RNA–Protein interactions for RNA: ENST00000532475.1

NUP98-219, Transcript of nucleoporin 98, humanhuman

TSL 4

Gene NUP98, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-219ENST00000532475 USP2O75604 605 aaPredicted RBP10.66□□□□□ -0.7
NUP98-219ENST00000532475 CCT4P50991 539 aaKnown RBP10.66□□□□□ -0.7
NUP98-219ENST00000532475 GTF2IP78347 998 aa10.66□□□□□ -0.7
NUP98-219ENST00000532475 SP3Q02447 781 aa10.66□□□□□ -0.7
NUP98-219ENST00000532475 MAP3K11Q16584 847 aa10.66□□□□□ -0.7
NUP98-219ENST00000532475 ERO1AQ96HE7 468 aa10.66□□□□□ -0.7
NUP98-219ENST00000532475 ZNF333Q96JL9 665 aa10.66□□□□□ -0.7
NUP98-219ENST00000532475 TMEM106CQ9BVX2 250 aa10.66□□□□□ -0.7
NUP98-219ENST00000532475 COA1Q9GZY4 146 aa10.66□□□□□ -0.7
NUP98-219ENST00000532475 CUL9Q8IWT3 2517 aa10.66□□□□□ -0.7
NUP98-219ENST00000532475 AOX1Q06278 1338 aa10.65□□□□□ -0.7
NUP98-219ENST00000532475 DLL1O00548 723 aa10.65□□□□□ -0.7
NUP98-219ENST00000532475 ZBTB48P10074 688 aaPredicted RBP10.65□□□□□ -0.7
NUP98-219ENST00000532475 PPP1R15BQ5SWA1 713 aa10.65□□□□□ -0.7
NUP98-219ENST00000532475 NBPF12Q5TAG4 269 aaPredicted RBP10.65□□□□□ -0.7
NUP98-219ENST00000532475 APOBEC3FQ8IUX4 373 aaKnown RBP10.65□□□□□ -0.7
NUP98-219ENST00000532475 CCDC191Q8NCU4 936 aa10.65□□□□□ -0.7
NUP98-219ENST00000532475 TTLL11Q8NHH1 800 aa10.65□□□□□ -0.7
NUP98-219ENST00000532475 POM121Q96HA1 1249 aa10.65□□□□□ -0.7
NUP98-219ENST00000532475 GREM2Q9H772 168 aa10.65□□□□□ -0.7
NUP98-219ENST00000532475 BSDC1Q9NW68 430 aaPredicted RBP10.65□□□□□ -0.7
NUP98-219ENST00000532475 MED23Q9ULK4 1368 aa10.65□□□□□ -0.71
NUP98-219ENST00000532475 SNAP23O00161 211 aa10.64□□□□□ -0.71
NUP98-219ENST00000532475 HOXB7P09629 217 aa10.64□□□□□ -0.71
NUP98-219ENST00000532475 IRF5Q13568 498 aa10.64□□□□□ -0.71
NUP98-219ENST00000532475 SH3D19Q5HYK7 790 aa10.64□□□□□ -0.71
NUP98-219ENST00000532475 CHRDL2Q6WN34 429 aa10.64□□□□□ -0.71
NUP98-219ENST00000532475 CERS5Q8N5B7 392 aa10.64□□□□□ -0.71
NUP98-219ENST00000532475 PRMT6Q96LA8 375 aaPredicted RBP10.64□□□□□ -0.71
NUP98-219ENST00000532475 CWC25Q9NXE8 425 aaPredicted RBP10.64□□□□□ -0.71
NUP98-219ENST00000532475 RBM27Q9P2N5 1060 aaKnown RBP10.64□□□□□ -0.71
NUP98-219ENST00000532475 PTCH2Q9Y6C5 1203 aa10.64□□□□□ -0.71
NUP98-219ENST00000532475 MYO3BQ8WXR4 1341 aa10.63□□□□□ -0.71
NUP98-219ENST00000532475 CLRN2A0PK11 232 aa10.63□□□□□ -0.71
NUP98-219ENST00000532475 PPP1R12BO60237 982 aaPredicted RBP10.63□□□□□ -0.71
NUP98-219ENST00000532475 HSP90B1P14625 803 aaKnown RBP10.63□□□□□ -0.71
NUP98-219ENST00000532475 CTSWP56202 376 aa10.63□□□□□ -0.71
NUP98-219ENST00000532475 GOLGA2Q08379 1002 aa10.63□□□□□ -0.71
NUP98-219ENST00000532475 LMOD3Q0VAK6 560 aa10.63□□□□□ -0.71
NUP98-219ENST00000532475 DLGAP5Q15398 846 aa10.63□□□□□ -0.71
NUP98-219ENST00000532475 SLC4A8Q2Y0W8 1093 aa10.63□□□□□ -0.71
NUP98-219ENST00000532475 SH3TC2Q8TF17 1288 aa10.63□□□□□ -0.71
NUP98-219ENST00000532475 MS4A4AQ96JQ5 239 aa10.63□□□□□ -0.71
NUP98-219ENST00000532475 CDC5LQ99459 802 aaKnown RBP10.63□□□□□ -0.71
NUP98-219ENST00000532475 METTL22Q9BUU2 404 aaPredicted RBP10.63□□□□□ -0.71
NUP98-219ENST00000532475 PLSCR2Q9NRY7 297 aa10.63□□□□□ -0.71
NUP98-219ENST00000532475 MBIPQ9NS73 344 aa10.63□□□□□ -0.71
NUP98-219ENST00000532475 SSC5DA1L4H1 1573 aa10.62□□□□□ -0.71
NUP98-219ENST00000532475 F8W031 263 aaPredicted RBP10.62□□□□□ -0.71
NUP98-219ENST00000532475 CDK11BP21127 795 aaKnown RBP10.62□□□□□ -0.71
NUP98-219ENST00000532475 SLC9C1Q4G0N8 1177 aa10.62□□□□□ -0.71
NUP98-219ENST00000532475 OTUD7BQ6GQQ9 843 aa10.62□□□□□ -0.71
NUP98-219ENST00000532475 SLC17A8Q8NDX2 589 aa10.62□□□□□ -0.71
NUP98-219ENST00000532475 LEMD3Q9Y2U8 911 aa10.62□□□□□ -0.71
NUP98-219ENST00000532475 ZNF804BA4D1E1 1349 aa10.61□□□□□ -0.71
NUP98-219ENST00000532475 IGKV5-2P06315 115 aa10.61□□□□□ -0.71
NUP98-219ENST00000532475 RASA3Q14644 834 aa10.61□□□□□ -0.71
NUP98-219ENST00000532475 SUPT20HL1Q3ZLR7 823 aa10.61□□□□□ -0.71
NUP98-219ENST00000532475 NBPF11Q86T75 865 aa10.61□□□□□ -0.71
NUP98-219ENST00000532475 CDAN1Q8IWY9 1227 aa10.61□□□□□ -0.71
NUP98-219ENST00000532475 FAM43AQ8N2R8 423 aa10.61□□□□□ -0.71
NUP98-219ENST00000532475 BRI3BPQ8WY22 251 aa10.61□□□□□ -0.71
NUP98-219ENST00000532475 OPTNQ96CV9 577 aa10.61□□□□□ -0.71
NUP98-219ENST00000532475 ARHGAP39Q9C0H5 1083 aa10.61□□□□□ -0.71
NUP98-219ENST00000532475 ELP3Q9H9T3 547 aa10.61□□□□□ -0.71
NUP98-219ENST00000532475 CD209Q9NNX6 404 aa10.61□□□□□ -0.71
NUP98-219ENST00000532475 JAG2Q9Y219 1238 aa10.61□□□□□ -0.71
NUP98-219ENST00000532475 MAP3K2Q9Y2U5 619 aa10.61□□□□□ -0.71
NUP98-219ENST00000532475 MMP14P50281 582 aa10.6□□□□□ -0.71
NUP98-219ENST00000532475 CWF19L2Q2TBE0 894 aaKnown RBP10.6□□□□□ -0.71
NUP98-219ENST00000532475 CFAP100Q494V2 611 aa10.6□□□□□ -0.71
NUP98-219ENST00000532475 ANKRD13AQ8IZ07 590 aa10.6□□□□□ -0.71
NUP98-219ENST00000532475 C8orf58Q8NAV2 365 aa10.6□□□□□ -0.71
NUP98-219ENST00000532475 MTMR14Q8NCE2 650 aa10.6□□□□□ -0.71
NUP98-219ENST00000532475 DPF3Q92784 378 aa10.6□□□□□ -0.71
NUP98-219ENST00000532475 VEZTQ9HBM0 779 aa10.6□□□□□ -0.71
NUP98-219ENST00000532475 PSME4Q14997 1843 aa10.6□□□□□ -0.71
NUP98-219ENST00000532475 PI4KAP2A4QPH2 592 aa10.59□□□□□ -0.71
NUP98-219ENST00000532475 UNCXA6NJT0 531 aa10.59□□□□□ -0.71
NUP98-219ENST00000532475 TAF5LO75529 589 aa10.59□□□□□ -0.71
NUP98-219ENST00000532475 ZNF853P0CG23 659 aa10.59□□□□□ -0.71
NUP98-219ENST00000532475 IREB2P48200 963 aaKnown RBP10.59□□□□□ -0.71
NUP98-219ENST00000532475 MTFR1Q15390 333 aa10.59□□□□□ -0.71
NUP98-219ENST00000532475 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.59□□□□□ -0.71
NUP98-219ENST00000532475 PI4KAP1Q8N8J0 262 aa10.59□□□□□ -0.71
NUP98-219ENST00000532475 HELBQ8NG08 1087 aaPredicted RBP10.59□□□□□ -0.71
NUP98-219ENST00000532475 CCL15-CCL14A0A0B4J2E2 113 aa10.58□□□□□ -0.72
NUP98-219ENST00000532475 MS4A1P11836 297 aa10.58□□□□□ -0.72
NUP98-219ENST00000532475 HIC1Q14526 733 aa10.58□□□□□ -0.72
NUP98-219ENST00000532475 TAF1CQ15572 869 aaPredicted RBP10.58□□□□□ -0.72
NUP98-219ENST00000532475 CCL15Q16663 113 aa10.58□□□□□ -0.72
NUP98-219ENST00000532475 RUNDC1Q96C34 613 aa10.58□□□□□ -0.72
NUP98-219ENST00000532475 SHISA4Q96DD7 197 aa10.58□□□□□ -0.72
NUP98-219ENST00000532475 PRO3102Q9H379 93 aa10.58□□□□□ -0.72
NUP98-219ENST00000532475 ZFYVE28Q9HCC9 887 aa10.58□□□□□ -0.72
NUP98-219ENST00000532475 PPP2R3BQ9Y5P8 575 aa10.58□□□□□ -0.72
NUP98-219ENST00000532475 IRS2Q9Y4H2 1338 aa10.58□□□□□ -0.72
NUP98-219ENST00000532475 H7C1W4 665 aa10.57□□□□□ -0.72
NUP98-219ENST00000532475 ITGA6P23229 1130 aa10.57□□□□□ -0.72
NUP98-219ENST00000532475 CTGFP29279 349 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms