RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 MFAP1P55081 439 aaKnown RBP7.96□□□□□ -1.14
C11orf88-204ENST00000529661 ALG1LQ6GMV1 187 aa7.96□□□□□ -1.14
C11orf88-204ENST00000529661 UTP4Q969X6 686 aaKnown RBP7.96□□□□□ -1.14
C11orf88-204ENST00000529661 CYP11A1P05108 521 aa7.95□□□□□ -1.14
C11orf88-204ENST00000529661 LDHBP07195 334 aaKnown RBP7.95□□□□□ -1.14
C11orf88-204ENST00000529661 MAOBP27338 520 aa7.95□□□□□ -1.14
C11orf88-204ENST00000529661 POU4F3Q15319 338 aa7.95□□□□□ -1.14
C11orf88-204ENST00000529661 NUTM2GQ5VZR2 741 aa7.95□□□□□ -1.14
C11orf88-204ENST00000529661 ANKRD34AQ69YU3 496 aa7.95□□□□□ -1.14
C11orf88-204ENST00000529661 GPN3Q9UHW5 284 aaPredicted RBP7.95□□□□□ -1.14
C11orf88-204ENST00000529661 AKAP2Q9Y2D5 859 aa7.95□□□□□ -1.14
C11orf88-204ENST00000529661 PREPP48147 710 aa7.94□□□□□ -1.14
C11orf88-204ENST00000529661 FAAP100Q0VG06 881 aa7.94□□□□□ -1.14
C11orf88-204ENST00000529661 RPS26P11Q5JNZ5 115 aaPredicted RBP7.94□□□□□ -1.14
C11orf88-204ENST00000529661 PRSS36Q5K4E3 855 aa7.94□□□□□ -1.14
C11orf88-204ENST00000529661 XP32Q5T750 250 aa7.94□□□□□ -1.14
C11orf88-204ENST00000529661 PRR23CQ6ZRP0 262 aa7.94□□□□□ -1.14
C11orf88-204ENST00000529661 NPM2Q86SE8 214 aaKnown RBP7.94□□□□□ -1.14
C11orf88-204ENST00000529661 C12orf50Q8NA57 414 aaPredicted RBP7.94□□□□□ -1.14
C11orf88-204ENST00000529661 CORO1BQ9BR76 489 aa7.94□□□□□ -1.14
C11orf88-204ENST00000529661 TRIM56Q9BRZ2 755 aaKnown RBP7.94□□□□□ -1.14
C11orf88-204ENST00000529661 NRSN2Q9GZP1 204 aa7.94□□□□□ -1.14
C11orf88-204ENST00000529661 DHX15O43143 795 aaKnown RBP7.93□□□□□ -1.14
C11orf88-204ENST00000529661 GAS2O43903 313 aaKnown RBP7.93□□□□□ -1.14
C11orf88-204ENST00000529661 XRCC5P13010 732 aaKnown RBP7.93□□□□□ -1.14
C11orf88-204ENST00000529661 ARMC10Q8N2F6 343 aa7.93□□□□□ -1.14
C11orf88-204ENST00000529661 Q8N3U1 123 aa7.93□□□□□ -1.14
C11orf88-204ENST00000529661 FAM46AQ96IP4 442 aaKnown RBP7.93□□□□□ -1.14
C11orf88-204ENST00000529661 TMPRSS13Q9BYE2 586 aa7.93□□□□□ -1.14
C11orf88-204ENST00000529661 SPG7Q9UQ90 795 aa7.93□□□□□ -1.14
C11orf88-204ENST00000529661 MEGF11A6BM72 1044 aa7.92□□□□□ -1.14
C11orf88-204ENST00000529661 ECEL1O95672 775 aa7.92□□□□□ -1.14
C11orf88-204ENST00000529661 CTSBP07858 339 aa7.92□□□□□ -1.14
C11orf88-204ENST00000529661 UVSSAQ2YD98 709 aa7.92□□□□□ -1.14
C11orf88-204ENST00000529661 EXOSC6Q5RKV6 272 aaKnown RBP7.92□□□□□ -1.14
C11orf88-204ENST00000529661 ZMYM1Q5SVZ6 1142 aa7.92□□□□□ -1.14
C11orf88-204ENST00000529661 MYRFLQ96LU7 910 aa7.92□□□□□ -1.14
C11orf88-204ENST00000529661 OSBPL7Q9BZF2 842 aa7.92□□□□□ -1.14
C11orf88-204ENST00000529661 ZFYVE1Q9HBF4 777 aa7.92□□□□□ -1.14
C11orf88-204ENST00000529661 CYP4F12Q9HCS2 524 aa7.92□□□□□ -1.14
C11orf88-204ENST00000529661 DRD2P14416 443 aa7.91□□□□□ -1.14
C11orf88-204ENST00000529661 GSTT1P30711 240 aa7.91□□□□□ -1.14
C11orf88-204ENST00000529661 AP3B2Q13367 1082 aa7.91□□□□□ -1.14
C11orf88-204ENST00000529661 PDE3AQ14432 1141 aa7.91□□□□□ -1.14
C11orf88-204ENST00000529661 EAPPQ56P03 285 aaPredicted RBP7.91□□□□□ -1.14
C11orf88-204ENST00000529661 STOML1Q9UBI4 398 aa7.91□□□□□ -1.14
C11orf88-204ENST00000529661 RAXQ9Y2V3 346 aa7.91□□□□□ -1.14
C11orf88-204ENST00000529661 BMP3P12645 472 aa7.9□□□□□ -1.14
C11orf88-204ENST00000529661 PPP2R3AQ06190 1150 aa7.9□□□□□ -1.14
C11orf88-204ENST00000529661 CCDC27Q2M243 656 aa7.9□□□□□ -1.14
C11orf88-204ENST00000529661 HP1BP3Q5SSJ5 553 aaPredicted RBP7.9□□□□□ -1.14
C11orf88-204ENST00000529661 SMG8Q8ND04 991 aaKnown RBP7.9□□□□□ -1.14
C11orf88-204ENST00000529661 C3orf58Q8NDZ4 430 aa7.9□□□□□ -1.14
C11orf88-204ENST00000529661 ZC3H12CQ9C0D7 883 aaKnown RBP7.9□□□□□ -1.14
C11orf88-204ENST00000529661 SRCIN1Q9C0H9 1055 aa7.9□□□□□ -1.14
C11orf88-204ENST00000529661 KCNF1Q9H3M0 494 aa7.9□□□□□ -1.14
C11orf88-204ENST00000529661 SUGCTQ9HAC7 445 aa7.9□□□□□ -1.14
C11orf88-204ENST00000529661 RAD18Q9NS91 495 aa7.9□□□□□ -1.14
C11orf88-204ENST00000529661 TMEM39AQ9NV64 488 aa7.9□□□□□ -1.14
C11orf88-204ENST00000529661 GIPC1O14908 333 aa7.89□□□□□ -1.15
C11orf88-204ENST00000529661 PRPF40AO75400 957 aaKnown RBP7.89□□□□□ -1.15
C11orf88-204ENST00000529661 AKAP4Q5JQC9 854 aa7.89□□□□□ -1.15
C11orf88-204ENST00000529661 DNAJC14Q6Y2X3 702 aaPredicted RBP7.89□□□□□ -1.15
C11orf88-204ENST00000529661 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.89□□□□□ -1.15
C11orf88-204ENST00000529661 FAM20CQ8IXL6 584 aa7.89□□□□□ -1.15
C11orf88-204ENST00000529661 C12orf49Q9H741 205 aa7.89□□□□□ -1.15
C11orf88-204ENST00000529661 FBXO24O75426 580 aa7.88□□□□□ -1.15
C11orf88-204ENST00000529661 TIAF1O95411 115 aa7.88□□□□□ -1.15
C11orf88-204ENST00000529661 FSTP19883 344 aa7.88□□□□□ -1.15
C11orf88-204ENST00000529661 RXRBP28702 533 aa7.88□□□□□ -1.15
C11orf88-204ENST00000529661 SOX4Q06945 474 aaPredicted RBP7.88□□□□□ -1.15
C11orf88-204ENST00000529661 TPTE2Q6XPS3 522 aa7.88□□□□□ -1.15
C11orf88-204ENST00000529661 NPAS4Q8IUM7 802 aa7.88□□□□□ -1.15
C11orf88-204ENST00000529661 DUSP9Q99956 384 aaKnown RBP7.88□□□□□ -1.15
C11orf88-204ENST00000529661 C7orf69Q9H7B7 122 aa7.88□□□□□ -1.15
C11orf88-204ENST00000529661 HMX2A2RU54 273 aa7.87□□□□□ -1.15
C11orf88-204ENST00000529661 USP17L7P0C7H9 530 aa7.87□□□□□ -1.15
C11orf88-204ENST00000529661 ADH5P11766 374 aa7.87□□□□□ -1.15
C11orf88-204ENST00000529661 GNA15P30679 374 aa7.87□□□□□ -1.15
C11orf88-204ENST00000529661 USP11P51784 963 aa7.87□□□□□ -1.15
C11orf88-204ENST00000529661 COL19A1Q14993 1142 aa7.87□□□□□ -1.15
C11orf88-204ENST00000529661 SGO2Q562F6 1265 aa7.87□□□□□ -1.15
C11orf88-204ENST00000529661 BEND4Q6ZU67 534 aa7.87□□□□□ -1.15
C11orf88-204ENST00000529661 SULF2Q8IWU5 870 aa7.87□□□□□ -1.15
C11orf88-204ENST00000529661 TRIM42Q8IWZ5 723 aa7.87□□□□□ -1.15
C11orf88-204ENST00000529661 RNF19AQ9NV58 838 aa7.87□□□□□ -1.15
C11orf88-204ENST00000529661 FAM8A1Q9UBU6 413 aa7.87□□□□□ -1.15
C11orf88-204ENST00000529661 AP4E1Q9UPM8 1137 aa7.87□□□□□ -1.15
C11orf88-204ENST00000529661 HIF3AQ9Y2N7 669 aa7.87□□□□□ -1.15
C11orf88-204ENST00000529661 GSTP1P09211 210 aaKnown RBP7.86□□□□□ -1.15
C11orf88-204ENST00000529661 MAP4P27816 1152 aaKnown RBP7.86□□□□□ -1.15
C11orf88-204ENST00000529661 C2CD4AQ8NCU7 369 aaPredicted RBP7.86□□□□□ -1.15
C11orf88-204ENST00000529661 KCNB2Q92953 911 aa7.86□□□□□ -1.15
C11orf88-204ENST00000529661 CCDC86Q9H6F5 360 aaKnown RBP7.86□□□□□ -1.15
C11orf88-204ENST00000529661 AOC2O75106 756 aa7.85□□□□□ -1.15
C11orf88-204ENST00000529661 LIG1P18858 919 aa7.85□□□□□ -1.15
C11orf88-204ENST00000529661 EIF4BP23588 611 aaKnown RBP7.85□□□□□ -1.15
C11orf88-204ENST00000529661 FGD1P98174 961 aa7.85□□□□□ -1.15
C11orf88-204ENST00000529661 DYMQ7RTS9 669 aa7.85□□□□□ -1.15
C11orf88-204ENST00000529661 CLEC10AQ8IUN9 316 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms