RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 CSF1RP07333 972 aa7.24□□□□□ -1.25
HMGB1P42-201ENST00000532126 NBPF7P0C2Y1 421 aaPredicted RBP7.24□□□□□ -1.25
HMGB1P42-201ENST00000532126 ITGA6P23229 1130 aa7.24□□□□□ -1.25
HMGB1P42-201ENST00000532126 IGHMBP2P38935 993 aaKnown RBP7.24□□□□□ -1.25
HMGB1P42-201ENST00000532126 CCT4P50991 539 aaKnown RBP7.24□□□□□ -1.25
HMGB1P42-201ENST00000532126 GPSM2P81274 684 aa7.24□□□□□ -1.25
HMGB1P42-201ENST00000532126 FOXO4P98177 505 aa7.24□□□□□ -1.25
HMGB1P42-201ENST00000532126 LARGE2Q8N3Y3 721 aa7.24□□□□□ -1.25
HMGB1P42-201ENST00000532126 PNMA1Q8ND90 353 aa7.24□□□□□ -1.25
HMGB1P42-201ENST00000532126 ARHGAP45Q92619 1136 aa7.24□□□□□ -1.25
HMGB1P42-201ENST00000532126 FRAT1Q92837 279 aaPredicted RBP7.24□□□□□ -1.25
HMGB1P42-201ENST00000532126 RTFDC1Q9BY42 306 aaPredicted RBP7.24□□□□□ -1.25
HMGB1P42-201ENST00000532126 VPS33BQ9H267 617 aa7.24□□□□□ -1.25
HMGB1P42-201ENST00000532126 CWC22Q9HCG8 908 aaKnown RBP7.24□□□□□ -1.25
HMGB1P42-201ENST00000532126 ANKIB1Q9P2G1 1089 aa7.24□□□□□ -1.25
HMGB1P42-201ENST00000532126 CHMP3Q9Y3E7 222 aa7.24□□□□□ -1.25
HMGB1P42-201ENST00000532126 SNED1Q8TER0 1413 aa7.24□□□□□ -1.25
HMGB1P42-201ENST00000532126 DDX60Q8IY21 1712 aaKnown RBP7.24□□□□□ -1.25
HMGB1P42-201ENST00000532126 ANKRD18BA2A2Z9 1011 aa7.23□□□□□ -1.25
HMGB1P42-201ENST00000532126 ANKRD62A6NC57 917 aa7.23□□□□□ -1.25
HMGB1P42-201ENST00000532126 SOWAHDA6NJG2 315 aa7.23□□□□□ -1.25
HMGB1P42-201ENST00000532126 C6orf229H3BNL8 230 aa7.23□□□□□ -1.25
HMGB1P42-201ENST00000532126 IFIT5Q13325 482 aaKnown RBP7.23□□□□□ -1.25
HMGB1P42-201ENST00000532126 AOC3Q16853 763 aa7.23□□□□□ -1.25
HMGB1P42-201ENST00000532126 CCDC57Q2TAC2 916 aa7.23□□□□□ -1.25
HMGB1P42-201ENST00000532126 LMBR1LQ6UX01 489 aa7.23□□□□□ -1.25
HMGB1P42-201ENST00000532126 NIM1KQ8IY84 436 aa7.23□□□□□ -1.25
HMGB1P42-201ENST00000532126 UCN2Q96RP3 112 aa7.23□□□□□ -1.25
HMGB1P42-201ENST00000532126 MPHOSPH8Q99549 860 aa7.23□□□□□ -1.25
HMGB1P42-201ENST00000532126 NMRK2Q9NPI5 230 aa7.23□□□□□ -1.25
HMGB1P42-201ENST00000532126 UTYO14607 1347 aa7.23□□□□□ -1.25
HMGB1P42-201ENST00000532126 FZD9O00144 591 aa7.22□□□□□ -1.25
HMGB1P42-201ENST00000532126 ATP9BO43861 1147 aa7.22□□□□□ -1.25
HMGB1P42-201ENST00000532126 DDNO94850 711 aaPredicted RBP7.22□□□□□ -1.25
HMGB1P42-201ENST00000532126 UFL1O94874 794 aa7.22□□□□□ -1.25
HMGB1P42-201ENST00000532126 NUDT7P0C024 238 aa7.22□□□□□ -1.25
HMGB1P42-201ENST00000532126 VEGFAP15692 232 aaPredicted RBP7.22□□□□□ -1.25
HMGB1P42-201ENST00000532126 NDUFV2P19404 249 aa7.22□□□□□ -1.25
HMGB1P42-201ENST00000532126 EIF6P56537 245 aaKnown RBP7.22□□□□□ -1.25
HMGB1P42-201ENST00000532126 KIAA2012Q0VF49 1180 aa7.22□□□□□ -1.25
HMGB1P42-201ENST00000532126 QPCTQ16769 361 aa7.22□□□□□ -1.25
HMGB1P42-201ENST00000532126 NAALADL2Q58DX5 795 aa7.22□□□□□ -1.25
HMGB1P42-201ENST00000532126 TAF7LQ5H9L4 462 aa7.22□□□□□ -1.25
HMGB1P42-201ENST00000532126 EPHA10Q5JZY3 1008 aa7.22□□□□□ -1.25
HMGB1P42-201ENST00000532126 ZKSCAN2Q63HK3 967 aa7.22□□□□□ -1.25
HMGB1P42-201ENST00000532126 ATF7IPQ6VMQ6 1270 aa7.22□□□□□ -1.25
HMGB1P42-201ENST00000532126 C16orf71Q8IYS4 520 aaPredicted RBP7.22□□□□□ -1.25
HMGB1P42-201ENST00000532126 TBC1D16Q8TBP0 767 aa7.22□□□□□ -1.25
HMGB1P42-201ENST00000532126 SUCLG2Q96I99 432 aa7.22□□□□□ -1.25
HMGB1P42-201ENST00000532126 EYA3Q99504 573 aa7.22□□□□□ -1.25
HMGB1P42-201ENST00000532126 USP44Q9H0E7 712 aa7.22□□□□□ -1.25
HMGB1P42-201ENST00000532126 RRAGCQ9HB90 399 aa7.22□□□□□ -1.25
HMGB1P42-201ENST00000532126 BSDC1Q9NW68 430 aaPredicted RBP7.22□□□□□ -1.25
HMGB1P42-201ENST00000532126 POLLQ9UGP5 575 aa7.22□□□□□ -1.25
HMGB1P42-201ENST00000532126 GGA1Q9UJY5 639 aa7.22□□□□□ -1.25
HMGB1P42-201ENST00000532126 ZNRF3Q9ULT6 936 aa7.22□□□□□ -1.25
HMGB1P42-201ENST00000532126 MINPP1Q9UNW1 487 aa7.22□□□□□ -1.25
HMGB1P42-201ENST00000532126 LAMB2P55268 1798 aa7.22□□□□□ -1.25
HMGB1P42-201ENST00000532126 CACNA1FO60840 1977 aa7.22□□□□□ -1.25
HMGB1P42-201ENST00000532126 XDHP47989 1333 aa7.22□□□□□ -1.25
HMGB1P42-201ENST00000532126 ZNF541Q9H0D2 1346 aa7.22□□□□□ -1.25
HMGB1P42-201ENST00000532126 CACNA1SQ13698 1873 aa7.21□□□□□ -1.25
HMGB1P42-201ENST00000532126 FER1L6Q2WGJ9 1857 aa7.21□□□□□ -1.25
HMGB1P42-201ENST00000532126 RIMBP2O15034 1052 aa7.21□□□□□ -1.26
HMGB1P42-201ENST00000532126 UBTFL1P0CB47 393 aaPredicted RBP7.21□□□□□ -1.26
HMGB1P42-201ENST00000532126 TRIM27P14373 513 aa7.21□□□□□ -1.26
HMGB1P42-201ENST00000532126 ATP2B4P23634 1241 aa7.21□□□□□ -1.26
HMGB1P42-201ENST00000532126 DNAJB2P25686 324 aa7.21□□□□□ -1.26
HMGB1P42-201ENST00000532126 INTS3Q68E01 1043 aaKnown RBP7.21□□□□□ -1.26
HMGB1P42-201ENST00000532126 GPC2Q8N158 579 aa7.21□□□□□ -1.26
HMGB1P42-201ENST00000532126 KAZALD1Q96I82 304 aa7.21□□□□□ -1.26
HMGB1P42-201ENST00000532126 ZC3H12CQ9C0D7 883 aaKnown RBP7.21□□□□□ -1.26
HMGB1P42-201ENST00000532126 ANKRD2Q9GZV1 360 aa7.21□□□□□ -1.26
HMGB1P42-201ENST00000532126 BICC1Q9H694 974 aaKnown RBP7.21□□□□□ -1.26
HMGB1P42-201ENST00000532126 FAM198AQ9UFP1 575 aa7.21□□□□□ -1.26
HMGB1P42-201ENST00000532126 HDAC5Q9UQL6 1122 aa7.21□□□□□ -1.26
HMGB1P42-201ENST00000532126 GJA3Q9Y6H8 435 aa7.21□□□□□ -1.26
HMGB1P42-201ENST00000532126 COL4A1P02462 1669 aa7.21□□□□□ -1.26
HMGB1P42-201ENST00000532126 IQCA1LA6NCM1 817 aa7.2□□□□□ -1.26
HMGB1P42-201ENST00000532126 TOMM70O94826 608 aa7.2□□□□□ -1.26
HMGB1P42-201ENST00000532126 C1QTNF8P60827 252 aa7.2□□□□□ -1.26
HMGB1P42-201ENST00000532126 RABL6Q3YEC7 729 aaPredicted RBP7.2□□□□□ -1.26
HMGB1P42-201ENST00000532126 TMEM164Q5U3C3 297 aa7.2□□□□□ -1.26
HMGB1P42-201ENST00000532126 LDHAL6AQ6ZMR3 332 aa7.2□□□□□ -1.26
HMGB1P42-201ENST00000532126 NUDT18Q6ZVK8 323 aa7.2□□□□□ -1.26
HMGB1P42-201ENST00000532126 FTSJ3Q8IY81 847 aaKnown RBP7.2□□□□□ -1.26
HMGB1P42-201ENST00000532126 ANKRD44Q8N8A2 993 aa7.2□□□□□ -1.26
HMGB1P42-201ENST00000532126 GPR101Q96P66 508 aaPredicted RBP7.2□□□□□ -1.26
HMGB1P42-201ENST00000532126 BIN2Q9UBW5 565 aaPredicted RBP7.2□□□□□ -1.26
HMGB1P42-201ENST00000532126 PCDHB15Q9Y5E8 787 aa7.2□□□□□ -1.26
HMGB1P42-201ENST00000532126 SBF1O95248 1867 aa7.19□□□□□ -1.26
HMGB1P42-201ENST00000532126 COL4A5P29400 1685 aa7.19□□□□□ -1.26
HMGB1P42-201ENST00000532126 TIAM2Q8IVF5 1701 aa7.19□□□□□ -1.26
HMGB1P42-201ENST00000532126 ANKRD33BA6NCL7 494 aa7.19□□□□□ -1.26
HMGB1P42-201ENST00000532126 POTECB2RU33 542 aa7.19□□□□□ -1.26
HMGB1P42-201ENST00000532126 RAD17O75943 681 aa7.19□□□□□ -1.26
HMGB1P42-201ENST00000532126 GNAI3P08754 354 aa7.19□□□□□ -1.26
HMGB1P42-201ENST00000532126 KCNJ4P48050 445 aa7.19□□□□□ -1.26
HMGB1P42-201ENST00000532126 CHRNDQ07001 517 aa7.19□□□□□ -1.26
HMGB1P42-201ENST00000532126 CXCL9Q07325 125 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms