RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 SFI1A8K8P3 1242 aa9.96□□□□□ -0.82
CASP4-212ENST00000533730 VAMP1P23763 118 aa9.96□□□□□ -0.82
CASP4-212ENST00000533730 TMPOP42166 694 aaKnown RBP9.96□□□□□ -0.82
CASP4-212ENST00000533730 RIPK4P57078 832 aa9.96□□□□□ -0.82
CASP4-212ENST00000533730 DHX9Q08211 1270 aaKnown RBP9.96□□□□□ -0.82
CASP4-212ENST00000533730 CTC1Q2NKJ3 1217 aa9.96□□□□□ -0.82
CASP4-212ENST00000533730 CCDC184Q52MB2 194 aa9.96□□□□□ -0.82
CASP4-212ENST00000533730 RNF20Q5VTR2 975 aa9.96□□□□□ -0.82
CASP4-212ENST00000533730 DIEXFQ68CQ4 756 aaKnown RBP9.96□□□□□ -0.82
CASP4-212ENST00000533730 CCDC102BQ68D86 513 aa9.96□□□□□ -0.82
CASP4-212ENST00000533730 TTC5Q8N0Z6 440 aa9.96□□□□□ -0.82
CASP4-212ENST00000533730 ITPKCQ96DU7 683 aa9.96□□□□□ -0.82
CASP4-212ENST00000533730 LRRC4BQ9NT99 713 aa9.96□□□□□ -0.82
CASP4-212ENST00000533730 ZNF831Q5JPB2 1677 aa9.96□□□□□ -0.82
CASP4-212ENST00000533730 VIRMAQ69YN4 1812 aaKnown RBP9.96□□□□□ -0.82
CASP4-212ENST00000533730 CCER2I3L3R5 266 aa9.95□□□□□ -0.82
CASP4-212ENST00000533730 WDR4P57081 412 aaKnown RBP9.95□□□□□ -0.82
CASP4-212ENST00000533730 SLC15A2Q16348 729 aa9.95□□□□□ -0.82
CASP4-212ENST00000533730 CCDC146Q8IYE0 955 aa9.95□□□□□ -0.82
CASP4-212ENST00000533730 TPCN2Q8NHX9 752 aa9.95□□□□□ -0.82
CASP4-212ENST00000533730 TMPRSS4Q9NRS4 437 aa9.95□□□□□ -0.82
CASP4-212ENST00000533730 RBM19Q9Y4C8 960 aaKnown RBP9.95□□□□□ -0.82
CASP4-212ENST00000533730 PAPPAQ13219 1627 aa9.95□□□□□ -0.82
CASP4-212ENST00000533730 BTBD11A6QL63 1104 aa9.94□□□□□ -0.82
CASP4-212ENST00000533730 ZIC2O95409 532 aaPredicted RBP9.94□□□□□ -0.82
CASP4-212ENST00000533730 RECKO95980 971 aa9.94□□□□□ -0.82
CASP4-212ENST00000533730 HMGB1P09429 215 aaKnown RBP9.94□□□□□ -0.82
CASP4-212ENST00000533730 HSP90B1P14625 803 aaKnown RBP9.94□□□□□ -0.82
CASP4-212ENST00000533730 RAB15P59190 212 aa9.94□□□□□ -0.82
CASP4-212ENST00000533730 R3HDM1Q15032 1099 aaKnown RBP9.94□□□□□ -0.82
CASP4-212ENST00000533730 TAF7Q15545 349 aaPredicted RBP9.94□□□□□ -0.82
CASP4-212ENST00000533730 Q6ZNB5 142 aa9.94□□□□□ -0.82
CASP4-212ENST00000533730 MCM10Q7L590 875 aa9.94□□□□□ -0.82
CASP4-212ENST00000533730 GTF3C2Q8WUA4 911 aaPredicted RBP9.94□□□□□ -0.82
CASP4-212ENST00000533730 MKNK1Q9BUB5 465 aa9.94□□□□□ -0.82
CASP4-212ENST00000533730 ZFAND3Q9H8U3 227 aa9.94□□□□□ -0.82
CASP4-212ENST00000533730 AAASQ9NRG9 546 aa9.94□□□□□ -0.82
CASP4-212ENST00000533730 SEPT3Q9UH03 358 aa9.94□□□□□ -0.82
CASP4-212ENST00000533730 DLG5Q8TDM6 1919 aa9.94□□□□□ -0.82
CASP4-212ENST00000533730 SIPA1L3O60292 1781 aaPredicted RBP9.93□□□□□ -0.82
CASP4-212ENST00000533730 C5P01031 1676 aa9.93□□□□□ -0.82
CASP4-212ENST00000533730 CICQ96RK0 1608 aaPredicted RBP9.93□□□□□ -0.82
CASP4-212ENST00000533730 C21orf2O43822 256 aa9.93□□□□□ -0.82
CASP4-212ENST00000533730 LILRA1O75019 489 aa9.93□□□□□ -0.82
CASP4-212ENST00000533730 PTCD1O75127 700 aaKnown RBP9.93□□□□□ -0.82
CASP4-212ENST00000533730 CALD1Q05682 793 aaKnown RBP9.93□□□□□ -0.82
CASP4-212ENST00000533730 ECM1Q16610 540 aa9.93□□□□□ -0.82
CASP4-212ENST00000533730 ZNF790Q6PG37 636 aa9.93□□□□□ -0.82
CASP4-212ENST00000533730 ZNF784Q8NCA9 323 aaPredicted RBP9.93□□□□□ -0.82
CASP4-212ENST00000533730 FLAD1Q8NFF5 587 aa9.93□□□□□ -0.82
CASP4-212ENST00000533730 ASB16Q96NS5 453 aa9.93□□□□□ -0.82
CASP4-212ENST00000533730 BABAM1Q9NWV8 329 aa9.93□□□□□ -0.82
CASP4-212ENST00000533730 DNMT3AQ9Y6K1 912 aaPredicted RBP9.93□□□□□ -0.82
CASP4-212ENST00000533730 APAF1O14727 1248 aa9.92□□□□□ -0.82
CASP4-212ENST00000533730 KCNQ4P56696 695 aa9.92□□□□□ -0.82
CASP4-212ENST00000533730 SLC39A6Q13433 755 aa9.92□□□□□ -0.82
CASP4-212ENST00000533730 MTMR3Q13615 1198 aa9.92□□□□□ -0.82
CASP4-212ENST00000533730 DCTN1Q14203 1278 aa9.92□□□□□ -0.82
CASP4-212ENST00000533730 NGEFQ8N5V2 710 aa9.92□□□□□ -0.82
CASP4-212ENST00000533730 FMNL2Q96PY5 1086 aa9.92□□□□□ -0.82
CASP4-212ENST00000533730 TEX13AQ9BXU3 409 aaPredicted RBP9.92□□□□□ -0.82
CASP4-212ENST00000533730 TFCP2L1Q9NZI6 479 aa9.92□□□□□ -0.82
CASP4-212ENST00000533730 DCTN4Q9UJW0 460 aa9.92□□□□□ -0.82
CASP4-212ENST00000533730 KCPQ6ZWJ8 1503 aa9.92□□□□□ -0.82
CASP4-212ENST00000533730 TAF1LQ8IZX4 1826 aa9.91□□□□□ -0.82
CASP4-212ENST00000533730 UBR2Q8IWV8 1755 aa9.91□□□□□ -0.82
CASP4-212ENST00000533730 C4BP0C0L5 1744 aa9.91□□□□□ -0.82
CASP4-212ENST00000533730 QSER1Q2KHR3 1735 aa9.91□□□□□ -0.82
CASP4-212ENST00000533730 CNTNAP4Q9C0A0 1308 aa9.91□□□□□ -0.82
CASP4-212ENST00000533730 ST8SIA5O15466 376 aa9.91□□□□□ -0.82
CASP4-212ENST00000533730 CAPN5O15484 640 aaPredicted RBP9.91□□□□□ -0.82
CASP4-212ENST00000533730 ITPK1Q13572 414 aa9.91□□□□□ -0.82
CASP4-212ENST00000533730 ZNF827Q17R98 1081 aa9.91□□□□□ -0.82
CASP4-212ENST00000533730 FAM9BQ8IZU0 186 aa9.91□□□□□ -0.82
CASP4-212ENST00000533730 FAM177A1Q8N128 213 aaPredicted RBP9.91□□□□□ -0.82
CASP4-212ENST00000533730 LINC00116Q8NCU8 138 aa9.91□□□□□ -0.82
CASP4-212ENST00000533730 HINFPQ9BQA5 517 aa9.91□□□□□ -0.82
CASP4-212ENST00000533730 PGPEP1Q9NXJ5 209 aa9.91□□□□□ -0.82
CASP4-212ENST00000533730 RRP7AQ9Y3A4 280 aaKnown RBP9.91□□□□□ -0.82
CASP4-212ENST00000533730 PCDHGA11Q9Y5H2 935 aa9.91□□□□□ -0.82
CASP4-212ENST00000533730 HEG1Q9ULI3 1381 aa9.9□□□□□ -0.82
CASP4-212ENST00000533730 AXIN1O15169 862 aa9.9□□□□□ -0.82
CASP4-212ENST00000533730 STARD3NLO95772 234 aa9.9□□□□□ -0.82
CASP4-212ENST00000533730 ADD1P35611 737 aaKnown RBP9.9□□□□□ -0.82
CASP4-212ENST00000533730 ERVK-9P63128 1117 aa9.9□□□□□ -0.82
CASP4-212ENST00000533730 CAPN12Q6ZSI9 719 aa9.9□□□□□ -0.82
CASP4-212ENST00000533730 Q6ZVU0 165 aa9.9□□□□□ -0.82
CASP4-212ENST00000533730 ZSCAN29Q8IWY8 852 aaPredicted RBP9.9□□□□□ -0.82
CASP4-212ENST00000533730 SLC16A10Q8TF71 515 aa9.9□□□□□ -0.82
CASP4-212ENST00000533730 SREK1Q8WXA9 508 aaKnown RBP9.9□□□□□ -0.82
CASP4-212ENST00000533730 ZNF496Q96IT1 587 aaPredicted RBP9.9□□□□□ -0.82
CASP4-212ENST00000533730 SLC4A9Q96Q91 983 aa9.9□□□□□ -0.82
CASP4-212ENST00000533730 PCDHB11Q9Y5F2 797 aa9.9□□□□□ -0.82
CASP4-212ENST00000533730 SNRPA1P09661 255 aaKnown RBP9.89□□□□□ -0.83
CASP4-212ENST00000533730 SCTRP47872 440 aa9.89□□□□□ -0.83
CASP4-212ENST00000533730 ARHGAP4P98171 946 aa9.89□□□□□ -0.83
CASP4-212ENST00000533730 FKBP4Q02790 459 aaKnown RBP eCLIP9.89□□□□□ -0.83
CASP4-212ENST00000533730 DRC1Q96MC2 740 aa9.89□□□□□ -0.83
CASP4-212ENST00000533730 THUMPD2Q9BTF0 503 aaKnown RBP9.89□□□□□ -0.83
CASP4-212ENST00000533730 DACH1Q9UI36 760 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms