RNA–Protein interactions for RNA: ENST00000533523.5

CHMP4A-207, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best)

Gene CHMP4A, Length 1,266 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-207ENST00000533523 GYG1P46976 350 aa19.84■□□□□ 0.77
CHMP4A-207ENST00000533523 CRHR2Q13324 411 aa19.84■□□□□ 0.77
CHMP4A-207ENST00000533523 SPDYE2Q495Y8 402 aa19.84■□□□□ 0.77
CHMP4A-207ENST00000533523 ANKRD13AQ8IZ07 590 aa19.84■□□□□ 0.77
CHMP4A-207ENST00000533523 CD99L2Q8TCZ2 262 aa19.84■□□□□ 0.77
CHMP4A-207ENST00000533523 SPINK5Q9NQ38 1064 aaPredicted RBP19.84■□□□□ 0.77
CHMP4A-207ENST00000533523 ZNF70Q9UC06 446 aaPredicted RBP19.84■□□□□ 0.77
CHMP4A-207ENST00000533523 PTPN22Q9Y2R2 807 aa19.84■□□□□ 0.77
CHMP4A-207ENST00000533523 AK9Q5TCS8 1911 aa19.83■□□□□ 0.77
CHMP4A-207ENST00000533523 UNCXA6NJT0 531 aa19.83■□□□□ 0.77
CHMP4A-207ENST00000533523 USP2O75604 605 aaPredicted RBP19.83■□□□□ 0.77
CHMP4A-207ENST00000533523 ALDH1L1O75891 902 aa19.83■□□□□ 0.77
CHMP4A-207ENST00000533523 HNRNPUQ00839 825 aaKnown RBP eCLIP19.83■□□□□ 0.77
CHMP4A-207ENST00000533523 OTUD7BQ6GQQ9 843 aa19.83■□□□□ 0.77
CHMP4A-207ENST00000533523 ERO1AQ96HE7 468 aa19.83■□□□□ 0.77
CHMP4A-207ENST00000533523 SUCLG2Q96I99 432 aa19.83■□□□□ 0.77
CHMP4A-207ENST00000533523 PTPN18Q99952 460 aa19.83■□□□□ 0.77
CHMP4A-207ENST00000533523 SRCIN1Q9C0H9 1055 aa19.83■□□□□ 0.77
CHMP4A-207ENST00000533523 TDRD3Q9H7E2 651 aaKnown RBP19.83■□□□□ 0.77
CHMP4A-207ENST00000533523 ELP3Q9H9T3 547 aa19.83■□□□□ 0.77
CHMP4A-207ENST00000533523 SERPINA10Q9UK55 444 aa19.83■□□□□ 0.77
CHMP4A-207ENST00000533523 HIBADHP31937 336 aaKnown RBP19.82■□□□□ 0.76
CHMP4A-207ENST00000533523 UBE4AQ14139 1066 aa19.82■□□□□ 0.76
CHMP4A-207ENST00000533523 TDRD7Q8NHU6 1098 aaKnown RBP19.82■□□□□ 0.76
CHMP4A-207ENST00000533523 OPTNQ96CV9 577 aa19.82■□□□□ 0.76
CHMP4A-207ENST00000533523 PUS3Q9BZE2 481 aaKnown RBP19.82■□□□□ 0.76
CHMP4A-207ENST00000533523 ZNF521Q96K83 1311 aa19.81■□□□□ 0.76
CHMP4A-207ENST00000533523 TCP10L2B9ZVM9 353 aa19.81■□□□□ 0.76
CHMP4A-207ENST00000533523 VPS37DQ86XT2 251 aa19.81■□□□□ 0.76
CHMP4A-207ENST00000533523 CDAN1Q8IWY9 1227 aa19.81■□□□□ 0.76
CHMP4A-207ENST00000533523 CRKP46108 304 aa19.8■□□□□ 0.76
CHMP4A-207ENST00000533523 CHAF1AQ13111 956 aaPredicted RBP19.8■□□□□ 0.76
CHMP4A-207ENST00000533523 DZIP1LQ8IYY4 767 aaKnown RBP19.8■□□□□ 0.76
CHMP4A-207ENST00000533523 OTUD5Q96G74 571 aa19.8■□□□□ 0.76
CHMP4A-207ENST00000533523 FAM84BQ96KN1 310 aaPredicted RBP19.8■□□□□ 0.76
CHMP4A-207ENST00000533523 IQSEC3Q9UPP2 1182 aaPredicted RBP19.8■□□□□ 0.76
CHMP4A-207ENST00000533523 TMEM39BQ9GZU3 492 aa19.79■□□□□ 0.76
CHMP4A-207ENST00000533523 MROH5Q6ZUA9 1318 aa19.78■□□□□ 0.76
CHMP4A-207ENST00000533523 FRAT2O75474 233 aaPredicted RBP19.78■□□□□ 0.76
CHMP4A-207ENST00000533523 INTS3Q68E01 1043 aaKnown RBP19.78■□□□□ 0.76
CHMP4A-207ENST00000533523 CNKSR2Q8WXI2 1034 aa19.78■□□□□ 0.76
CHMP4A-207ENST00000533523 ZNF333Q96JL9 665 aa19.78■□□□□ 0.76
CHMP4A-207ENST00000533523 BICC1Q9H694 974 aaKnown RBP19.78■□□□□ 0.76
CHMP4A-207ENST00000533523 EFCC1Q9HA90 598 aa19.78■□□□□ 0.76
CHMP4A-207ENST00000533523 E9PSI1 815 aa19.77■□□□□ 0.76
CHMP4A-207ENST00000533523 NBPF7P0C2Y1 421 aaPredicted RBP19.77■□□□□ 0.76
CHMP4A-207ENST00000533523 TNNI2P48788 182 aa19.77■□□□□ 0.76
CHMP4A-207ENST00000533523 SP3Q02447 781 aa19.77■□□□□ 0.76
CHMP4A-207ENST00000533523 VGLL4Q14135 290 aa19.77■□□□□ 0.76
CHMP4A-207ENST00000533523 METTL24Q5JXM2 366 aa19.77■□□□□ 0.76
CHMP4A-207ENST00000533523 KAZALD1Q96I82 304 aa19.77■□□□□ 0.76
CHMP4A-207ENST00000533523 TEPSINQ96N21 525 aa19.77■□□□□ 0.76
CHMP4A-207ENST00000533523 CSADQ9Y600 493 aa19.77■□□□□ 0.76
CHMP4A-207ENST00000533523 TESPA1A2RU30 521 aaPredicted RBP19.76■□□□□ 0.75
CHMP4A-207ENST00000533523 TAF1CQ15572 869 aaPredicted RBP19.76■□□□□ 0.75
CHMP4A-207ENST00000533523 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.76■□□□□ 0.75
CHMP4A-207ENST00000533523 RIPOR2Q9Y4F9 1068 aa19.76■□□□□ 0.75
CHMP4A-207ENST00000533523 CCL15-CCL14A0A0B4J2E2 113 aa19.75■□□□□ 0.75
CHMP4A-207ENST00000533523 H0YGN5 161 aa19.75■□□□□ 0.75
CHMP4A-207ENST00000533523 CACNB3P54284 484 aa19.75■□□□□ 0.75
CHMP4A-207ENST00000533523 GRIK5Q16478 980 aa19.75■□□□□ 0.75
CHMP4A-207ENST00000533523 CCL15Q16663 113 aa19.75■□□□□ 0.75
CHMP4A-207ENST00000533523 LRRC24Q50LG9 513 aa19.75■□□□□ 0.75
CHMP4A-207ENST00000533523 CAVIN4Q5BKX8 364 aa19.75■□□□□ 0.75
CHMP4A-207ENST00000533523 BRI3BPQ8WY22 251 aa19.75■□□□□ 0.75
CHMP4A-207ENST00000533523 GTF2A2P52657 109 aa19.74■□□□□ 0.75
CHMP4A-207ENST00000533523 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.74■□□□□ 0.75
CHMP4A-207ENST00000533523 TBC1D22AQ8WUA7 517 aa19.74■□□□□ 0.75
CHMP4A-207ENST00000533523 TEKT1Q969V4 418 aa19.74■□□□□ 0.75
CHMP4A-207ENST00000533523 MS4A4AQ96JQ5 239 aa19.74■□□□□ 0.75
CHMP4A-207ENST00000533523 TMOD2Q9NZR1 351 aa19.74■□□□□ 0.75
CHMP4A-207ENST00000533523 PTCH2Q9Y6C5 1203 aa19.74■□□□□ 0.75
CHMP4A-207ENST00000533523 LAMA2P24043 3122 aaKnown RBP19.74■□□□□ 0.75
CHMP4A-207ENST00000533523 UTYO14607 1347 aa19.74■□□□□ 0.75
CHMP4A-207ENST00000533523 MAP3K9P80192 1104 aa19.73■□□□□ 0.75
CHMP4A-207ENST00000533523 FBXO33Q7Z6M2 555 aa19.73■□□□□ 0.75
CHMP4A-207ENST00000533523 ANKRD44Q8N8A2 993 aa19.73■□□□□ 0.75
CHMP4A-207ENST00000533523 ZBED9Q6R2W3 1325 aa19.73■□□□□ 0.75
CHMP4A-207ENST00000533523 EYSQ5T1H1 3165 aa19.72■□□□□ 0.75
CHMP4A-207ENST00000533523 VCANP13611 3396 aa19.72■□□□□ 0.75
CHMP4A-207ENST00000533523 RABL6Q3YEC7 729 aaPredicted RBP19.72■□□□□ 0.75
CHMP4A-207ENST00000533523 SHISA4Q96DD7 197 aa19.72■□□□□ 0.75
CHMP4A-207ENST00000533523 ZFYVE28Q9HCC9 887 aa19.72■□□□□ 0.75
CHMP4A-207ENST00000533523 FAM43AQ8N2R8 423 aa19.71■□□□□ 0.75
CHMP4A-207ENST00000533523 VGLL2Q8N8G2 317 aa19.71■□□□□ 0.75
CHMP4A-207ENST00000533523 KLHDC4Q8TBB5 520 aa19.71■□□□□ 0.75
CHMP4A-207ENST00000533523 WRNIP1Q96S55 665 aa19.71■□□□□ 0.75
CHMP4A-207ENST00000533523 ARHGAP39Q9C0H5 1083 aa19.71■□□□□ 0.75
CHMP4A-207ENST00000533523 DOCK2Q92608 1830 aa19.71■□□□□ 0.75
CHMP4A-207ENST00000533523 MAST3O60307 1309 aa19.71■□□□□ 0.75
CHMP4A-207ENST00000533523 PDE8BO95263 885 aa19.7■□□□□ 0.74
CHMP4A-207ENST00000533523 BCAMP50895 628 aa19.7■□□□□ 0.74
CHMP4A-207ENST00000533523 HDLBPQ00341 1268 aaKnown RBP19.7■□□□□ 0.74
CHMP4A-207ENST00000533523 SLFN5Q08AF3 891 aa19.7■□□□□ 0.74
CHMP4A-207ENST00000533523 SLC9C1Q4G0N8 1177 aa19.7■□□□□ 0.74
CHMP4A-207ENST00000533523 SNCAIPQ9Y6H5 919 aa19.7■□□□□ 0.74
CHMP4A-207ENST00000533523 ALPK3Q96L96 1907 aa19.7■□□□□ 0.74
CHMP4A-207ENST00000533523 SPDYE5A6NIY4 337 aa19.69■□□□□ 0.74
CHMP4A-207ENST00000533523 WDHD1O75717 1129 aaPredicted RBP19.69■□□□□ 0.74
CHMP4A-207ENST00000533523 MYCP01106 439 aaPredicted RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms