RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 TDRD7Q8NHU6 1098 aaKnown RBP11.71□□□□□ -0.53
CHMP4A-205ENST00000531158 ARMC5Q96C12 935 aa11.71□□□□□ -0.53
CHMP4A-205ENST00000531158 COL25A1Q9BXS0 654 aaPredicted RBP11.71□□□□□ -0.53
CHMP4A-205ENST00000531158 ELP3Q9H9T3 547 aa11.71□□□□□ -0.53
CHMP4A-205ENST00000531158 ZNF70Q9UC06 446 aaPredicted RBP11.71□□□□□ -0.53
CHMP4A-205ENST00000531158 PTPRFP10586 1907 aa11.7□□□□□ -0.54
CHMP4A-205ENST00000531158 UNCXA6NJT0 531 aa11.7□□□□□ -0.54
CHMP4A-205ENST00000531158 PLIN1O60240 522 aa11.7□□□□□ -0.54
CHMP4A-205ENST00000531158 SUPT20HL1Q3ZLR7 823 aa11.7□□□□□ -0.54
CHMP4A-205ENST00000531158 ANKRD13AQ8IZ07 590 aa11.7□□□□□ -0.54
CHMP4A-205ENST00000531158 BRI3BPQ8WY22 251 aa11.7□□□□□ -0.54
CHMP4A-205ENST00000531158 OPTNQ96CV9 577 aa11.7□□□□□ -0.54
CHMP4A-205ENST00000531158 FAM84BQ96KN1 310 aaPredicted RBP11.7□□□□□ -0.54
CHMP4A-205ENST00000531158 PUS3Q9BZE2 481 aaKnown RBP11.7□□□□□ -0.54
CHMP4A-205ENST00000531158 TDRD3Q9H7E2 651 aaKnown RBP11.7□□□□□ -0.54
CHMP4A-205ENST00000531158 CHMP3Q9Y3E7 222 aa11.7□□□□□ -0.54
CHMP4A-205ENST00000531158 GTF3C3Q9Y5Q9 886 aa11.7□□□□□ -0.54
CHMP4A-205ENST00000531158 AK9Q5TCS8 1911 aa11.7□□□□□ -0.54
CHMP4A-205ENST00000531158 GRM8O00222 908 aa11.69□□□□□ -0.54
CHMP4A-205ENST00000531158 MYO1BO43795 1136 aa11.69□□□□□ -0.54
CHMP4A-205ENST00000531158 IREB2P48200 963 aaKnown RBP11.69□□□□□ -0.54
CHMP4A-205ENST00000531158 VGLL4Q14135 290 aa11.69□□□□□ -0.54
CHMP4A-205ENST00000531158 MFSD14BQ5SR56 506 aa11.69□□□□□ -0.54
CHMP4A-205ENST00000531158 LDHAL6AQ6ZMR3 332 aa11.69□□□□□ -0.54
CHMP4A-205ENST00000531158 ERO1AQ96HE7 468 aa11.69□□□□□ -0.54
CHMP4A-205ENST00000531158 TMEM39BQ9GZU3 492 aa11.69□□□□□ -0.54
CHMP4A-205ENST00000531158 TTF2Q9UNY4 1162 aaKnown RBP11.69□□□□□ -0.54
CHMP4A-205ENST00000531158 DOCK2Q92608 1830 aa11.69□□□□□ -0.54
CHMP4A-205ENST00000531158 PHIPQ8WWQ0 1821 aa11.68□□□□□ -0.54
CHMP4A-205ENST00000531158 RBM5P52756 815 aaKnown RBP eCLIP11.68□□□□□ -0.54
CHMP4A-205ENST00000531158 SP3Q02447 781 aa11.68□□□□□ -0.54
CHMP4A-205ENST00000531158 NCBP3Q53F19 620 aaKnown RBP11.68□□□□□ -0.54
CHMP4A-205ENST00000531158 DZIP1LQ8IYY4 767 aaKnown RBP11.68□□□□□ -0.54
CHMP4A-205ENST00000531158 FAM43AQ8N2R8 423 aa11.68□□□□□ -0.54
CHMP4A-205ENST00000531158 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.68□□□□□ -0.54
CHMP4A-205ENST00000531158 DPF3Q92784 378 aa11.68□□□□□ -0.54
CHMP4A-205ENST00000531158 SERPINA10Q9UK55 444 aa11.68□□□□□ -0.54
CHMP4A-205ENST00000531158 TCP10L2B9ZVM9 353 aa11.67□□□□□ -0.54
CHMP4A-205ENST00000531158 NBPF7P0C2Y1 421 aaPredicted RBP11.67□□□□□ -0.54
CHMP4A-205ENST00000531158 CRKP46108 304 aa11.67□□□□□ -0.54
CHMP4A-205ENST00000531158 CACNB3P54284 484 aa11.67□□□□□ -0.54
CHMP4A-205ENST00000531158 SUCLG2Q96I99 432 aa11.67□□□□□ -0.54
CHMP4A-205ENST00000531158 ZNF333Q96JL9 665 aa11.67□□□□□ -0.54
CHMP4A-205ENST00000531158 ARHGAP39Q9C0H5 1083 aa11.67□□□□□ -0.54
CHMP4A-205ENST00000531158 EFCC1Q9HA90 598 aa11.67□□□□□ -0.54
CHMP4A-205ENST00000531158 CNNM1Q9NRU3 951 aa11.67□□□□□ -0.54
CHMP4A-205ENST00000531158 IQSEC3Q9UPP2 1182 aaPredicted RBP11.67□□□□□ -0.54
CHMP4A-205ENST00000531158 SALL2Q9Y467 1007 aaPredicted RBP11.67□□□□□ -0.54
CHMP4A-205ENST00000531158 PTCH2Q9Y6C5 1203 aa11.67□□□□□ -0.54
CHMP4A-205ENST00000531158 LAMA3Q16787 3333 aa11.67□□□□□ -0.54
CHMP4A-205ENST00000531158 CCL15-CCL14A0A0B4J2E2 113 aa11.66□□□□□ -0.54
CHMP4A-205ENST00000531158 HIBADHP31937 336 aaKnown RBP11.66□□□□□ -0.54
CHMP4A-205ENST00000531158 CCL15Q16663 113 aa11.66□□□□□ -0.54
CHMP4A-205ENST00000531158 CCDC57Q2TAC2 916 aa11.66□□□□□ -0.54
CHMP4A-205ENST00000531158 SLC4A8Q2Y0W8 1093 aa11.66□□□□□ -0.54
CHMP4A-205ENST00000531158 VGLL2Q8N8G2 317 aa11.66□□□□□ -0.54
CHMP4A-205ENST00000531158 LRCH3Q96II8 777 aa11.66□□□□□ -0.54
CHMP4A-205ENST00000531158 YTHDC1Q96MU7 727 aaKnown RBP11.66□□□□□ -0.54
CHMP4A-205ENST00000531158 RIPOR2Q9Y4F9 1068 aa11.66□□□□□ -0.54
CHMP4A-205ENST00000531158 SNCAIPQ9Y6H5 919 aa11.66□□□□□ -0.54
CHMP4A-205ENST00000531158 ALPK3Q96L96 1907 aa11.66□□□□□ -0.54
CHMP4A-205ENST00000531158 MYH2Q9UKX2 1941 aa11.66□□□□□ -0.54
CHMP4A-205ENST00000531158 DOCK3Q8IZD9 2030 aa11.65□□□□□ -0.54
CHMP4A-205ENST00000531158 SPDYE5A6NIY4 337 aa11.65□□□□□ -0.54
CHMP4A-205ENST00000531158 SOX1O00570 391 aaPredicted RBP11.65□□□□□ -0.54
CHMP4A-205ENST00000531158 CTGFP29279 349 aa11.65□□□□□ -0.54
CHMP4A-205ENST00000531158 TNFAIP1Q13829 316 aa11.65□□□□□ -0.54
CHMP4A-205ENST00000531158 UBE4AQ14139 1066 aa11.65□□□□□ -0.54
CHMP4A-205ENST00000531158 TAF1CQ15572 869 aaPredicted RBP11.65□□□□□ -0.54
CHMP4A-205ENST00000531158 FBXO33Q7Z6M2 555 aa11.65□□□□□ -0.54
CHMP4A-205ENST00000531158 WDR63Q8IWG1 891 aa11.65□□□□□ -0.54
CHMP4A-205ENST00000531158 ANKRD44Q8N8A2 993 aa11.65□□□□□ -0.54
CHMP4A-205ENST00000531158 UTYO14607 1347 aa11.64□□□□□ -0.55
CHMP4A-205ENST00000531158 MYCP01106 439 aaPredicted RBP11.64□□□□□ -0.55
CHMP4A-205ENST00000531158 MAP3K9P80192 1104 aa11.64□□□□□ -0.55
CHMP4A-205ENST00000531158 RABL6Q3YEC7 729 aaPredicted RBP11.64□□□□□ -0.55
CHMP4A-205ENST00000531158 LRRC24Q50LG9 513 aa11.64□□□□□ -0.55
CHMP4A-205ENST00000531158 OTUD7BQ6GQQ9 843 aa11.64□□□□□ -0.55
CHMP4A-205ENST00000531158 ALDH1L1O75891 902 aa11.63□□□□□ -0.55
CHMP4A-205ENST00000531158 GTF2A2P52657 109 aa11.63□□□□□ -0.55
CHMP4A-205ENST00000531158 TAF7LQ5H9L4 462 aa11.63□□□□□ -0.55
CHMP4A-205ENST00000531158 NBPF11Q86T75 865 aa11.63□□□□□ -0.55
CHMP4A-205ENST00000531158 KLHDC4Q8TBB5 520 aa11.63□□□□□ -0.55
CHMP4A-205ENST00000531158 SH3TC2Q8TF17 1288 aa11.63□□□□□ -0.55
CHMP4A-205ENST00000531158 ZKSCAN4Q969J2 545 aaPredicted RBP11.63□□□□□ -0.55
CHMP4A-205ENST00000531158 SRCIN1Q9C0H9 1055 aa11.63□□□□□ -0.55
CHMP4A-205ENST00000531158 PRO3102Q9H379 93 aa11.63□□□□□ -0.55
CHMP4A-205ENST00000531158 BICC1Q9H694 974 aaKnown RBP11.63□□□□□ -0.55
CHMP4A-205ENST00000531158 C9orf78Q9NZ63 289 aaPredicted RBP11.63□□□□□ -0.55
CHMP4A-205ENST00000531158 DOCK1Q14185 1865 aa11.63□□□□□ -0.55
CHMP4A-205ENST00000531158 MROH5Q6ZUA9 1318 aa11.62□□□□□ -0.55
CHMP4A-205ENST00000531158 BTBD19C9JJ37 291 aa11.62□□□□□ -0.55
CHMP4A-205ENST00000531158 IRF6O14896 467 aa11.62□□□□□ -0.55
CHMP4A-205ENST00000531158 LACTBP83111 547 aaPredicted RBP11.62□□□□□ -0.55
CHMP4A-205ENST00000531158 SLC9C1Q4G0N8 1177 aa11.62□□□□□ -0.55
CHMP4A-205ENST00000531158 APOBEC3HQ6NTF7 200 aaKnown RBP11.62□□□□□ -0.55
CHMP4A-205ENST00000531158 SLC4A10Q6U841 1118 aa11.62□□□□□ -0.55
CHMP4A-205ENST00000531158 SHISA4Q96DD7 197 aa11.62□□□□□ -0.55
CHMP4A-205ENST00000531158 ZFYVE28Q9HCC9 887 aa11.62□□□□□ -0.55
CHMP4A-205ENST00000531158 MRS2Q9HD23 443 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms