RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 TFIP11Q9UBB9 837 aaKnown RBP12.9□□□□□ -0.34
PTPRK-221ENST00000532331 SPATA31A6Q5VVP1 1343 aa12.9□□□□□ -0.34
PTPRK-221ENST00000532331 PCCAP05165 728 aaPredicted RBP12.9□□□□□ -0.34
PTPRK-221ENST00000532331 CCDC93Q567U6 631 aa12.9□□□□□ -0.34
PTPRK-221ENST00000532331 KIAA0825Q8IV33 1275 aa12.9□□□□□ -0.34
PTPRK-221ENST00000532331 CENPHQ9H3R5 247 aa12.9□□□□□ -0.34
PTPRK-221ENST00000532331 RBM28Q9NW13 759 aaKnown RBP12.9□□□□□ -0.34
PTPRK-221ENST00000532331 TRIM35Q9UPQ4 493 aa12.9□□□□□ -0.34
PTPRK-221ENST00000532331 PRR36Q9H6K5 1346 aa12.9□□□□□ -0.34
PTPRK-221ENST00000532331 ANKRD62A6NC57 917 aa12.9□□□□□ -0.34
PTPRK-221ENST00000532331 KANK3Q6NY19 840 aa12.9□□□□□ -0.34
PTPRK-221ENST00000532331 TCHPQ9BT92 498 aa12.9□□□□□ -0.34
PTPRK-221ENST00000532331 AATKQ6ZMQ8 1374 aa12.9□□□□□ -0.34
PTPRK-221ENST00000532331 PPM1FP49593 454 aaPredicted RBP12.9□□□□□ -0.35
PTPRK-221ENST00000532331 PABPC4Q13310 644 aaKnown RBP eCLIP12.9□□□□□ -0.35
PTPRK-221ENST00000532331 CCDC40Q4G0X9 1142 aa12.9□□□□□ -0.35
PTPRK-221ENST00000532331 MAPKAPK5Q8IW41 473 aa12.9□□□□□ -0.35
PTPRK-221ENST00000532331 PALLDQ8WX93 1383 aa12.9□□□□□ -0.35
PTPRK-221ENST00000532331 CCDC66A2RUB6 948 aa12.89□□□□□ -0.35
PTPRK-221ENST00000532331 ZSCAN16Q9H4T2 348 aaPredicted RBP12.89□□□□□ -0.35
PTPRK-221ENST00000532331 USP37Q86T82 979 aa12.89□□□□□ -0.35
PTPRK-221ENST00000532331 TGFBRAP1Q8WUH2 860 aa12.89□□□□□ -0.35
PTPRK-221ENST00000532331 RAD50Q92878 1312 aa12.89□□□□□ -0.35
PTPRK-221ENST00000532331 ZSCAN30Q86W11 494 aa12.89□□□□□ -0.35
PTPRK-221ENST00000532331 UBXN4Q92575 508 aa12.89□□□□□ -0.35
PTPRK-221ENST00000532331 TBC1D32Q96NH3 1257 aa12.89□□□□□ -0.35
PTPRK-221ENST00000532331 TCP10L2B9ZVM9 353 aa12.89□□□□□ -0.35
PTPRK-221ENST00000532331 KIF5CO60282 957 aa12.89□□□□□ -0.35
PTPRK-221ENST00000532331 PTPN14Q15678 1187 aa12.89□□□□□ -0.35
PTPRK-221ENST00000532331 TCEANC2Q96MN5 208 aa12.89□□□□□ -0.35
PTPRK-221ENST00000532331 CLIP2Q9UDT6 1046 aa12.89□□□□□ -0.35
PTPRK-221ENST00000532331 RBM10P98175 930 aaKnown RBP12.88□□□□□ -0.35
PTPRK-221ENST00000532331 ENOX2Q16206 610 aaKnown RBP12.88□□□□□ -0.35
PTPRK-221ENST00000532331 STX1AQ16623 288 aa12.88□□□□□ -0.35
PTPRK-221ENST00000532331 ZBTB21Q9ULJ3 1066 aa12.88□□□□□ -0.35
PTPRK-221ENST00000532331 PCDHB15Q9Y5E8 787 aa12.88□□□□□ -0.35
PTPRK-221ENST00000532331 APPBP2Q92624 585 aa12.88□□□□□ -0.35
PTPRK-221ENST00000532331 PANK2Q9BZ23 570 aa12.88□□□□□ -0.35
PTPRK-221ENST00000532331 UQCRHLA0A096LP55 91 aa12.88□□□□□ -0.35
PTPRK-221ENST00000532331 YEATS4O95619 227 aa12.88□□□□□ -0.35
PTPRK-221ENST00000532331 UQCRHP07919 91 aa12.88□□□□□ -0.35
PTPRK-221ENST00000532331 NUP88Q99567 741 aaPredicted RBP12.88□□□□□ -0.35
PTPRK-221ENST00000532331 NAP1L4Q99733 375 aaKnown RBP12.88□□□□□ -0.35
PTPRK-221ENST00000532331 KIF24Q5T7B8 1368 aa12.88□□□□□ -0.35
PTPRK-221ENST00000532331 XDHP47989 1333 aa12.88□□□□□ -0.35
PTPRK-221ENST00000532331 MMP10P09238 476 aa12.88□□□□□ -0.35
PTPRK-221ENST00000532331 TAX1BP1Q86VP1 789 aa12.88□□□□□ -0.35
PTPRK-221ENST00000532331 ZKSCAN3Q9BRR0 538 aa12.88□□□□□ -0.35
PTPRK-221ENST00000532331 CLASP1Q7Z460 1538 aa12.88□□□□□ -0.35
PTPRK-221ENST00000532331 ADCY10Q96PN6 1610 aa12.88□□□□□ -0.35
PTPRK-221ENST00000532331 PTPDC1A2A3K4 754 aa12.88□□□□□ -0.35
PTPRK-221ENST00000532331 BBOX1O75936 387 aa12.88□□□□□ -0.35
PTPRK-221ENST00000532331 GBP2P32456 591 aaPredicted RBP12.88□□□□□ -0.35
PTPRK-221ENST00000532331 MTIF2P46199 727 aaKnown RBP12.88□□□□□ -0.35
PTPRK-221ENST00000532331 SLC1A4P43007 532 aa12.87□□□□□ -0.35
PTPRK-221ENST00000532331 EXOC1Q9NV70 894 aa12.87□□□□□ -0.35
PTPRK-221ENST00000532331 TNS3Q68CZ2 1445 aa12.87□□□□□ -0.35
PTPRK-221ENST00000532331 FAM193AP78312 1265 aa12.87□□□□□ -0.35
PTPRK-221ENST00000532331 CCDC102BQ68D86 513 aa12.87□□□□□ -0.35
PTPRK-221ENST00000532331 TTLL6Q8N841 843 aa12.87□□□□□ -0.35
PTPRK-221ENST00000532331 PIM2Q9P1W9 311 aa12.87□□□□□ -0.35
PTPRK-221ENST00000532331 BLMP54132 1417 aaPredicted RBP12.87□□□□□ -0.35
PTPRK-221ENST00000532331 USO1O60763 962 aaKnown RBP12.87□□□□□ -0.35
PTPRK-221ENST00000532331 SCNN1DP51172 638 aa12.87□□□□□ -0.35
PTPRK-221ENST00000532331 CHST3Q7LGC8 479 aa12.87□□□□□ -0.35
PTPRK-221ENST00000532331 CPXCR1Q8N123 301 aa12.87□□□□□ -0.35
PTPRK-221ENST00000532331 PIGBQ92521 554 aa12.87□□□□□ -0.35
PTPRK-221ENST00000532331 IGSF1Q8N6C5 1336 aa12.87□□□□□ -0.35
PTPRK-221ENST00000532331 NOP56O00567 594 aaKnown RBP12.87□□□□□ -0.35
PTPRK-221ENST00000532331 ZBTB7AO95365 584 aa12.87□□□□□ -0.35
PTPRK-221ENST00000532331 ANAPC15P60006 121 aa12.87□□□□□ -0.35
PTPRK-221ENST00000532331 FAM114A1Q8IWE2 563 aa12.87□□□□□ -0.35
PTPRK-221ENST00000532331 GBP3Q9H0R5 595 aa12.87□□□□□ -0.35
PTPRK-221ENST00000532331 SPC25Q9HBM1 224 aa12.87□□□□□ -0.35
PTPRK-221ENST00000532331 GDPD2Q9HCC8 539 aa12.87□□□□□ -0.35
PTPRK-221ENST00000532331 PHACTR2O75167 634 aa12.86□□□□□ -0.35
PTPRK-221ENST00000532331 PRKCSHP14314 528 aaPredicted RBP12.86□□□□□ -0.35
PTPRK-221ENST00000532331 CC2D2BQ6DHV5 1058 aa12.86□□□□□ -0.35
PTPRK-221ENST00000532331 APBB1IPQ7Z5R6 666 aaPredicted RBP12.86□□□□□ -0.35
PTPRK-221ENST00000532331 NECAB1Q8N987 351 aa12.86□□□□□ -0.35
PTPRK-221ENST00000532331 TNNQ9UQP3 1299 aa12.86□□□□□ -0.35
PTPRK-221ENST00000532331 KDRP35968 1356 aa12.86□□□□□ -0.35
PTPRK-221ENST00000532331 KRT2P35908 639 aa12.86□□□□□ -0.35
PTPRK-221ENST00000532331 USP8P40818 1118 aa12.86□□□□□ -0.35
PTPRK-221ENST00000532331 UBE2HP62256 183 aa12.86□□□□□ -0.35
PTPRK-221ENST00000532331 GIGYF2Q6Y7W6 1299 aaKnown RBP12.86□□□□□ -0.35
PTPRK-221ENST00000532331 GADL1Q6ZQY3 521 aa12.86□□□□□ -0.35
PTPRK-221ENST00000532331 FCHSD1Q86WN1 690 aa12.86□□□□□ -0.35
PTPRK-221ENST00000532331 PUF60Q9UHX1 559 aaKnown RBP12.86□□□□□ -0.35
PTPRK-221ENST00000532331 TDRD12Q587J7 1177 aaKnown RBP12.86□□□□□ -0.35
PTPRK-221ENST00000532331 KRT79Q5XKE5 535 aa12.86□□□□□ -0.35
PTPRK-221ENST00000532331 RTKN2Q8IZC4 609 aa12.86□□□□□ -0.35
PTPRK-221ENST00000532331 TMX3Q96JJ7 454 aa12.86□□□□□ -0.35
PTPRK-221ENST00000532331 ZBTB40Q9NUA8 1239 aa12.86□□□□□ -0.35
PTPRK-221ENST00000532331 STAT6P42226 847 aa12.86□□□□□ -0.35
PTPRK-221ENST00000532331 CHRNDQ07001 517 aa12.86□□□□□ -0.35
PTPRK-221ENST00000532331 LEMD3Q9Y2U8 911 aa12.86□□□□□ -0.35
PTPRK-221ENST00000532331 ZNF804BA4D1E1 1349 aa12.86□□□□□ -0.35
PTPRK-221ENST00000532331 BIN1O00499 593 aa12.86□□□□□ -0.35
PTPRK-221ENST00000532331 KIAA0754O94854 1291 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms