RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 MTMR14Q8NCE2 650 aa14.59□□□□□ -0.07
LTBP3-219ENST00000530990 EXOC6Q8TAG9 804 aa14.59□□□□□ -0.07
LTBP3-219ENST00000530990 HMG20BQ9P0W2 317 aa14.59□□□□□ -0.07
LTBP3-219ENST00000530990 SERPINA10Q9UK55 444 aa14.59□□□□□ -0.07
LTBP3-219ENST00000530990 SCAF8Q9UPN6 1271 aaKnown RBP14.59□□□□□ -0.07
LTBP3-219ENST00000530990 MAST3O60307 1309 aa14.59□□□□□ -0.07
LTBP3-219ENST00000530990 PITPNM2Q9BZ72 1349 aa14.59□□□□□ -0.07
LTBP3-219ENST00000530990 SPDYE2BA6NHP3 402 aa14.58□□□□□ -0.08
LTBP3-219ENST00000530990 UQCRFS1P1P0C7P4 283 aa14.58□□□□□ -0.08
LTBP3-219ENST00000530990 SPDYE6P0CI01 402 aa14.58□□□□□ -0.08
LTBP3-219ENST00000530990 CRKP46108 304 aa14.58□□□□□ -0.08
LTBP3-219ENST00000530990 RBM5P52756 815 aaKnown RBP eCLIP14.58□□□□□ -0.08
LTBP3-219ENST00000530990 USP48Q86UV5 1035 aa14.58□□□□□ -0.08
LTBP3-219ENST00000530990 CLASRPQ8N2M8 674 aaKnown RBP14.58□□□□□ -0.08
LTBP3-219ENST00000530990 SPATA5Q8NB90 893 aa14.58□□□□□ -0.08
LTBP3-219ENST00000530990 BCL11AQ9H165 835 aa14.58□□□□□ -0.08
LTBP3-219ENST00000530990 SUGT1Q9Y2Z0 365 aa14.58□□□□□ -0.08
LTBP3-219ENST00000530990 IRX6P78412 446 aaPredicted RBP14.57□□□□□ -0.08
LTBP3-219ENST00000530990 CCDC158Q5M9N0 1113 aa14.57□□□□□ -0.08
LTBP3-219ENST00000530990 SULF1Q8IWU6 871 aa14.57□□□□□ -0.08
LTBP3-219ENST00000530990 KLRG1Q96E93 195 aa14.57□□□□□ -0.08
LTBP3-219ENST00000530990 PRMT6Q96LA8 375 aaPredicted RBP14.57□□□□□ -0.08
LTBP3-219ENST00000530990 DCTPP1Q9H773 170 aa14.57□□□□□ -0.08
LTBP3-219ENST00000530990 CLRN2A0PK11 232 aa14.56□□□□□ -0.08
LTBP3-219ENST00000530990 SMARCA5O60264 1052 aaPredicted RBP14.56□□□□□ -0.08
LTBP3-219ENST00000530990 LDHBP07195 334 aaKnown RBP14.56□□□□□ -0.08
LTBP3-219ENST00000530990 DIXDC1Q155Q3 683 aa14.56□□□□□ -0.08
LTBP3-219ENST00000530990 ZGPATQ8N5A5 531 aaKnown RBP14.56□□□□□ -0.08
LTBP3-219ENST00000530990 TEKT1Q969V4 418 aa14.56□□□□□ -0.08
LTBP3-219ENST00000530990 LRRCC1Q9C099 1032 aa14.56□□□□□ -0.08
LTBP3-219ENST00000530990 ZNF408Q9H9D4 720 aa14.56□□□□□ -0.08
LTBP3-219ENST00000530990 SNRKQ9NRH2 765 aa14.56□□□□□ -0.08
LTBP3-219ENST00000530990 CREBZFQ9NS37 354 aa14.56□□□□□ -0.08
LTBP3-219ENST00000530990 ABCF2Q9UG63 623 aa14.56□□□□□ -0.08
LTBP3-219ENST00000530990 TMEM88BA6NKF7 163 aa14.55□□□□□ -0.08
LTBP3-219ENST00000530990 MYO1BO43795 1136 aa14.55□□□□□ -0.08
LTBP3-219ENST00000530990 CELF2O95319 508 aaKnown RBP14.55□□□□□ -0.08
LTBP3-219ENST00000530990 IFIT2P09913 472 aaKnown RBP14.55□□□□□ -0.08
LTBP3-219ENST00000530990 HDLBPQ00341 1268 aaKnown RBP14.55□□□□□ -0.08
LTBP3-219ENST00000530990 AAMPQ13685 434 aa14.55□□□□□ -0.08
LTBP3-219ENST00000530990 CST9Q5W186 159 aa14.55□□□□□ -0.08
LTBP3-219ENST00000530990 TBC1D9Q6ZT07 1266 aa14.55□□□□□ -0.08
LTBP3-219ENST00000530990 APOBEC3FQ8IUX4 373 aaKnown RBP14.55□□□□□ -0.08
LTBP3-219ENST00000530990 CDCA5Q96FF9 252 aa14.55□□□□□ -0.08
LTBP3-219ENST00000530990 ZNF512BQ96KM6 892 aaPredicted RBP14.55□□□□□ -0.08
LTBP3-219ENST00000530990 TDRD3Q9H7E2 651 aaKnown RBP14.55□□□□□ -0.08
LTBP3-219ENST00000530990 PAPPA2Q9BXP8 1791 aa14.55□□□□□ -0.08
LTBP3-219ENST00000530990 SPDYE2Q495Y8 402 aa14.54□□□□□ -0.08
LTBP3-219ENST00000530990 HHIPL2Q6UWX4 724 aa14.54□□□□□ -0.08
LTBP3-219ENST00000530990 DZIP1Q86YF9 867 aaKnown RBP14.54□□□□□ -0.08
LTBP3-219ENST00000530990 ZDHHC15Q96MV8 337 aa14.54□□□□□ -0.08
LTBP3-219ENST00000530990 VEZTQ9HBM0 779 aa14.54□□□□□ -0.08
LTBP3-219ENST00000530990 DAGLAQ9Y4D2 1042 aa14.54□□□□□ -0.08
LTBP3-219ENST00000530990 NDUFB9Q9Y6M9 179 aa14.54□□□□□ -0.08
LTBP3-219ENST00000530990 CDK5RAP2Q96SN8 1893 aa14.54□□□□□ -0.08
LTBP3-219ENST00000530990 MYH7P12883 1935 aa14.54□□□□□ -0.08
LTBP3-219ENST00000530990 ZAP70P43403 619 aa14.53□□□□□ -0.08
LTBP3-219ENST00000530990 HDAC1Q13547 482 aaPredicted RBP14.53□□□□□ -0.08
LTBP3-219ENST00000530990 IFFO2Q5TF58 517 aa14.53□□□□□ -0.08
LTBP3-219ENST00000530990 ERICH6Q7L0X2 663 aa14.53□□□□□ -0.08
LTBP3-219ENST00000530990 MRIQ9BWK5 157 aa14.53□□□□□ -0.08
LTBP3-219ENST00000530990 ZNF70Q9UC06 446 aaPredicted RBP14.53□□□□□ -0.08
LTBP3-219ENST00000530990 OTOFQ9HC10 1997 aa14.53□□□□□ -0.08
LTBP3-219ENST00000530990 SSC5DA1L4H1 1573 aa14.52□□□□□ -0.08
LTBP3-219ENST00000530990 CYP2E1P05181 493 aaPredicted RBP14.52□□□□□ -0.09
LTBP3-219ENST00000530990 MECOMQ03112 1051 aa14.52□□□□□ -0.09
LTBP3-219ENST00000530990 PRAMEF18Q5VWM3 479 aa14.52□□□□□ -0.09
LTBP3-219ENST00000530990 SPTY2D1Q68D10 685 aaPredicted RBP14.52□□□□□ -0.09
LTBP3-219ENST00000530990 APOBEC3HQ6NTF7 200 aaKnown RBP14.52□□□□□ -0.09
LTBP3-219ENST00000530990 ZNF384Q8TF68 577 aa14.52□□□□□ -0.09
LTBP3-219ENST00000530990 PIH1D3Q9NQM4 214 aaKnown RBP14.52□□□□□ -0.09
LTBP3-219ENST00000530990 ABT1Q9ULW3 272 aaKnown RBP14.52□□□□□ -0.09
LTBP3-219ENST00000530990 FOCADQ5VW36 1801 aa14.52□□□□□ -0.09
LTBP3-219ENST00000530990 GAKO14976 1311 aa14.51□□□□□ -0.09
LTBP3-219ENST00000530990 CACNB3P54284 484 aa14.51□□□□□ -0.09
LTBP3-219ENST00000530990 JMYQ8N9B5 988 aa14.51□□□□□ -0.09
LTBP3-219ENST00000530990 NSUN4Q96CB9 384 aaKnown RBP14.51□□□□□ -0.09
LTBP3-219ENST00000530990 DEFB129Q9H1M3 183 aa14.51□□□□□ -0.09
LTBP3-219ENST00000530990 RAI14Q9P0K7 980 aa14.51□□□□□ -0.09
LTBP3-219ENST00000530990 THSD7BQ9C0I4 1608 aa14.51□□□□□ -0.09
LTBP3-219ENST00000530990 AK9Q5TCS8 1911 aa14.51□□□□□ -0.09
LTBP3-219ENST00000530990 CNTNAP1P78357 1384 aa14.5□□□□□ -0.09
LTBP3-219ENST00000530990 MROH7-TTC4A0A0A0MT08 1334 aa14.5□□□□□ -0.09
LTBP3-219ENST00000530990 TCP10L2B9ZVM9 353 aa14.5□□□□□ -0.09
LTBP3-219ENST00000530990 ANTXR1Q9H6X2 564 aa14.5□□□□□ -0.09
LTBP3-219ENST00000530990 LRP2BPQ9P2M1 347 aa14.5□□□□□ -0.09
LTBP3-219ENST00000530990 MKRN1Q9UHC7 482 aaKnown RBP14.5□□□□□ -0.09
LTBP3-219ENST00000530990 TLL2Q9Y6L7 1015 aa14.5□□□□□ -0.09
LTBP3-219ENST00000530990 TNFAIP1Q13829 316 aa14.49□□□□□ -0.09
LTBP3-219ENST00000530990 CDC42EP5Q6NZY7 148 aa14.49□□□□□ -0.09
LTBP3-219ENST00000530990 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.49□□□□□ -0.09
LTBP3-219ENST00000530990 GCC1Q96CN9 775 aa14.49□□□□□ -0.09
LTBP3-219ENST00000530990 DNAJC2Q99543 621 aaKnown RBP14.49□□□□□ -0.09
LTBP3-219ENST00000530990 GBA2Q9HCG7 927 aaPredicted RBP14.49□□□□□ -0.09
LTBP3-219ENST00000530990 TMOD2Q9NZR1 351 aa14.49□□□□□ -0.09
LTBP3-219ENST00000530990 PPP2R3BQ9Y5P8 575 aa14.49□□□□□ -0.09
LTBP3-219ENST00000530990 PCNTO95613 3336 aa14.49□□□□□ -0.09
LTBP3-219ENST00000530990 RFX7Q2KHR2 1363 aa14.48□□□□□ -0.09
LTBP3-219ENST00000530990 RASSF10A6NK89 507 aa14.48□□□□□ -0.09
LTBP3-219ENST00000530990 IGHDP01880 384 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms