RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 BCL11AQ9H165 835 aa10.11□□□□□ -0.79
SVIP-204ENST00000530199 GPC6Q9Y625 555 aaPredicted RBP10.11□□□□□ -0.79
SVIP-204ENST00000530199 KIF1BO60333 1816 aa10.11□□□□□ -0.79
SVIP-204ENST00000530199 GPRASP1Q5JY77 1395 aa10.11□□□□□ -0.79
SVIP-204ENST00000530199 ARHGEF28Q8N1W1 1705 aaKnown RBP10.1□□□□□ -0.79
SVIP-204ENST00000530199 TNS2Q63HR2 1409 aa10.1□□□□□ -0.79
SVIP-204ENST00000530199 LDHBP07195 334 aaKnown RBP10.1□□□□□ -0.79
SVIP-204ENST00000530199 FGD1P98174 961 aa10.1□□□□□ -0.79
SVIP-204ENST00000530199 MRPL14Q6P1L8 145 aaKnown RBP10.1□□□□□ -0.79
SVIP-204ENST00000530199 LYSMD3Q7Z3D4 306 aa10.1□□□□□ -0.79
SVIP-204ENST00000530199 GPR152Q8TDT2 470 aa10.1□□□□□ -0.79
SVIP-204ENST00000530199 NIF3L1Q9GZT8 377 aa10.1□□□□□ -0.79
SVIP-204ENST00000530199 TOPAZ1Q8N9V7 1692 aa10.09□□□□□ -0.79
SVIP-204ENST00000530199 TULP4Q9NRJ4 1543 aa10.09□□□□□ -0.79
SVIP-204ENST00000530199 LRRC37A3O60309 1634 aa10.09□□□□□ -0.79
SVIP-204ENST00000530199 PCSK2P16519 638 aa10.09□□□□□ -0.79
SVIP-204ENST00000530199 ATP4AP20648 1035 aa10.09□□□□□ -0.79
SVIP-204ENST00000530199 IER5Q5VY09 327 aa10.09□□□□□ -0.79
SVIP-204ENST00000530199 ZNF280CQ8ND82 737 aa10.09□□□□□ -0.79
SVIP-204ENST00000530199 PMFBP1Q8TBY8 1022 aa10.09□□□□□ -0.79
SVIP-204ENST00000530199 NUDT16Q96DE0 195 aaKnown RBP10.09□□□□□ -0.79
SVIP-204ENST00000530199 FAM13BQ9NYF5 915 aa10.09□□□□□ -0.79
SVIP-204ENST00000530199 STK26Q9P289 416 aa10.09□□□□□ -0.79
SVIP-204ENST00000530199 DMGDHQ9UI17 866 aaKnown RBP10.09□□□□□ -0.79
SVIP-204ENST00000530199 PDZRN3Q9UPQ7 1066 aa10.09□□□□□ -0.79
SVIP-204ENST00000530199 PHRF1Q9P1Y6 1649 aaKnown RBP10.08□□□□□ -0.8
SVIP-204ENST00000530199 PRPF40AO75400 957 aaKnown RBP10.08□□□□□ -0.8
SVIP-204ENST00000530199 HSPA1AP0DMV8 641 aaKnown RBP10.08□□□□□ -0.8
SVIP-204ENST00000530199 HSPA1BP0DMV9 641 aaKnown RBP10.08□□□□□ -0.8
SVIP-204ENST00000530199 DDB1Q16531 1140 aa10.08□□□□□ -0.8
SVIP-204ENST00000530199 BICDL1Q6ZP65 573 aa10.08□□□□□ -0.8
SVIP-204ENST00000530199 LMO7Q8WWI1 1683 aa10.08□□□□□ -0.8
SVIP-204ENST00000530199 VPS8Q8N3P4 1428 aa10.07□□□□□ -0.8
SVIP-204ENST00000530199 QSER1Q2KHR3 1735 aa10.07□□□□□ -0.8
SVIP-204ENST00000530199 PPLO60437 1756 aa10.07□□□□□ -0.8
SVIP-204ENST00000530199 OPLAHO14841 1288 aa10.07□□□□□ -0.8
SVIP-204ENST00000530199 RECKO95980 971 aa10.07□□□□□ -0.8
SVIP-204ENST00000530199 TCF3P15923 654 aa10.07□□□□□ -0.8
SVIP-204ENST00000530199 HTRA3P83110 453 aa10.07□□□□□ -0.8
SVIP-204ENST00000530199 HSH2DQ96JZ2 352 aa10.07□□□□□ -0.8
SVIP-204ENST00000530199 GGNBP2Q9H3C7 697 aa10.07□□□□□ -0.8
SVIP-204ENST00000530199 ANKIB1Q9P2G1 1089 aa10.07□□□□□ -0.8
SVIP-204ENST00000530199 CPDO75976 1380 aa10.06□□□□□ -0.8
SVIP-204ENST00000530199 TTLL8A6PVC2 850 aa10.06□□□□□ -0.8
SVIP-204ENST00000530199 AVPP01185 164 aa10.06□□□□□ -0.8
SVIP-204ENST00000530199 RPLP1P05386 114 aaKnown RBP10.06□□□□□ -0.8
SVIP-204ENST00000530199 ZC3H6P61129 1189 aaKnown RBP10.06□□□□□ -0.8
SVIP-204ENST00000530199 MRPL58Q14197 206 aaKnown RBP10.06□□□□□ -0.8
SVIP-204ENST00000530199 ENOX2Q16206 610 aaKnown RBP10.06□□□□□ -0.8
SVIP-204ENST00000530199 ZNF827Q17R98 1081 aa10.06□□□□□ -0.8
SVIP-204ENST00000530199 PIK3R5Q8WYR1 880 aa10.06□□□□□ -0.8
SVIP-204ENST00000530199 ZIC5Q96T25 663 aa10.06□□□□□ -0.8
SVIP-204ENST00000530199 TIMMDC1Q9NPL8 285 aa10.06□□□□□ -0.8
SVIP-204ENST00000530199 CRB1P82279 1406 aa10.06□□□□□ -0.8
SVIP-204ENST00000530199 A0A1B0GTH6 734 aa10.05□□□□□ -0.8
SVIP-204ENST00000530199 MSX1P28360 303 aa10.05□□□□□ -0.8
SVIP-204ENST00000530199 IDH3AP50213 366 aa10.05□□□□□ -0.8
SVIP-204ENST00000530199 ATP2B2Q01814 1243 aa10.05□□□□□ -0.8
SVIP-204ENST00000530199 FSTL1Q12841 308 aa10.05□□□□□ -0.8
SVIP-204ENST00000530199 SCARF1Q14162 830 aa10.05□□□□□ -0.8
SVIP-204ENST00000530199 C8orf34Q49A92 452 aa10.05□□□□□ -0.8
SVIP-204ENST00000530199 MARCH10Q8NA82 808 aaPredicted RBP10.05□□□□□ -0.8
SVIP-204ENST00000530199 DUSP9Q99956 384 aaKnown RBP10.05□□□□□ -0.8
SVIP-204ENST00000530199 PARP2Q9UGN5 583 aa10.05□□□□□ -0.8
SVIP-204ENST00000530199 YTHDC2Q9H6S0 1430 aaKnown RBP10.05□□□□□ -0.8
SVIP-204ENST00000530199 BRD4O60885 1362 aaPredicted RBP10.04□□□□□ -0.8
SVIP-204ENST00000530199 ROCK1Q13464 1354 aa10.04□□□□□ -0.8
SVIP-204ENST00000530199 ANKRD30BQ9BXX2 1392 aa10.04□□□□□ -0.8
SVIP-204ENST00000530199 PNMA6FA0A0J9YX94 578 aa10.04□□□□□ -0.8
SVIP-204ENST00000530199 FAM187AA6NFU0 413 aa10.04□□□□□ -0.8
SVIP-204ENST00000530199 RGS20O76081 388 aa10.04□□□□□ -0.8
SVIP-204ENST00000530199 RHOQP17081 205 aa10.04□□□□□ -0.8
SVIP-204ENST00000530199 INPP5BP32019 993 aa10.04□□□□□ -0.8
SVIP-204ENST00000530199 ARSJQ5FYB0 599 aaPredicted RBP10.04□□□□□ -0.8
SVIP-204ENST00000530199 TTC16Q8NEE8 873 aa10.04□□□□□ -0.8
SVIP-204ENST00000530199 SETDB2Q96T68 719 aa10.04□□□□□ -0.8
SVIP-204ENST00000530199 NEUROD4Q9HD90 331 aa10.04□□□□□ -0.8
SVIP-204ENST00000530199 COL5A2P05997 1499 aaPredicted RBP10.04□□□□□ -0.8
SVIP-204ENST00000530199 A6NHS1 94 aa10.03□□□□□ -0.8
SVIP-204ENST00000530199 BMP1P13497 986 aa10.03□□□□□ -0.8
SVIP-204ENST00000530199 TSNAXIP1Q2TAA8 658 aa10.03□□□□□ -0.8
SVIP-204ENST00000530199 ALG1LQ6GMV1 187 aa10.03□□□□□ -0.8
SVIP-204ENST00000530199 LRRC69Q6ZNQ3 347 aa10.03□□□□□ -0.8
SVIP-204ENST00000530199 BTLAQ7Z6A9 289 aa10.03□□□□□ -0.8
SVIP-204ENST00000530199 BACH2Q9BYV9 841 aa10.03□□□□□ -0.8
SVIP-204ENST00000530199 RNF19AQ9NV58 838 aa10.03□□□□□ -0.8
SVIP-204ENST00000530199 CD2APQ9Y5K6 639 aa10.03□□□□□ -0.8
SVIP-204ENST00000530199 AKAP12Q02952 1782 aa10.02□□□□□ -0.81
SVIP-204ENST00000530199 ARSDP51689 593 aa10.02□□□□□ -0.81
SVIP-204ENST00000530199 ORC1Q13415 861 aa10.02□□□□□ -0.81
SVIP-204ENST00000530199 TMC4Q7Z404 712 aa10.02□□□□□ -0.81
SVIP-204ENST00000530199 TRIM46Q7Z4K8 759 aa10.02□□□□□ -0.81
SVIP-204ENST00000530199 FAM161BQ96MY7 647 aa10.02□□□□□ -0.81
SVIP-204ENST00000530199 CSRNP1Q96S65 589 aa10.02□□□□□ -0.81
SVIP-204ENST00000530199 PNPLA7Q6ZV29 1317 aa10.02□□□□□ -0.81
SVIP-204ENST00000530199 A0A1W2PNR3 127 aa10.01□□□□□ -0.81
SVIP-204ENST00000530199 FIGNL2A6NMB9 653 aa10.01□□□□□ -0.81
SVIP-204ENST00000530199 NEFLP07196 543 aa10.01□□□□□ -0.81
SVIP-204ENST00000530199 DAB2P98082 770 aa10.01□□□□□ -0.81
SVIP-204ENST00000530199 TMEM132EQ6IEE7 984 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms