RNA–Protein interactions for RNA: ENST00000532297.5

NXF1-213, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NXF1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-213ENST00000532297 H7C1W4 665 aa17.22■□□□□ 0.35
NXF1-213ENST00000532297 ST5P78524 1137 aa17.22■□□□□ 0.35
NXF1-213ENST00000532297 ZRSR1Q15695 479 aaKnown RBP17.22■□□□□ 0.35
NXF1-213ENST00000532297 KRBA2Q6ZNG9 492 aa17.22■□□□□ 0.35
NXF1-213ENST00000532297 ADAMTSL3P82987 1691 aa17.21■□□□□ 0.35
NXF1-213ENST00000532297 POLR3DP05423 398 aaPredicted RBP17.21■□□□□ 0.35
NXF1-213ENST00000532297 ZMYM1Q5SVZ6 1142 aa17.21■□□□□ 0.35
NXF1-213ENST00000532297 NWD2Q9ULI1 1742 aa17.21■□□□□ 0.35
NXF1-213ENST00000532297 MST1RQ04912 1400 aa17.21■□□□□ 0.35
NXF1-213ENST00000532297 PDIA3P30101 505 aaKnown RBP17.21■□□□□ 0.35
NXF1-213ENST00000532297 KCNJ6P48051 423 aa17.21■□□□□ 0.35
NXF1-213ENST00000532297 WASHC4Q2M389 1173 aa17.21■□□□□ 0.35
NXF1-213ENST00000532297 SMARCE1Q969G3 411 aa17.21■□□□□ 0.35
NXF1-213ENST00000532297 ZCCHC17Q9NP64 241 aaKnown RBP17.21■□□□□ 0.35
NXF1-213ENST00000532297 RFX7Q2KHR2 1363 aa17.2■□□□□ 0.34
NXF1-213ENST00000532297 URI1O94763 535 aaPredicted RBP17.2■□□□□ 0.34
NXF1-213ENST00000532297 FDPSP14324 419 aaKnown RBP17.2■□□□□ 0.34
NXF1-213ENST00000532297 RXRAP19793 462 aa17.2■□□□□ 0.34
NXF1-213ENST00000532297 EXOSC10Q01780 885 aaKnown RBP17.2■□□□□ 0.34
NXF1-213ENST00000532297 DPCR1Q3MIW9 517 aa17.2■□□□□ 0.34
NXF1-213ENST00000532297 PHLPP2Q6ZVD8 1323 aa17.2■□□□□ 0.34
NXF1-213ENST00000532297 A0A1B0GVL5 298 aa17.2■□□□□ 0.34
NXF1-213ENST00000532297 FAM89AQ96GI7 184 aa17.2■□□□□ 0.34
NXF1-213ENST00000532297 ZNF396Q96N95 335 aaPredicted RBP17.2■□□□□ 0.34
NXF1-213ENST00000532297 NUP188Q5SRE5 1749 aa17.19■□□□□ 0.34
NXF1-213ENST00000532297 KAT6BQ8WYB5 2073 aa17.19■□□□□ 0.34
NXF1-213ENST00000532297 LMTK3Q96Q04 1460 aa17.19■□□□□ 0.34
NXF1-213ENST00000532297 OAS2P29728 719 aaKnown RBP17.19■□□□□ 0.34
NXF1-213ENST00000532297 CARD6Q9BX69 1037 aa17.19■□□□□ 0.34
NXF1-213ENST00000532297 LAMB4A4D0S4 1761 aa17.19■□□□□ 0.34
NXF1-213ENST00000532297 STRCP1A6NGW2 1772 aa17.19■□□□□ 0.34
NXF1-213ENST00000532297 EYA2O00167 538 aa17.19■□□□□ 0.34
NXF1-213ENST00000532297 HMGB1P09429 215 aaKnown RBP17.19■□□□□ 0.34
NXF1-213ENST00000532297 NAA16Q6N069 864 aaPredicted RBP17.19■□□□□ 0.34
NXF1-213ENST00000532297 CARMIL3Q8ND23 1372 aa17.19■□□□□ 0.34
NXF1-213ENST00000532297 TADA3O75528 432 aa17.18■□□□□ 0.34
NXF1-213ENST00000532297 GPS2Q13227 327 aa17.18■□□□□ 0.34
NXF1-213ENST00000532297 MUM1L1Q5H9M0 696 aa17.18■□□□□ 0.34
NXF1-213ENST00000532297 ISM2Q6H9L7 571 aa17.18■□□□□ 0.34
NXF1-213ENST00000532297 TOM1L2Q6ZVM7 507 aa17.18■□□□□ 0.34
NXF1-213ENST00000532297 AIFM3Q96NN9 605 aa17.18■□□□□ 0.34
NXF1-213ENST00000532297 CLIC4Q9Y696 253 aa17.18■□□□□ 0.34
NXF1-213ENST00000532297 BIN1O00499 593 aa17.18■□□□□ 0.34
NXF1-213ENST00000532297 RNF113AO15541 343 aaKnown RBP17.18■□□□□ 0.34
NXF1-213ENST00000532297 CCP110O43303 1012 aa17.18■□□□□ 0.34
NXF1-213ENST00000532297 FMR1NBQ8N0W7 255 aaPredicted RBP17.18■□□□□ 0.34
NXF1-213ENST00000532297 LLPHQ9BRT6 129 aaKnown RBP17.18■□□□□ 0.34
NXF1-213ENST00000532297 SRRTQ9BXP5 876 aaKnown RBP17.18■□□□□ 0.34
NXF1-213ENST00000532297 PUS7LQ9H0K6 701 aaKnown RBP17.18■□□□□ 0.34
NXF1-213ENST00000532297 EPC1Q9H2F5 836 aa17.18■□□□□ 0.34
NXF1-213ENST00000532297 STRN4Q9NRL3 753 aa17.18■□□□□ 0.34
NXF1-213ENST00000532297 PKD1L3Q7Z443 1732 aa17.18■□□□□ 0.34
NXF1-213ENST00000532297 EFCAB8A8MWE9 144 aa17.17■□□□□ 0.34
NXF1-213ENST00000532297 SASH3O75995 380 aa17.17■□□□□ 0.34
NXF1-213ENST00000532297 ZAP70P43403 619 aa17.17■□□□□ 0.34
NXF1-213ENST00000532297 TNNT3P45378 269 aaPredicted RBP17.17■□□□□ 0.34
NXF1-213ENST00000532297 MRPS27Q92552 414 aaKnown RBP17.17■□□□□ 0.34
NXF1-213ENST00000532297 TPM1P09493 284 aa17.17■□□□□ 0.34
NXF1-213ENST00000532297 GPTP24298 496 aa17.17■□□□□ 0.34
NXF1-213ENST00000532297 EVCP57679 992 aa17.17■□□□□ 0.34
NXF1-213ENST00000532297 DHX8Q14562 1220 aaKnown RBP17.17■□□□□ 0.34
NXF1-213ENST00000532297 CCDC158Q5M9N0 1113 aa17.17■□□□□ 0.34
NXF1-213ENST00000532297 CCDC34Q96HJ3 373 aa17.17■□□□□ 0.34
NXF1-213ENST00000532297 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.17■□□□□ 0.341e-6■■□□□ 13.7
NXF1-213ENST00000532297 KIAA1468Q9P260 1216 aa17.17■□□□□ 0.34
NXF1-213ENST00000532297 MYO5AQ9Y4I1 1855 aaKnown RBP17.17■□□□□ 0.34
NXF1-213ENST00000532297 SALL1Q9NSC2 1324 aa17.17■□□□□ 0.34
NXF1-213ENST00000532297 ATP8B1O43520 1251 aa17.17■□□□□ 0.34
NXF1-213ENST00000532297 TBC1D8O95759 1140 aa17.17■□□□□ 0.34
NXF1-213ENST00000532297 SMC1AQ14683 1233 aaKnown RBP17.17■□□□□ 0.34
NXF1-213ENST00000532297 PTPN21Q16825 1174 aa17.17■□□□□ 0.34
NXF1-213ENST00000532297 TRIM65Q6PJ69 517 aa17.17■□□□□ 0.34
NXF1-213ENST00000532297 UBXN6Q9BZV1 441 aa17.17■□□□□ 0.34
NXF1-213ENST00000532297 PCDHA7Q9UN72 937 aa17.17■□□□□ 0.34
NXF1-213ENST00000532297 KIF28PB7ZC32 967 aa17.16■□□□□ 0.34
NXF1-213ENST00000532297 UBE2Q2LH0YL09 131 aa17.16■□□□□ 0.34
NXF1-213ENST00000532297 ZSCAN26Q16670 478 aa17.16■□□□□ 0.34
NXF1-213ENST00000532297 LRRFIP1Q32MZ4 808 aaKnown RBP17.16■□□□□ 0.34
NXF1-213ENST00000532297 XAGE2Q96GT9 111 aa17.16■□□□□ 0.34
NXF1-213ENST00000532297 DSCC1Q9BVC3 393 aa17.16■□□□□ 0.34
NXF1-213ENST00000532297 HELLSQ9NRZ9 838 aa17.16■□□□□ 0.34
NXF1-213ENST00000532297 FANCGO15287 622 aa17.16■□□□□ 0.34
NXF1-213ENST00000532297 IL15P40933 162 aaPredicted RBP17.16■□□□□ 0.34
NXF1-213ENST00000532297 NDUFA8P51970 172 aa17.16■□□□□ 0.34
NXF1-213ENST00000532297 TTC39AQ5SRH9 613 aa17.16■□□□□ 0.34
NXF1-213ENST00000532297 ATL3Q6DD88 541 aa17.16■□□□□ 0.34
NXF1-213ENST00000532297 BPIFA3Q9BQP9 254 aa17.16■□□□□ 0.34
NXF1-213ENST00000532297 RASSF4Q9H2L5 321 aa17.16■□□□□ 0.34
NXF1-213ENST00000532297 INCENPQ9NQS7 918 aa17.16■□□□□ 0.34
NXF1-213ENST00000532297 KLF18A0A0U1RQI7 1052 aa17.15■□□□□ 0.34
NXF1-213ENST00000532297 CC2D1AQ6P1N0 951 aaPredicted RBP17.15■□□□□ 0.34
NXF1-213ENST00000532297 CCDC191Q8NCU4 936 aa17.15■□□□□ 0.34
NXF1-213ENST00000532297 SENP2Q9HC62 589 aa17.15■□□□□ 0.34
NXF1-213ENST00000532297 GOLGA8BA8MQT2 603 aa17.15■□□□□ 0.34
NXF1-213ENST00000532297 LMOD1P29536 600 aaPredicted RBP17.15■□□□□ 0.34
NXF1-213ENST00000532297 ANTXR2P58335 489 aa17.15■□□□□ 0.34
NXF1-213ENST00000532297 FAM177A1Q8N128 213 aaPredicted RBP17.15■□□□□ 0.34
NXF1-213ENST00000532297 DNAJC5Q9H3Z4 198 aa17.15■□□□□ 0.34
NXF1-213ENST00000532297 PRDM11Q9NQV5 511 aa17.15■□□□□ 0.34
NXF1-213ENST00000532297 PARP3Q9Y6F1 533 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms