1.55
CSMD3-210ENST00000534172 LMNB2Q03252 620 aa5.38□□□□□ -1.55
CSMD3-210ENST00000534172 KCNMA1Q12791 1236 aa5.38□□□□□ -1.55
CSMD3-210ENST00000534172 TXNDC11Q6PKC3 985 aa5.38□□□□□ -1.55
CSMD3-210ENST00000534172 TGIF2Q9GZN2 237 aa5.38□□□□□ -1.55
CSMD3-210ENST00000534172 BMP6P22004 513 aa5.37□□□□□ -1.55
CSMD3-210ENST00000534172 LDLRAD1Q5T700 205 aa5.37□□□□□ -1.55
CSMD3-210ENST00000534172 ANKRD34AQ69YU3 496 aa5.37□□□□□ -1.55
CSMD3-210ENST00000534172 GALNT11Q8NCW6 608 aa5.37□□□□□ -1.55
CSMD3-210ENST00000534172 RUSC1Q9BVN2 902 aa5.37□□□□□ -1.55
CSMD3-210ENST00000534172 USP26Q9BXU7 913 aa5.37□□□□□ -1.55
CSMD3-210ENST00000534172 CBX8Q9HC52 389 aa5.37□□□□□ -1.55
CSMD3-210ENST00000534172 TACC3Q9Y6A5 838 aa5.37□□□□□ -1.55
CSMD3-210ENST00000534172 MAOBP27338 520 aa5.37□□□□□ -1.55
CSMD3-210ENST00000534172 GBP2P32456 591 aaPredicted RBP5.37□□□□□ -1.55
CSMD3-210ENST00000534172 CELA3AP09093 270 aa5.36□□□□□ -1.55
CSMD3-210ENST00000534172 PDE3AQ14432 1141 aa5.36□□□□□ -1.55
CSMD3-210ENST00000534172 FOXD4L6Q3SYB3 417 aaPredicted RBP5.36□□□□□ -1.55
CSMD3-210ENST00000534172 FOXD4L3Q6VB84 417 aaPredicted RBP5.36□□□□□ -1.55
CSMD3-210ENST00000534172 USP48Q86UV5 1035 aa5.36□□□□□ -1.55
CSMD3-210ENST00000534172 SMG8Q8ND04 991 aaKnown RBP5.36□□□□□ -1.55
CSMD3-210ENST00000534172 TRIM56Q9BRZ2 755 aaKnown RBP5.36□□□□□ -1.55
CSMD3-210ENST00000534172 NRSN2Q9GZP1 204 aa5.36□□□□□ -1.55
CSMD3-210ENST00000534172 MIR1-1HGQ9H1L0 117 aa5.36□□□□□ -1.55
CSMD3-210ENST00000534172 SUGCTQ9HAC7 445 aa5.36□□□□□ -1.55
CSMD3-210ENST00000534172 RAD18Q9NS91 495 aa5.36□□□□□ -1.55
CSMD3-210ENST00000534172 LOC100289279A0A1B0GTE1 492 aa5.36□□□□□ -1.55
CSMD3-210ENST00000534172 TM4SF5O14894 197 aa5.36□□□□□ -1.55
CSMD3-210ENST00000534172 ZNF157P51786 506 aaPredicted RBP5.36□□□□□ -1.55
CSMD3-210ENST00000534172 NLRP12P59046 1061 aa5.36□□□□□ -1.55
CSMD3-210ENST00000534172 HDLBPQ00341 1268 aaKnown RBP5.36□□□□□ -1.55
CSMD3-210ENST00000534172 ZNF252P-AS1Q0IIN9 211 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms