RNA–Protein interactions for RNA: ENST00000532257.1

GEN1-205, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

TSL 4

Gene GEN1, Length 498 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-205ENST00000532257 CC2D1BQ5T0F9 858 aaKnown RBP13.24□□□□□ -0.29
GEN1-205ENST00000532257 COA1Q9GZY4 146 aa13.24□□□□□ -0.29
GEN1-205ENST00000532257 CSADQ9Y600 493 aa13.24□□□□□ -0.29
GEN1-205ENST00000532257 ARAP2Q8WZ64 1704 aa13.24□□□□□ -0.29
GEN1-205ENST00000532257 ATP5J2-PTCD1G3V325 749 aa13.23□□□□□ -0.29
GEN1-205ENST00000532257 FCGRTP55899 365 aa13.23□□□□□ -0.29
GEN1-205ENST00000532257 CNGB1Q14028 1251 aaPredicted RBP13.23□□□□□ -0.29
GEN1-205ENST00000532257 CDAN1Q8IWY9 1227 aa13.23□□□□□ -0.29
GEN1-205ENST00000532257 MTMR14Q8NCE2 650 aa13.23□□□□□ -0.29
GEN1-205ENST00000532257 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.23□□□□□ -0.29
GEN1-205ENST00000532257 SEMA6BQ9H3T3 888 aa13.23□□□□□ -0.29
GEN1-205ENST00000532257 SPDYE2BA6NHP3 402 aa13.22□□□□□ -0.29
GEN1-205ENST00000532257 SPDYE5A6NIY4 337 aa13.22□□□□□ -0.29
GEN1-205ENST00000532257 SPDYE6P0CI01 402 aa13.22□□□□□ -0.29
GEN1-205ENST00000532257 GTF2IP78347 998 aa13.22□□□□□ -0.29
GEN1-205ENST00000532257 SNAPC2Q13487 334 aa13.22□□□□□ -0.29
GEN1-205ENST00000532257 TXNRD3Q86VQ6 643 aa13.22□□□□□ -0.29
GEN1-205ENST00000532257 ANKLE1Q8NAG6 615 aa13.22□□□□□ -0.29
GEN1-205ENST00000532257 USP38Q8NB14 1042 aa13.22□□□□□ -0.29
GEN1-205ENST00000532257 CCDC85AQ96PX6 553 aaPredicted RBP13.22□□□□□ -0.29
GEN1-205ENST00000532257 ISCA1Q9BUE6 129 aa13.22□□□□□ -0.29
GEN1-205ENST00000532257 NBPF3Q9H094 633 aa13.22□□□□□ -0.29
GEN1-205ENST00000532257 C11orf49Q9H6J7 331 aa13.22□□□□□ -0.29
GEN1-205ENST00000532257 PIEZO1Q92508 2521 aa13.21□□□□□ -0.29
GEN1-205ENST00000532257 IRF6O14896 467 aa13.21□□□□□ -0.29
GEN1-205ENST00000532257 MAP3K9P80192 1104 aa13.21□□□□□ -0.29
GEN1-205ENST00000532257 CFAP100Q494V2 611 aa13.21□□□□□ -0.29
GEN1-205ENST00000532257 ANKRD18AQ8IVF6 992 aa13.21□□□□□ -0.29
GEN1-205ENST00000532257 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.21□□□□□ -0.29
GEN1-205ENST00000532257 SNCAIPQ9Y6H5 919 aa13.21□□□□□ -0.29
GEN1-205ENST00000532257 F8W031 263 aaPredicted RBP13.2□□□□□ -0.3
GEN1-205ENST00000532257 FLT3LGP49771 235 aa13.2□□□□□ -0.3
GEN1-205ENST00000532257 CCDC152Q4G0S7 254 aa13.2□□□□□ -0.3
GEN1-205ENST00000532257 CERS5Q8N5B7 392 aa13.2□□□□□ -0.3
GEN1-205ENST00000532257 PXYLP1Q8TE99 480 aa13.2□□□□□ -0.3
GEN1-205ENST00000532257 PRMT6Q96LA8 375 aaPredicted RBP13.2□□□□□ -0.3
GEN1-205ENST00000532257 TTYH1Q9H313 450 aaPredicted RBP13.2□□□□□ -0.3
GEN1-205ENST00000532257 HCN4Q9Y3Q4 1203 aa13.2□□□□□ -0.3
GEN1-205ENST00000532257 ARIH1Q9Y4X5 557 aaPredicted RBP13.2□□□□□ -0.3
GEN1-205ENST00000532257 NCOR1O75376 2440 aa13.2□□□□□ -0.3
GEN1-205ENST00000532257 PDHXO00330 501 aa13.19□□□□□ -0.3
GEN1-205ENST00000532257 U2AF1L5P0DN76 240 aaPredicted RBP13.19□□□□□ -0.3
GEN1-205ENST00000532257 U2AF1Q01081 240 aaKnown RBP eCLIP13.19□□□□□ -0.3
GEN1-205ENST00000532257 PFASO15067 1338 aa13.18□□□□□ -0.3
GEN1-205ENST00000532257 ATXN8OSP0DMR3 200 aa13.18□□□□□ -0.3
GEN1-205ENST00000532257 BCRP11274 1271 aa13.18□□□□□ -0.3
GEN1-205ENST00000532257 KLRK1P26718 216 aa13.18□□□□□ -0.3
GEN1-205ENST00000532257 CCT4P50991 539 aaKnown RBP13.18□□□□□ -0.3
GEN1-205ENST00000532257 TNFAIP1Q13829 316 aa13.18□□□□□ -0.3
GEN1-205ENST00000532257 ERO1BQ86YB8 467 aa13.18□□□□□ -0.3
GEN1-205ENST00000532257 ADAMTS19Q8TE59 1207 aa13.18□□□□□ -0.3
GEN1-205ENST00000532257 TEPSINQ96N21 525 aa13.18□□□□□ -0.3
GEN1-205ENST00000532257 TAOK2Q9UL54 1235 aa13.18□□□□□ -0.3
GEN1-205ENST00000532257 BDP1A6H8Y1 2624 aa13.17□□□□□ -0.3
GEN1-205ENST00000532257 PPIL2Q13356 520 aa13.17□□□□□ -0.3
GEN1-205ENST00000532257 ANKRD23Q86SG2 305 aa13.17□□□□□ -0.3
GEN1-205ENST00000532257 ALYREFQ86V81 257 aaKnown RBP13.17□□□□□ -0.3
GEN1-205ENST00000532257 PLBD2Q8NHP8 589 aa13.17□□□□□ -0.3
GEN1-205ENST00000532257 DOCK3Q8IZD9 2030 aa13.17□□□□□ -0.3
GEN1-205ENST00000532257 IRF5Q13568 498 aa13.16□□□□□ -0.3
GEN1-205ENST00000532257 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.16□□□□□ -0.3
GEN1-205ENST00000532257 UHRF1Q96T88 793 aaPredicted RBP13.16□□□□□ -0.3
GEN1-205ENST00000532257 C1QTNF1Q9BXJ1 281 aa13.16□□□□□ -0.3
GEN1-205ENST00000532257 PCGF6Q9BYE7 350 aa13.16□□□□□ -0.3
GEN1-205ENST00000532257 TMEM39BQ9GZU3 492 aa13.16□□□□□ -0.3
GEN1-205ENST00000532257 MINPP1Q9UNW1 487 aa13.16□□□□□ -0.3
GEN1-205ENST00000532257 MAST2Q6P0Q8 1798 aa13.16□□□□□ -0.3
GEN1-205ENST00000532257 LTBP2Q14767 1821 aa13.16□□□□□ -0.3
GEN1-205ENST00000532257 CACNA1AO00555 2505 aa13.15□□□□□ -0.3
GEN1-205ENST00000532257 RBM5P52756 815 aaKnown RBP eCLIP13.15□□□□□ -0.3
GEN1-205ENST00000532257 TRIM26Q12899 539 aaPredicted RBP13.15□□□□□ -0.3
GEN1-205ENST00000532257 ZBTB38Q8NAP3 1195 aaPredicted RBP13.15□□□□□ -0.3
GEN1-205ENST00000532257 ZKSCAN4Q969J2 545 aaPredicted RBP13.15□□□□□ -0.3
GEN1-205ENST00000532257 WRNIP1Q96S55 665 aa13.15□□□□□ -0.3
GEN1-205ENST00000532257 TSPYL4Q9UJ04 414 aa13.15□□□□□ -0.3
GEN1-205ENST00000532257 NUDCQ9Y266 331 aa13.15□□□□□ -0.3
GEN1-205ENST00000532257 CLSPNQ9HAW4 1339 aa13.14□□□□□ -0.31
GEN1-205ENST00000532257 TNPO2O14787 897 aaKnown RBP13.14□□□□□ -0.31
GEN1-205ENST00000532257 LRRC26Q2I0M4 334 aa13.14□□□□□ -0.31
GEN1-205ENST00000532257 SPDYE2Q495Y8 402 aa13.14□□□□□ -0.31
GEN1-205ENST00000532257 CFAP53Q96M91 514 aa13.14□□□□□ -0.31
GEN1-205ENST00000532257 PARK7Q99497 189 aaKnown RBP13.14□□□□□ -0.31
GEN1-205ENST00000532257 LBHD1Q9BQE6 289 aaPredicted RBP13.14□□□□□ -0.31
GEN1-205ENST00000532257 ZNF70Q9UC06 446 aaPredicted RBP13.14□□□□□ -0.31
GEN1-205ENST00000532257 XIRP2A4UGR9 3374 aa13.13□□□□□ -0.31
GEN1-205ENST00000532257 TCP10L2B9ZVM9 353 aa13.13□□□□□ -0.31
GEN1-205ENST00000532257 PER1O15534 1290 aaPredicted RBP13.13□□□□□ -0.31
GEN1-205ENST00000532257 PDE8AO60658 829 aa13.13□□□□□ -0.31
GEN1-205ENST00000532257 CYP2C8P10632 490 aa13.13□□□□□ -0.31
GEN1-205ENST00000532257 HSP90B1P14625 803 aaKnown RBP13.13□□□□□ -0.31
GEN1-205ENST00000532257 CDC5LQ99459 802 aaKnown RBP13.13□□□□□ -0.31
GEN1-205ENST00000532257 BSDC1Q9NW68 430 aaPredicted RBP13.13□□□□□ -0.31
GEN1-205ENST00000532257 MUC6Q6W4X9 2439 aa13.13□□□□□ -0.31
GEN1-205ENST00000532257 MYH3P11055 1940 aa13.13□□□□□ -0.31
GEN1-205ENST00000532257 TRIM28Q13263 835 aaKnown RBP13.12□□□□□ -0.31
GEN1-205ENST00000532257 MOGSQ13724 837 aa13.12□□□□□ -0.31
GEN1-205ENST00000532257 ATXN2LQ8WWM7 1075 aaKnown RBP13.12□□□□□ -0.31
GEN1-205ENST00000532257 ASB2Q96Q27 587 aa13.12□□□□□ -0.31
GEN1-205ENST00000532257 TDRD3Q9H7E2 651 aaKnown RBP13.12□□□□□ -0.31
GEN1-205ENST00000532257 CD209Q9NNX6 404 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms