RNA–Protein interactions for RNA: ENST00000531091.5

AP002004.1-203, humanhuman

TSL 1 (best) BASIC

Gene AP002004.1, Length 1,768 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002004.1-203ENST00000531091 MBIPQ9NS73 344 aa8.16□□□□□ -1.1
AP002004.1-203ENST00000531091 SCN7AQ01118 1682 aa8.16□□□□□ -1.1
AP002004.1-203ENST00000531091 NRXN2Q9P2S2 1712 aa8.16□□□□□ -1.1
AP002004.1-203ENST00000531091 HMGB1P09429 215 aaKnown RBP8.15□□□□□ -1.1
AP002004.1-203ENST00000531091 SRGNP10124 158 aa8.15□□□□□ -1.1
AP002004.1-203ENST00000531091 NPR1P16066 1061 aa8.15□□□□□ -1.1
AP002004.1-203ENST00000531091 RASSF7Q02833 373 aa8.15□□□□□ -1.1
AP002004.1-203ENST00000531091 ERFEQ4G0M1 354 aa8.15□□□□□ -1.1
AP002004.1-203ENST00000531091 SUSD4Q5VX71 490 aa8.15□□□□□ -1.1
AP002004.1-203ENST00000531091 PPP1R42Q7Z4L9 355 aa8.15□□□□□ -1.1
AP002004.1-203ENST00000531091 DDX21Q9NR30 783 aaKnown RBP eCLIP8.15□□□□□ -1.1
AP002004.1-203ENST00000531091 IFT57Q9NWB7 429 aa8.15□□□□□ -1.1
AP002004.1-203ENST00000531091 CHPF2Q9P2E5 772 aa8.15□□□□□ -1.1
AP002004.1-203ENST00000531091 ZMIZ1Q9ULJ6 1067 aa8.15□□□□□ -1.1
AP002004.1-203ENST00000531091 LAMB4A4D0S4 1761 aa8.15□□□□□ -1.11
AP002004.1-203ENST00000531091 BRD1O95696 1058 aa8.15□□□□□ -1.11
AP002004.1-203ENST00000531091 ITGBL1O95965 494 aaPredicted RBP8.15□□□□□ -1.11
AP002004.1-203ENST00000531091 HSP90AB3PQ58FF7 597 aa8.15□□□□□ -1.11
AP002004.1-203ENST00000531091 ZNF34Q8IZ26 560 aa8.15□□□□□ -1.11
AP002004.1-203ENST00000531091 FAM9BQ8IZU0 186 aa8.15□□□□□ -1.11
AP002004.1-203ENST00000531091 STK32AQ8WU08 396 aa8.15□□□□□ -1.11
AP002004.1-203ENST00000531091 GZF1Q9H116 711 aaPredicted RBP8.15□□□□□ -1.11
AP002004.1-203ENST00000531091 DBF4Q9UBU7 674 aaPredicted RBP8.15□□□□□ -1.11
AP002004.1-203ENST00000531091 NOVA2Q9UNW9 492 aaKnown RBP8.15□□□□□ -1.11
AP002004.1-203ENST00000531091 ADCY9O60503 1353 aa8.14□□□□□ -1.11
AP002004.1-203ENST00000531091 HOXB7P09629 217 aa8.14□□□□□ -1.11
AP002004.1-203ENST00000531091 ZNF853P0CG23 659 aa8.14□□□□□ -1.11
AP002004.1-203ENST00000531091 LMNB1P20700 586 aa8.14□□□□□ -1.11
AP002004.1-203ENST00000531091 RASA1P20936 1047 aa8.14□□□□□ -1.11
AP002004.1-203ENST00000531091 ALDH1B1P30837 517 aa8.14□□□□□ -1.11
AP002004.1-203ENST00000531091 CRTC2Q53ET0 693 aaPredicted RBP8.14□□□□□ -1.11
AP002004.1-203ENST00000531091 PARP10Q53GL7 1025 aa8.14□□□□□ -1.11
AP002004.1-203ENST00000531091 TMEM164Q5U3C3 297 aa8.14□□□□□ -1.11
AP002004.1-203ENST00000531091 PRPF40BQ6NWY9 871 aaKnown RBP8.14□□□□□ -1.11
AP002004.1-203ENST00000531091 UTP14AQ9BVJ6 771 aaKnown RBP8.14□□□□□ -1.11
AP002004.1-203ENST00000531091 BCORQ6W2J9 1755 aa8.14□□□□□ -1.11
AP002004.1-203ENST00000531091 USP17L15C9J2P7 530 aa8.13□□□□□ -1.11
AP002004.1-203ENST00000531091 USP17L10C9JJH3 530 aa8.13□□□□□ -1.11
AP002004.1-203ENST00000531091 USP17L13C9JLJ4 530 aa8.13□□□□□ -1.11
AP002004.1-203ENST00000531091 USP17L12C9JPN9 530 aa8.13□□□□□ -1.11
AP002004.1-203ENST00000531091 USP17L11C9JVI0 530 aa8.13□□□□□ -1.11
AP002004.1-203ENST00000531091 USP17L21D6R901 530 aa8.13□□□□□ -1.11
AP002004.1-203ENST00000531091 USP17L18D6R9N7 530 aa8.13□□□□□ -1.11
AP002004.1-203ENST00000531091 USP17L22D6RA61 530 aa8.13□□□□□ -1.11
AP002004.1-203ENST00000531091 USP17L17D6RBQ6 530 aa8.13□□□□□ -1.11
AP002004.1-203ENST00000531091 USP17L19D6RCP7 530 aa8.13□□□□□ -1.11
AP002004.1-203ENST00000531091 USP17L20D6RJB6 530 aa8.13□□□□□ -1.11
AP002004.1-203ENST00000531091 SH3BP2P78314 561 aa8.13□□□□□ -1.11
AP002004.1-203ENST00000531091 USP17L24Q0WX57 530 aa8.13□□□□□ -1.11
AP002004.1-203ENST00000531091 TCIRG1Q13488 830 aa8.13□□□□□ -1.11
AP002004.1-203ENST00000531091 SOGA3Q5TF21 947 aa8.13□□□□□ -1.11
AP002004.1-203ENST00000531091 LRP10Q7Z4F1 713 aa8.13□□□□□ -1.11
AP002004.1-203ENST00000531091 RPGRQ92834 1020 aaKnown RBP8.13□□□□□ -1.11
AP002004.1-203ENST00000531091 CHMP4AQ9BY43 222 aa8.13□□□□□ -1.11
AP002004.1-203ENST00000531091 HYPKQ9NX55 129 aa8.13□□□□□ -1.11
AP002004.1-203ENST00000531091 UBN2Q6ZU65 1347 aa8.13□□□□□ -1.11
AP002004.1-203ENST00000531091 KDM2BQ8NHM5 1336 aa8.13□□□□□ -1.11
AP002004.1-203ENST00000531091 BRCA1P38398 1863 aaKnown RBP8.13□□□□□ -1.11
AP002004.1-203ENST00000531091 ARFGEF1Q9Y6D6 1849 aa8.12□□□□□ -1.11
AP002004.1-203ENST00000531091 KLRG2A4D1S0 409 aaPredicted RBP8.12□□□□□ -1.11
AP002004.1-203ENST00000531091 NFKBIEO00221 500 aa8.12□□□□□ -1.11
AP002004.1-203ENST00000531091 KCNC4Q03721 635 aa8.12□□□□□ -1.11
AP002004.1-203ENST00000531091 ELOAQ14241 798 aaKnown RBP8.12□□□□□ -1.11
AP002004.1-203ENST00000531091 EML3Q32P44 896 aa8.12□□□□□ -1.11
AP002004.1-203ENST00000531091 TRAF7Q6Q0C0 670 aa8.12□□□□□ -1.11
AP002004.1-203ENST00000531091 C16orf71Q8IYS4 520 aaPredicted RBP8.12□□□□□ -1.11
AP002004.1-203ENST00000531091 C8orf58Q8NAV2 365 aa8.12□□□□□ -1.11
AP002004.1-203ENST00000531091 PLBD2Q8NHP8 589 aa8.12□□□□□ -1.11
AP002004.1-203ENST00000531091 ZNF428Q96B54 188 aa8.12□□□□□ -1.11
AP002004.1-203ENST00000531091 SLC10A4Q96EP9 437 aa8.12□□□□□ -1.11
AP002004.1-203ENST00000531091 RBM17Q96I25 401 aaKnown RBP8.12□□□□□ -1.11
AP002004.1-203ENST00000531091 NLRP3Q96P20 1036 aa8.12□□□□□ -1.11
AP002004.1-203ENST00000531091 CCDC85AQ96PX6 553 aaPredicted RBP8.12□□□□□ -1.11
AP002004.1-203ENST00000531091 TRMT112Q9UI30 125 aaKnown RBP8.12□□□□□ -1.11
AP002004.1-203ENST00000531091 ANKRD31Q8N7Z5 1873 aa8.12□□□□□ -1.11
AP002004.1-203ENST00000531091 FAM196BA6NMK8 535 aa8.12□□□□□ -1.11
AP002004.1-203ENST00000531091 TCERG1O14776 1098 aaKnown RBP8.12□□□□□ -1.11
AP002004.1-203ENST00000531091 ZBTB24O43167 697 aaPredicted RBP8.12□□□□□ -1.11
AP002004.1-203ENST00000531091 NTSR2O95665 410 aa8.12□□□□□ -1.11
AP002004.1-203ENST00000531091 HSP90B1P14625 803 aaKnown RBP8.12□□□□□ -1.11
AP002004.1-203ENST00000531091 CCDC27Q2M243 656 aa8.12□□□□□ -1.11
AP002004.1-203ENST00000531091 MAP7D1Q3KQU3 841 aa8.12□□□□□ -1.11
AP002004.1-203ENST00000531091 CCDC93Q567U6 631 aa8.12□□□□□ -1.11
AP002004.1-203ENST00000531091 OXLD1Q5BKU9 147 aa8.12□□□□□ -1.11
AP002004.1-203ENST00000531091 CCDC30Q5VVM6 783 aa8.12□□□□□ -1.11
AP002004.1-203ENST00000531091 TSR2Q969E8 191 aaKnown RBP8.12□□□□□ -1.11
AP002004.1-203ENST00000531091 TAOK3Q9H2K8 898 aa8.12□□□□□ -1.11
AP002004.1-203ENST00000531091 RRAGCQ9HB90 399 aa8.12□□□□□ -1.11
AP002004.1-203ENST00000531091 NMRK2Q9NPI5 230 aa8.12□□□□□ -1.11
AP002004.1-203ENST00000531091 DOLKQ9UPQ8 538 aa8.12□□□□□ -1.11
AP002004.1-203ENST00000531091 RNF223E7ERA6 249 aa8.11□□□□□ -1.11
AP002004.1-203ENST00000531091 ATP5J2-PTCD1G3V325 749 aa8.11□□□□□ -1.11
AP002004.1-203ENST00000531091 PRELPP51888 382 aa8.11□□□□□ -1.11
AP002004.1-203ENST00000531091 PTK7Q13308 1070 aa8.11□□□□□ -1.11
AP002004.1-203ENST00000531091 NLRP10Q86W26 655 aa8.11□□□□□ -1.11
AP002004.1-203ENST00000531091 TMX4Q9H1E5 349 aaPredicted RBP8.11□□□□□ -1.11
AP002004.1-203ENST00000531091 PHAXQ9H814 394 aaKnown RBP8.11□□□□□ -1.11
AP002004.1-203ENST00000531091 ABCC12Q96J65 1359 aa8.11□□□□□ -1.11
AP002004.1-203ENST00000531091 NUP98P52948 1817 aa8.1□□□□□ -1.11
AP002004.1-203ENST00000531091 LZTS3O60299 673 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms