RNA–Protein interactions for RNA: ENST00000530724.1

TRIM3-210, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 651 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-210ENST00000530724 PFKFB1P16118 471 aa13.48□□□□□ -0.25
TRIM3-210ENST00000530724 EIF2S2P20042 333 aaKnown RBP13.48□□□□□ -0.25
TRIM3-210ENST00000530724 MAGEA9P43362 315 aa13.48□□□□□ -0.25
TRIM3-210ENST00000530724 ST5P78524 1137 aa13.48□□□□□ -0.25
TRIM3-210ENST00000530724 PTPN12Q05209 780 aaKnown RBP13.48□□□□□ -0.25
TRIM3-210ENST00000530724 TEFQ10587 303 aa13.48□□□□□ -0.25
TRIM3-210ENST00000530724 GCKRQ14397 625 aa13.48□□□□□ -0.25
TRIM3-210ENST00000530724 BEND6Q5SZJ8 279 aaPredicted RBP13.48□□□□□ -0.25
TRIM3-210ENST00000530724 RESP18Q5W5W9 173 aa13.48□□□□□ -0.25
TRIM3-210ENST00000530724 HDXQ7Z353 690 aa13.48□□□□□ -0.25
TRIM3-210ENST00000530724 ARHGEF25Q86VW2 580 aa13.48□□□□□ -0.25
TRIM3-210ENST00000530724 ENOX1Q8TC92 643 aaKnown RBP13.48□□□□□ -0.25
TRIM3-210ENST00000530724 BAG1Q99933 345 aaPredicted RBP13.48□□□□□ -0.25
TRIM3-210ENST00000530724 METTL22Q9BUU2 404 aaPredicted RBP13.48□□□□□ -0.25
TRIM3-210ENST00000530724 FTOQ9C0B1 505 aaKnown RBP eCLIP13.48□□□□□ -0.25
TRIM3-210ENST00000530724 MED4Q9NPJ6 270 aa13.48□□□□□ -0.25
TRIM3-210ENST00000530724 GEMIN8Q9NWZ8 242 aaKnown RBP13.48□□□□□ -0.25
TRIM3-210ENST00000530724 L1RE1Q9UN81 338 aa13.48□□□□□ -0.25
TRIM3-210ENST00000530724 A0A1B0GVL5 298 aa13.47□□□□□ -0.25
TRIM3-210ENST00000530724 SEMA3EO15041 775 aa13.47□□□□□ -0.25
TRIM3-210ENST00000530724 CUTAO60888 179 aa13.47□□□□□ -0.25
TRIM3-210ENST00000530724 AARSP49588 968 aaKnown RBP eCLIP13.47□□□□□ -0.25
TRIM3-210ENST00000530724 NLRP6P59044 892 aa13.47□□□□□ -0.25
TRIM3-210ENST00000530724 KIF23Q02241 960 aaPredicted RBP13.47□□□□□ -0.25
TRIM3-210ENST00000530724 GOLGA6L1Q8N7Z2 621 aa13.47□□□□□ -0.25
TRIM3-210ENST00000530724 TC2NQ8N9U0 490 aa13.47□□□□□ -0.25
TRIM3-210ENST00000530724 MLKLQ8NB16 471 aa13.47□□□□□ -0.25
TRIM3-210ENST00000530724 NGDNQ8NEJ9 315 aaKnown RBP13.47□□□□□ -0.25
TRIM3-210ENST00000530724 NEK11Q8NG66 645 aa13.47□□□□□ -0.25
TRIM3-210ENST00000530724 CCDC51Q96ER9 411 aa13.47□□□□□ -0.25
TRIM3-210ENST00000530724 TRIM34Q9BYJ4 488 aa13.47□□□□□ -0.25
TRIM3-210ENST00000530724 LGR6Q9HBX8 967 aa13.47□□□□□ -0.25
TRIM3-210ENST00000530724 INTS13Q9NVM9 706 aa13.47□□□□□ -0.25
TRIM3-210ENST00000530724 DACH1Q9UI36 760 aa13.47□□□□□ -0.25
TRIM3-210ENST00000530724 MST1RQ04912 1400 aa13.47□□□□□ -0.25
TRIM3-210ENST00000530724 NID2Q14112 1375 aa13.46□□□□□ -0.25
TRIM3-210ENST00000530724 ERCC5P28715 1186 aaPredicted RBP13.46□□□□□ -0.25
TRIM3-210ENST00000530724 MDM2Q00987 491 aaPredicted RBP13.46□□□□□ -0.25
TRIM3-210ENST00000530724 PTPAQ15257 358 aa13.46□□□□□ -0.25
TRIM3-210ENST00000530724 SF3A1Q15459 793 aaKnown RBP13.46□□□□□ -0.25
TRIM3-210ENST00000530724 SPECC1LQ69YQ0 1117 aa13.46□□□□□ -0.25
TRIM3-210ENST00000530724 WDR93Q6P2C0 686 aa13.46□□□□□ -0.25
TRIM3-210ENST00000530724 CCDC191Q8NCU4 936 aa13.46□□□□□ -0.25
TRIM3-210ENST00000530724 FAM71BQ8TC56 605 aa13.46□□□□□ -0.25
TRIM3-210ENST00000530724 C8orf76Q96K31 380 aa13.46□□□□□ -0.25
TRIM3-210ENST00000530724 FAM107BQ9H098 131 aa13.46□□□□□ -0.25
TRIM3-210ENST00000530724 HOOK1Q9UJC3 728 aaKnown RBP13.46□□□□□ -0.25
TRIM3-210ENST00000530724 CDC23Q9UJX2 597 aa13.46□□□□□ -0.25
TRIM3-210ENST00000530724 RRP15Q9Y3B9 282 aaKnown RBP13.46□□□□□ -0.25
TRIM3-210ENST00000530724 CLIC4Q9Y696 253 aa13.46□□□□□ -0.25
TRIM3-210ENST00000530724 CPDO75976 1380 aa13.45□□□□□ -0.26
TRIM3-210ENST00000530724 A0A1B0GUL7 405 aa13.45□□□□□ -0.26
TRIM3-210ENST00000530724 ZFYP08048 801 aaPredicted RBP13.45□□□□□ -0.26
TRIM3-210ENST00000530724 SARSP49591 514 aaKnown RBP13.45□□□□□ -0.26
TRIM3-210ENST00000530724 NEXNQ0ZGT2 675 aa13.45□□□□□ -0.26
TRIM3-210ENST00000530724 WHAMMP3Q1A5X7 153 aa13.45□□□□□ -0.26
TRIM3-210ENST00000530724 CWF19L2Q2TBE0 894 aaKnown RBP13.45□□□□□ -0.26
TRIM3-210ENST00000530724 OLFM4Q6UX06 510 aa13.45□□□□□ -0.26
TRIM3-210ENST00000530724 LRP10Q7Z4F1 713 aa13.45□□□□□ -0.26
TRIM3-210ENST00000530724 SUGP1Q8IWZ8 645 aaKnown RBP13.45□□□□□ -0.26
TRIM3-210ENST00000530724 ZNF579Q8NAF0 562 aaKnown RBP13.45□□□□□ -0.26
TRIM3-210ENST00000530724 KCNH5Q8NCM2 988 aa13.45□□□□□ -0.26
TRIM3-210ENST00000530724 SPATA20Q8TB22 786 aa13.45□□□□□ -0.26
TRIM3-210ENST00000530724 ACBD3Q9H3P7 528 aa13.45□□□□□ -0.26
TRIM3-210ENST00000530724 FBXO3Q9UK99 471 aa13.45□□□□□ -0.26
TRIM3-210ENST00000530724 ITIH6Q6UXX5 1313 aa13.44□□□□□ -0.26
TRIM3-210ENST00000530724 STK36Q9NRP7 1315 aa13.44□□□□□ -0.26
TRIM3-210ENST00000530724 H3BQF6 201 aa13.44□□□□□ -0.26
TRIM3-210ENST00000530724 KCNQ3O43525 872 aa13.44□□□□□ -0.26
TRIM3-210ENST00000530724 SEC31AO94979 1220 aaKnown RBP13.44□□□□□ -0.26
TRIM3-210ENST00000530724 PBX1P40424 430 aa13.44□□□□□ -0.26
TRIM3-210ENST00000530724 SYKP43405 635 aa13.44□□□□□ -0.26
TRIM3-210ENST00000530724 CASP7P55210 303 aa13.44□□□□□ -0.26
TRIM3-210ENST00000530724 GNG11P61952 73 aa13.44□□□□□ -0.26
TRIM3-210ENST00000530724 PROSER3Q2NL68 480 aa13.44□□□□□ -0.26
TRIM3-210ENST00000530724 SWT1Q5T5J6 900 aaKnown RBP13.44□□□□□ -0.26
TRIM3-210ENST00000530724 LEKR1Q6ZMV7 388 aa13.44□□□□□ -0.26
TRIM3-210ENST00000530724 SYNE3Q6ZMZ3 975 aa13.44□□□□□ -0.26
TRIM3-210ENST00000530724 MB21D2Q8IYB1 491 aaPredicted RBP13.44□□□□□ -0.26
TRIM3-210ENST00000530724 RUBCNQ92622 972 aa13.44□□□□□ -0.26
TRIM3-210ENST00000530724 FMNL2Q96PY5 1086 aa13.44□□□□□ -0.26
TRIM3-210ENST00000530724 WDR24Q96S15 920 aa13.44□□□□□ -0.26
TRIM3-210ENST00000530724 MAP3K14Q99558 947 aa13.44□□□□□ -0.26
TRIM3-210ENST00000530724 ANKZF1Q9H8Y5 726 aa13.44□□□□□ -0.26
TRIM3-210ENST00000530724 HPS5Q9UPZ3 1129 aa13.44□□□□□ -0.26
TRIM3-210ENST00000530724 LAMA4Q16363 1823 aa13.43□□□□□ -0.26
TRIM3-210ENST00000530724 MROH7-TTC4A0A0A0MT08 1334 aa13.43□□□□□ -0.26
TRIM3-210ENST00000530724 A0A1B0GTH6 734 aa13.43□□□□□ -0.26
TRIM3-210ENST00000530724 POLR3GO15318 223 aaPredicted RBP13.43□□□□□ -0.26
TRIM3-210ENST00000530724 RNF113AO15541 343 aaKnown RBP13.43□□□□□ -0.26
TRIM3-210ENST00000530724 CDKL5O76039 1030 aa13.43□□□□□ -0.26
TRIM3-210ENST00000530724 CIAO1O76071 339 aa13.43□□□□□ -0.26
TRIM3-210ENST00000530724 SERPINC1P01008 464 aa13.43□□□□□ -0.26
TRIM3-210ENST00000530724 CCDC175P0C221 793 aa13.43□□□□□ -0.26
TRIM3-210ENST00000530724 HSPD1P10809 573 aaKnown RBP13.43□□□□□ -0.26
TRIM3-210ENST00000530724 ATP1A3P13637 1013 aa13.43□□□□□ -0.26
TRIM3-210ENST00000530724 MCM3P25205 808 aa13.43□□□□□ -0.26
TRIM3-210ENST00000530724 LMOD1P29536 600 aaPredicted RBP13.43□□□□□ -0.26
TRIM3-210ENST00000530724 CORO7P57737 925 aa13.43□□□□□ -0.26
TRIM3-210ENST00000530724 CHMP4BP1P59074 171 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms